FFCP PHASE1:Hg19::chrX:132887732..132887744,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2719 | |EntrezGene=2719 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4451 | |HGNC=4451 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000406757_5end | |association_with_transcript=-3bp_to_ENST00000406757_5end | ||
|cluster_id=chrX:132887732..132887744,- | |||
|coexpression_cluster_id=C786 | |||
|description=CAGE_peak_9_at_GPC3_5end | |description=CAGE_peak_9_at_GPC3_5end | ||
|id=chrX:132887732..132887744,- | |id=chrX:132887732..132887744,- | ||
|ontology_enrichment_celltype=CL:0002322!9.20e-14!5;CL:0002617!7.33e-09!2 | |ontology_enrichment_celltype=CL:0002322!9.20e-14!5;CL:0002617!7.33e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.19e-19;12!CL:0002563;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-19,12;CL:0002563,1.92e-07,4;CL:0000223,2.67e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.96e-36;11!UBERON:0009497;6.20e-31;13!UBERON:0003104;7.07e-29;31!UBERON:0003099;6.72e-26;1!UBERON:0003852;6.72e-26;1!UBERON:0001041;1.01e-13;30!UBERON:0005062;1.75e-07;4!UBERON:0007284;1.75e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;9.41e-07;39 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
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| ||
|short_description=p9@GPC3 | |short_description=p9@GPC3 | ||
}} | }} |
Latest revision as of 12:12, 19 September 2015
Short description: | p9@GPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GPC3_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | -3bp_to_ENST00000406757_5end |
EntrezGene: | GPC3 |
HGNC: | 4451 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-19 | 12 |
intestinal epithelial cell | 1.92e-07 | 4 |
endodermal cell | 2.67e-07 | 58 |