FFCP PHASE1:Hg19::chr2:196522032..196522052,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt=E7EV45 | |UniProt=E7EV45 | ||
|association_with_transcript=-120bp_to_ENST00000418005_5end | |association_with_transcript=-120bp_to_ENST00000418005_5end | ||
|cluster_id=chr2:196522032..196522052,+ | |||
|description=CAGE_peak_2_at_SLC39A10_5end | |description=CAGE_peak_2_at_SLC39A10_5end | ||
|id=chr2:196522032..196522052,+ | |id=chr2:196522032..196522052,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.28e-13!140;CL:0002087!4.91e-13!119;CL:0002031!4.94e-13!124;CL:0000988!1.40e-12!182;CL:0000037!1.95e-12!172;CL:0000566!1.95e-12!172;CL:0000791!5.34e-12!18;CL:0000789!5.34e-12!18;CL:0002420!5.34e-12!18;CL:0002419!5.34e-12!18;CL:0000790!5.34e-12!18;CL:0002032!5.76e-11!165;CL:0000837!5.76e-11!165;CL:0000838!2.73e-10!52;CL:0000542!2.83e-10!53;CL:0000051!2.83e-10!53;CL:0000625!2.08e-08!11;CL:0000084!5.68e-07!25;CL:0000827!5.68e-07!25 | |ontology_enrichment_celltype=CL:0000738!2.28e-13!140;CL:0002087!4.91e-13!119;CL:0002031!4.94e-13!124;CL:0000988!1.40e-12!182;CL:0000037!1.95e-12!172;CL:0000566!1.95e-12!172;CL:0000791!5.34e-12!18;CL:0000789!5.34e-12!18;CL:0002420!5.34e-12!18;CL:0002419!5.34e-12!18;CL:0000790!5.34e-12!18;CL:0002032!5.76e-11!165;CL:0000837!5.76e-11!165;CL:0000838!2.73e-10!52;CL:0000542!2.83e-10!53;CL:0000051!2.83e-10!53;CL:0000625!2.08e-08!11;CL:0000084!5.68e-07!25;CL:0000827!5.68e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.18e-12;18!CL:0000789;4.18e-12;18!CL:0002419;4.18e-12;18!CL:0000625;1.79e-08;11!CL:0000236;8.00e-07;13!CL:0000084;8.57e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.03e-12,136;CL:0000988,2.01e-12,177;CL:0002087,2.23e-12,115;CL:0002031,2.23e-12,120;CL:0000791,5.28e-12,18;CL:0000789,5.28e-12,18;CL:0002420,5.28e-12,18;CL:0002419,5.28e-12,18;CL:0000790,5.28e-12,18;CL:0000037,7.84e-12,168;CL:0002032,2.18e-10,161;CL:0000837,2.18e-10,161;CL:0000838,2.65e-10,52;CL:0000542,2.75e-10,53;CL:0000051,2.75e-10,53;CL:0000625,2.06e-08,11;CL:0000084,5.65e-07,25;CL:0000827,5.65e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;4.18e-12;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.55e-09!115;UBERON:0002390!3.76e-09!102;UBERON:0003061!3.76e-09!102;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0002616!4.74e-08!59;UBERON:0002193!1.94e-07!112;UBERON:0001893!2.16e-07!34;UBERON:0000178!3.35e-07!15;UBERON:0000179!3.35e-07!15;UBERON:0000463!3.35e-07!15;UBERON:0002020!3.45e-07!34;UBERON:0003528!3.45e-07!34;UBERON:0002791!4.51e-07!33;UBERON:0001869!7.36e-07!32;UBERON:0002780!9.42e-07!41;UBERON:0001890!9.42e-07!41;UBERON:0006240!9.42e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!3.55e-09!115;UBERON:0002390!3.76e-09!102;UBERON:0003061!3.76e-09!102;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0002616!4.74e-08!59;UBERON:0002193!1.94e-07!112;UBERON:0001893!2.16e-07!34;UBERON:0000178!3.35e-07!15;UBERON:0000179!3.35e-07!15;UBERON:0000463!3.35e-07!15;UBERON:0002020!3.45e-07!34;UBERON:0003528!3.45e-07!34;UBERON:0002791!4.51e-07!33;UBERON:0001869!7.36e-07!32;UBERON:0002780!9.42e-07!41;UBERON:0001890!9.42e-07!41;UBERON:0006240!9.42e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.50e-07;15!UBERON:0000179;2.50e-07;15!UBERON:0000463;2.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.49e-09,56;UBERON:0005068,5.49e-09,56;UBERON:0006241,5.49e-09,56;UBERON:0007135,5.49e-09,56;UBERON:0007023,5.75e-09,114;UBERON:0002390,1.58e-08,98;UBERON:0003061,1.58e-08,98;UBERON:0000073,2.10e-08,53;UBERON:0002616,2.10e-08,53;UBERON:0001893,2.15e-07,34;UBERON:0000178,3.33e-07,15;UBERON:0000179,3.33e-07,15;UBERON:0000463,3.33e-07,15;UBERON:0003528,3.43e-07,34;UBERON:0002020,3.43e-07,34;UBERON:0001869,7.32e-07,32;UBERON:0002193,7.58e-07,108;UBERON:0002791,8.23e-07,32;UBERON:0002780,9.37e-07,41;UBERON:0001890,9.37e-07,41;UBERON:0003080,9.37e-07,41;UBERON:0006240,9.37e-07,41 | |||
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| ||
|short_description=p2@SLC39A10 | |short_description=p2@SLC39A10 | ||
}} | }} |
Latest revision as of 06:11, 19 September 2015
Short description: | p2@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC39A10_5end |
Coexpression cluster: | NA |
Association with transcript: | -120bp_to_ENST00000418005_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | E7EV45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.03e-12 | 136 |
hematopoietic cell | 2.01e-12 | 177 |
nongranular leukocyte | 2.23e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.23e-12 | 120 |
mature alpha-beta T cell | 5.28e-12 | 18 |
alpha-beta T cell | 5.28e-12 | 18 |
immature T cell | 5.28e-12 | 18 |
mature T cell | 5.28e-12 | 18 |
immature alpha-beta T cell | 5.28e-12 | 18 |
hematopoietic stem cell | 7.84e-12 | 168 |
hematopoietic oligopotent progenitor cell | 2.18e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-10 | 161 |
lymphoid lineage restricted progenitor cell | 2.65e-10 | 52 |
lymphocyte | 2.75e-10 | 53 |
common lymphoid progenitor | 2.75e-10 | 53 |
CD8-positive, alpha-beta T cell | 2.06e-08 | 11 |
T cell | 5.65e-07 | 25 |
pro-T cell | 5.65e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.49e-09 | 56 |
neural rod | 5.49e-09 | 56 |
future spinal cord | 5.49e-09 | 56 |
neural keel | 5.49e-09 | 56 |
adult organism | 5.75e-09 | 114 |
hematopoietic system | 1.58e-08 | 98 |
blood island | 1.58e-08 | 98 |
regional part of nervous system | 2.10e-08 | 53 |
regional part of brain | 2.10e-08 | 53 |
telencephalon | 2.15e-07 | 34 |
blood | 3.33e-07 | 15 |
haemolymphatic fluid | 3.33e-07 | 15 |
organism substance | 3.33e-07 | 15 |
brain grey matter | 3.43e-07 | 34 |
gray matter | 3.43e-07 | 34 |
cerebral hemisphere | 7.32e-07 | 32 |
hemolymphoid system | 7.58e-07 | 108 |
regional part of telencephalon | 8.23e-07 | 32 |
regional part of forebrain | 9.37e-07 | 41 |
forebrain | 9.37e-07 | 41 |
anterior neural tube | 9.37e-07 | 41 |
future forebrain | 9.37e-07 | 41 |