FFCP PHASE1:Hg19::chr14:36982935..36982943,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:36982935..36982943,-
|short_description=p9@SFTA3
|description=CAGE_peak_9_at_SFTA3_5end
|association_with_transcript=36bp_to_ENST00000518446_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253970 | |EntrezGene=253970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18387 | |HGNC=18387 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG42 | |UniProt=E5RG42 | ||
|association_with_transcript=36bp_to_ENST00000518446_5end | |||
|cluster_id=chr14:36982935..36982943,- | |||
|coexpression_cluster_id=C2293 | |||
|description=CAGE_peak_9_at_SFTA3_5end | |||
|id=chr14:36982935..36982943,- | |||
|ontology_enrichment_celltype=CL:0002553!3.27e-12!1;CL:0000082!2.72e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.54e-29;1!CL:0000082;3.38e-14;19!CL:0000322;8.57e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.33e-29,1;CL:0000082,3.31e-14,19;CL:0000322,8.99e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.16e-35;29!UBERON:0001041;4.55e-34;30!UBERON:0007123;6.39e-07;5 | |||
|ontology_enrichment_disease=DOID:3112!9.61e-12!1;DOID:1324!1.01e-11!15;DOID:3905!2.51e-11!9;DOID:0050615!5.32e-11!16;DOID:3908!1.20e-09!5;DOID:1325!5.34e-07!7;DOID:3904!5.34e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:3908;1.02e-23;5!DOID:1324;9.02e-18;15!DOID:0050615;1.04e-16;16!DOID:3910;1.66e-15;2!DOID:3905;1.15e-13;9!DOID:4556;7.07e-11;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,1.02e-23,5;DOID:1324,8.77e-18,15;DOID:0050615,1.01e-16,16;DOID:3910,1.78e-15,2;DOID:3905,1.15e-13,9;DOID:4556,6.73e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.54e-34!5;UBERON:0004117!6.54e-34!5;UBERON:0007689!6.54e-34!5;UBERON:0007123!6.54e-34!5;UBERON:0003091!6.54e-34!5;UBERON:0002048!2.99e-23!22;UBERON:0000117!2.99e-23!22;UBERON:0000171!2.99e-23!22;UBERON:0000170!2.99e-23!22;UBERON:0005597!2.99e-23!22;UBERON:0000118!2.99e-23!22;UBERON:0005178!3.86e-19!34;UBERON:0002224!3.86e-19!34;UBERON:0005181!1.44e-18!35;UBERON:0005153!1.39e-17!37;UBERON:0008947!4.94e-17!38;UBERON:0003258!4.94e-17!38;UBERON:0005911!6.42e-17!82;UBERON:0009722!1.34e-15!11;UBERON:0007690!1.34e-15!11;UBERON:0005157!1.65e-12!51;UBERON:0000915!3.34e-12!52;UBERON:0002171!5.05e-12!1;UBERON:0006518!5.05e-12!1;UBERON:0008949!5.05e-12!1;UBERON:0000101!5.05e-12!1;UBERON:0002167!5.05e-12!1;UBERON:0000065!5.91e-12!53;UBERON:0008814!1.67e-11!15;UBERON:0001007!1.53e-09!155;UBERON:0001555!1.53e-09!155;UBERON:0007026!1.53e-09!155;UBERON:0004802!2.72e-09!19;UBERON:0000115!2.72e-09!19;UBERON:0004119!1.37e-08!169;UBERON:0000925!1.37e-08!169;UBERON:0006595!1.37e-08!169;UBERON:0001004!1.50e-08!72;UBERON:0002368!2.09e-07!35;UBERON:0001048!2.60e-07!168 | |||
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|short_description=p9@SFTA3 | |||
}} | }} |
Latest revision as of 22:20, 19 September 2015
Short description: | p9@SFTA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SFTA3_5end |
Coexpression cluster: | C2293_large_lung_nonsmall_throat_trachea_bronchioalveolar_thyroid |
Association with transcript: | 36bp_to_ENST00000518446_5end |
EntrezGene: | SFTA3 |
HGNC: | 18387 |
UniProt: | E5RG42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.33e-29 | 1 |
epithelial cell of lung | 3.31e-14 | 19 |
pneumocyte | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 1.02e-23 | 5 |
lung cancer | 8.77e-18 | 15 |
respiratory system cancer | 1.01e-16 | 16 |
lung adenocarcinoma | 1.78e-15 | 2 |
lung carcinoma | 1.15e-13 | 9 |
lung large cell carcinoma | 6.73e-11 | 3 |