FFCP PHASE1:Hg19::chr14:52327379..52327396,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52327379..52327396,+
|short_description=p4@GNG2
|description=CAGE_peak_4_at_GNG2_5end
|association_with_transcript=15bp_to_ENST00000556766_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54331 | |EntrezGene=54331 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |HGNC=4404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000556766_5end | |||
|cluster_id=chr14:52327379..52327396,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_GNG2_5end | |||
|id=chr14:52327379..52327396,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.70e-41!140;CL:0000037!4.37e-34!172;CL:0000566!4.37e-34!172;CL:0002031!4.55e-32!124;CL:0002032!2.00e-31!165;CL:0000837!2.00e-31!165;CL:0000988!1.03e-30!182;CL:0002087!1.11e-30!119;CL:0002057!8.05e-25!42;CL:0000766!1.79e-21!76;CL:0000860!4.50e-21!45;CL:0000557!6.53e-18!71;CL:0000763!1.15e-16!112;CL:0000049!1.15e-16!112;CL:0000839!1.37e-16!70;CL:0002009!1.02e-15!65;CL:0002194!1.05e-14!63;CL:0000576!1.05e-14!63;CL:0000040!1.05e-14!63;CL:0000559!1.05e-14!63;CL:0000542!2.14e-14!53;CL:0000051!2.14e-14!53;CL:0000134!2.53e-14!358;CL:0000219!3.10e-14!390;CL:0000838!4.00e-14!52;CL:0000048!2.17e-13!430;CL:0002320!2.75e-13!365;CL:0000034!1.19e-12!444;CL:0000723!2.46e-12!436;CL:0000084!7.96e-11!25;CL:0000827!7.96e-11!25;CL:0000791!5.73e-10!18;CL:0000789!5.73e-10!18;CL:0002420!5.73e-10!18;CL:0002419!5.73e-10!18;CL:0000790!5.73e-10!18;CL:0000094!8.25e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.82e-19;33!CL:0002057;1.82e-19;33!CL:0000473;3.29e-15;39!CL:0000234;3.29e-15;39!CL:0000576;4.04e-15;48!CL:0000766;2.62e-13;69!CL:0002087;6.37e-13;104!CL:0000084;4.74e-11;25!CL:0000791;1.76e-10;18!CL:0000789;1.76e-10;18!CL:0002419;1.76e-10;18!CL:0000738;2.94e-10;136!CL:0000542;7.98e-09;53!CL:0000988;9.96e-08;177!CL:0000094;3.85e-07;8!CL:0000763;4.64e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.59e-47,136;CL:0000037,2.89e-39,168;CL:0002031,5.28e-37,120;CL:0002032,2.29e-36,161;CL:0000837,2.29e-36,161;CL:0000988,1.13e-35,177;CL:0002087,1.56e-35,115;CL:0000860,3.53e-26,42;CL:0002057,3.53e-26,42;CL:0000766,4.88e-26,72;CL:0000473,1.35e-24,48;CL:0000234,1.35e-24,48;CL:0000557,5.18e-22,67;CL:0000839,1.77e-20,66;CL:0000763,2.75e-20,108;CL:0000049,2.75e-20,108;CL:0002009,1.34e-19,61;CL:0002194,1.88e-18,59;CL:0000576,1.88e-18,59;CL:0000040,1.88e-18,59;CL:0000559,1.88e-18,59;CL:0000542,4.16e-15,53;CL:0000051,4.16e-15,53;CL:0000838,8.06e-15,52;CL:0000134,4.58e-14,354;CL:0000219,1.36e-13,386;CL:0002320,7.16e-13,361;CL:0000048,1.66e-11,427;CL:0000084,4.62e-11,25;CL:0000827,4.62e-11,25;CL:0000034,9.46e-11,441;CL:0000723,1.04e-10,433;CL:0000791,1.86e-10,18;CL:0000789,1.86e-10,18;CL:0002420,1.86e-10,18;CL:0002419,1.86e-10,18;CL:0000790,1.86e-10,18;CL:0000094,4.06e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.66e-19;42!CL:0000790;1.76e-10;18!CL:0000051;7.98e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.80e-20!102;UBERON:0003061!1.80e-20!102;UBERON:0002193!2.88e-19!112;UBERON:0002371!1.72e-14!80;UBERON:0001474!2.26e-13!86;UBERON:0002384!9.51e-13!375;UBERON:0004765!1.14e-10!101;UBERON:0001434!1.14e-10!101;UBERON:0002405!6.43e-09!115;UBERON:0007023!9.26e-09!115;UBERON:0002619!1.84e-07!22;UBERON:0001017!2.29e-07!82;UBERON:0001049!2.97e-07!57;UBERON:0005068!2.97e-07!57;UBERON:0006241!2.97e-07!57;UBERON:0007135!2.97e-07!57;UBERON:0001950!8.22e-07!20;UBERON:0000956!9.94e-07!25;UBERON:0000203!9.94e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-07;22!UBERON:0000956;4.34e-07;25!UBERON:0000203;4.34e-07;25!UBERON:0001950;5.57e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.46e-24,98;UBERON:0003061,2.46e-24,98;UBERON:0002193,5.25e-22,108;UBERON:0002371,1.13e-17,76;UBERON:0002405,2.75e-17,93;UBERON:0001474,3.32e-16,82;UBERON:0004765,7.70e-13,90;UBERON:0002384,1.39e-12,371;UBERON:0001434,4.62e-11,100;UBERON:0007023,7.47e-08,114;UBERON:0002619,8.32e-08,22;UBERON:0001950,4.05e-07,20;UBERON:0000956,4.95e-07,25;UBERON:0000203,4.95e-07,25 | |||
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| ||
|short_description=p4@GNG2 | |||
}} | }} |
Latest revision as of 05:39, 20 September 2015
Short description: | p4@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GNG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 15bp_to_ENST00000556766_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.46e-24 | 98 |
blood island | 2.46e-24 | 98 |
hemolymphoid system | 5.25e-22 | 108 |
bone marrow | 1.13e-17 | 76 |
immune system | 2.75e-17 | 93 |
bone element | 3.32e-16 | 82 |
skeletal element | 7.70e-13 | 90 |
connective tissue | 1.39e-12 | 371 |
skeletal system | 4.62e-11 | 100 |
adult organism | 7.47e-08 | 114 |
regional part of cerebral cortex | 8.32e-08 | 22 |
neocortex | 4.05e-07 | 20 |
cerebral cortex | 4.95e-07 | 25 |
pallium | 4.95e-07 | 25 |