FFCP PHASE1:Hg19::chrX:82763261..82763262,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5456 | |EntrezGene=5456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9217 | |HGNC=9217 | ||
|TSSclassifier=strong | |||
|UniProt=P49335,B2RC71 | |UniProt=P49335,B2RC71 | ||
|association_with_transcript=-6bp_to_ENST00000373200,NM_000307,uc004eeg.2_5end | |association_with_transcript=-6bp_to_ENST00000373200,NM_000307,uc004eeg.2_5end | ||
|cluster_id=chrX:82763261..82763262,+ | |||
|coexpression_cluster_id=C1309 | |||
|description=CAGE_peak_4_at_POU3F4_5end | |description=CAGE_peak_4_at_POU3F4_5end | ||
|id=chrX:82763261..82763262,+ | |id=chrX:82763261..82763262,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.66e-16!7;CL:0000126!1.66e-16!7;CL:0000127!1.66e-16!7;CL:0002453!1.66e-16!7;CL:0002319!1.91e-15!25;CL:0002605!1.06e-14!3;CL:0000047!8.99e-10!8;CL:0000095!3.36e-08!17;CL:0000123!3.36e-08!17;CL:0000540!7.85e-08!6;CL:0000031!7.85e-08!6;CL:0000404!7.85e-08!6;CL:0002603!4.26e-07!3 | |ontology_enrichment_celltype=CL:0000128!1.66e-16!7;CL:0000126!1.66e-16!7;CL:0000127!1.66e-16!7;CL:0002453!1.66e-16!7;CL:0002319!1.91e-15!25;CL:0002605!1.06e-14!3;CL:0000047!8.99e-10!8;CL:0000095!3.36e-08!17;CL:0000123!3.36e-08!17;CL:0000540!7.85e-08!6;CL:0000031!7.85e-08!6;CL:0000404!7.85e-08!6;CL:0002603!4.26e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;6.30e-26;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-64!57;UBERON:0005068!1.67e-64!57;UBERON:0006241!1.67e-64!57;UBERON:0007135!1.67e-64!57;UBERON:0001017!4.28e-60!82;UBERON:0005743!5.03e-57!86;UBERON:0002616!1.78e-53!59;UBERON:0000073!4.83e-51!94;UBERON:0001016!4.83e-51!94;UBERON:0002780!5.70e-48!41;UBERON:0001890!5.70e-48!41;UBERON:0006240!5.70e-48!41;UBERON:0000955!6.76e-48!69;UBERON:0006238!6.76e-48!69;UBERON:0001893!6.99e-48!34;UBERON:0002020!7.18e-48!34;UBERON:0003528!7.18e-48!34;UBERON:0003080!9.84e-47!42;UBERON:0001869!5.40e-46!32;UBERON:0002791!1.49e-44!33;UBERON:0003075!9.53e-41!86;UBERON:0007284!9.53e-41!86;UBERON:0002346!1.17e-38!90;UBERON:0000956!4.00e-31!25;UBERON:0000203!4.00e-31!25;UBERON:0003056!8.23e-31!61;UBERON:0004121!2.79e-27!169;UBERON:0000924!1.73e-26!173;UBERON:0006601!1.73e-26!173;UBERON:0000033!2.54e-26!123;UBERON:0000153!8.34e-25!129;UBERON:0007811!8.34e-25!129;UBERON:0002619!1.57e-21!22;UBERON:0000369!3.55e-20!4;UBERON:0002435!3.55e-20!4;UBERON:0000204!3.55e-20!4;UBERON:0010082!3.55e-20!4;UBERON:0001950!1.14e-19!20;UBERON:0002420!9.13e-19!9;UBERON:0007245!9.13e-19!9;UBERON:0010009!9.13e-19!9;UBERON:0010011!9.13e-19!9;UBERON:0000454!9.13e-19!9;UBERON:0002308!1.45e-18!9;UBERON:0000125!1.45e-18!9;UBERON:0003076!3.86e-18!15;UBERON:0003057!3.86e-18!15;UBERON:0009663!3.20e-17!7;UBERON:0000025!4.50e-17!194;UBERON:0005383!1.03e-15!3;UBERON:0005382!1.03e-15!3;UBERON:0007023!1.98e-15!115;UBERON:0004733!6.24e-13!12;UBERON:0002028!6.24e-13!12;UBERON:0007277!6.24e-13!12;UBERON:0004111!2.18e-12!241;UBERON:0004732!6.82e-12!13;UBERON:0001873!5.03e-11!2;UBERON:0010122!5.03e-11!2;UBERON:0000477!3.19e-10!286;UBERON:0000064!6.79e-10!219;UBERON:0001871!1.85e-09!7;UBERON:0002298!4.36e-09!8;UBERON:0000483!6.19e-09!309;UBERON:0000349!7.06e-09!5;UBERON:0000119!8.82e-09!312;UBERON:0001872!1.42e-08!5;UBERON:0002680!3.96e-08!9;UBERON:0001895!3.96e-08!9;UBERON:0010092!3.96e-08!9;UBERON:0000475!7.32e-08!365;UBERON:0002037!2.54e-07!6;UBERON:0006215!2.54e-07!6;UBERON:0002240!3.23e-07!3;UBERON:0000200!3.93e-07!6;UBERON:0001896!5.96e-07!3;UBERON:0005290!5.96e-07!3;UBERON:0010096!5.96e-07!3;UBERON:0006331!9.07e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0005383;3.35e-66;3!UBERON:0005382;3.35e-66;3!UBERON:0001874;3.10e-50;1!UBERON:0000369;5.13e-50;4!UBERON:0002435;5.13e-50;4!UBERON:0000204;5.13e-50;4!UBERON:0009663;3.65e-29;7!UBERON:0001873;6.30e-26;2!UBERON:0002420;5.74e-23;9!UBERON:0000125;5.74e-23;9!UBERON:0007245;5.74e-23;9!UBERON:0002308;5.74e-23;9!UBERON:0010009;5.74e-23;9!UBERON:0010011;5.74e-23;9!UBERON:0000454;5.74e-23;9!UBERON:0002791;6.32e-15;32!UBERON:0000955;2.72e-14;68!UBERON:0001869;2.60e-13;32!UBERON:0001893;2.60e-13;34!UBERON:0001017;2.39e-12;75!UBERON:0003528;1.07e-11;34!UBERON:0002020;1.07e-11;34!UBERON:0002780;2.11e-10;41!UBERON:0001890;2.11e-10;41!UBERON:0001871;2.11e-08;6!UBERON:0000073;6.34e-08;53!UBERON:0002616;6.34e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005383,3.35e-66,3;UBERON:0005382,3.35e-66,3;UBERON:0001874,2.42e-50,1;UBERON:0000369,5.14e-50,4;UBERON:0002435,5.14e-50,4;UBERON:0000204,5.14e-50,4;UBERON:0010082,5.14e-50,4;UBERON:0009663,3.65e-29,7;UBERON:0001873,7.14e-26,2;UBERON:0010122,7.14e-26,2;UBERON:0002420,5.74e-23,9;UBERON:0000125,5.74e-23,9;UBERON:0007245,5.74e-23,9;UBERON:0002308,5.74e-23,9;UBERON:0010009,5.74e-23,9;UBERON:0010011,5.74e-23,9;UBERON:0000454,5.74e-23,9;UBERON:0002791,2.31e-14,32;UBERON:0001869,2.31e-14,32;UBERON:0003528,1.35e-13,34;UBERON:0002020,1.35e-13,34;UBERON:0001893,1.35e-13,34;UBERON:0000955,3.68e-12,68;UBERON:0006238,3.68e-12,68;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0001017,2.17e-10,81;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0001871,2.35e-08,6;UBERON:0003056,4.61e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0,0.572471974262113,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.495056999523528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.5677537021303,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,1.88538707899202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@POU3F4 | |short_description=p4@POU3F4 | ||
}} | }} |
Latest revision as of 13:05, 16 September 2015
Short description: | p4@POU3F4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POU3F4_5end |
Coexpression cluster: | C1309_putamen_parietal_caudate_temporal_duodenum_Neurons_occipital |
Association with transcript: | -6bp_to_ENST00000373200, NM_000307, uc004eeg.2_5end |
EntrezGene: | POU3F4 |
HGNC: | 9217 |
UniProt: | P49335B2RC71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data