FFCP PHASE1:Hg19::chr13:51617751..51617754,+: Difference between revisions
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|id=chr13:51617751..51617754,+
|short_description=p@chr13:51617751..51617754,+
|description=CAGE_peak_at_chr13:51617751..51617754,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:51617751..51617754,+ | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_at_chr13:51617751..51617754,+ | |||
|id=chr13:51617751..51617754,+ | |||
|ontology_enrichment_celltype=CL:0000242!5.94e-09!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!3.35e-32!2;UBERON:0002106!1.43e-21!3;UBERON:0004854!1.43e-21!3;UBERON:0009034!1.43e-21!3;UBERON:0002095!1.43e-21!3;UBERON:0004782!1.43e-21!3;UBERON:0003281!1.43e-21!3;UBERON:0009664!1.43e-21!3;UBERON:0002296!1.43e-21!3;UBERON:0005602!1.43e-21!3;UBERON:0001179!1.43e-21!3;UBERON:0006293!1.43e-21!3;UBERON:0004177!3.02e-20!7;UBERON:0000989!1.04e-16!1;UBERON:0008811!1.04e-16!1;UBERON:0006258!1.04e-16!1;UBERON:0005876!1.04e-16!1;UBERON:0004874!1.04e-16!1;UBERON:0003296!1.21e-16!4;UBERON:0010133!1.21e-16!4;UBERON:0001882!2.63e-16!1;UBERON:0005403!2.63e-16!1;UBERON:0007023!5.64e-10!115;UBERON:0001894!6.40e-10!7;UBERON:0006222!6.40e-10!7;UBERON:0001049!2.70e-09!57;UBERON:0005068!2.70e-09!57;UBERON:0006241!2.70e-09!57;UBERON:0007135!2.70e-09!57;UBERON:0002780!3.55e-09!41;UBERON:0001890!3.55e-09!41;UBERON:0006240!3.55e-09!41;UBERON:0002616!5.63e-09!59;UBERON:0003080!5.81e-09!42;UBERON:0000945!1.09e-08!8;UBERON:0010039!1.09e-08!8;UBERON:0001871!1.31e-08!7;UBERON:0000955!1.54e-07!69;UBERON:0006238!1.54e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.60e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0002780;4.73e-14;41!UBERON:0001890;4.73e-14;41!UBERON:0001871;9.89e-11;6!UBERON:0000073;7.53e-09;53!UBERON:0002616;7.53e-09;53!UBERON:0002368;1.20e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002780,3.52e-15,41;UBERON:0001890,3.52e-15,41;UBERON:0003080,3.52e-15,41;UBERON:0006240,3.52e-15,41;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001871,9.89e-11,6;UBERON:0003056,1.22e-10,61;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0002368,1.09e-08,35;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p@chr13:51617751..51617754,+ | |||
}} | }} |
Latest revision as of 16:43, 24 July 2015
Short description: | p@chr13:51617751..51617754, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:51617751..51617754, + |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
regional part of forebrain | 3.52e-15 | 41 |
forebrain | 3.52e-15 | 41 |
anterior neural tube | 3.52e-15 | 41 |
future forebrain | 3.52e-15 | 41 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
temporal lobe | 9.89e-11 | 6 |
pre-chordal neural plate | 1.22e-10 | 61 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
endocrine gland | 1.09e-08 | 35 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |
endocrine system | 5.42e-07 | 45 |