FFCP PHASE1:Hg19::chr4:145567538..145567544,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64399 | |EntrezGene=64399 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14866 | |HGNC=14866 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=214bp_to_ENST00000434550_5end | |association_with_transcript=214bp_to_ENST00000434550_5end | ||
|cluster_id=chr4:145567538..145567544,+ | |||
|coexpression_cluster_id=C606 | |||
|description=CAGE_peak_13_at_HHIP_5end | |description=CAGE_peak_13_at_HHIP_5end | ||
|id=chr4:145567538..145567544,+ | |id=chr4:145567538..145567544,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.87e-29!24;CL:0000071!2.96e-23!18;CL:0002546!2.96e-23!18;CL:0000115!1.40e-19!35;CL:0002078!5.78e-17!44;CL:1000413!2.92e-16!9;CL:0000222!4.88e-16!119;CL:0000213!2.26e-11!57;CL:0000215!2.26e-11!57;CL:0002544!3.09e-11!6;CL:0000359!1.27e-10!32;CL:0002494!1.04e-08!16;CL:0000220!2.17e-07!246;CL:0005020!2.67e-07!6;CL:0002138!2.67e-07!6;CL:0005022!2.67e-07!6;CL:0002321!3.20e-07!248;CL:0002594!3.38e-07!4;CL:0000192!4.97e-07!42;CL:0000514!4.97e-07!42 | |ontology_enrichment_celltype=CL:0002139!5.87e-29!24;CL:0000071!2.96e-23!18;CL:0002546!2.96e-23!18;CL:0000115!1.40e-19!35;CL:0002078!5.78e-17!44;CL:1000413!2.92e-16!9;CL:0000222!4.88e-16!119;CL:0000213!2.26e-11!57;CL:0000215!2.26e-11!57;CL:0002544!3.09e-11!6;CL:0000359!1.27e-10!32;CL:0002494!1.04e-08!16;CL:0000220!2.17e-07!246;CL:0005020!2.67e-07!6;CL:0002138!2.67e-07!6;CL:0005022!2.67e-07!6;CL:0002321!3.20e-07!248;CL:0002594!3.38e-07!4;CL:0000192!4.97e-07!42;CL:0000514!4.97e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000071;5.16e-35;18!CL:1000413;3.51e-32;9!CL:0002139;5.97e-32;24!CL:0000115;4.07e-20;36!CL:0000359;4.86e-18;32!CL:0002545;1.16e-17;2!CL:0002544;7.49e-13;6!CL:0000192;6.22e-12;43!CL:0002592;8.82e-12;3!CL:0002078;3.61e-11;45!CL:1000306;5.51e-09;4!CL:0002547;5.51e-09;4!CL:0000076;7.09e-08;63!CL:0000213;1.20e-07;58!CL:0000215;1.20e-07;58!CL:0002595;2.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,7.44e-35,18;CL:0002546,7.44e-35,18;CL:1000413,5.73e-32,9;CL:0002139,1.02e-31,24;CL:0000115,1.23e-20,36;CL:0000222,1.65e-20,121;CL:0000359,7.17e-19,32;CL:0002545,1.07e-17,2;CL:0002078,3.39e-16,45;CL:0000192,1.04e-13,43;CL:0000514,1.04e-13,43;CL:0002544,9.16e-13,6;CL:0000213,3.26e-12,58;CL:0000215,3.26e-12,58;CL:0002592,7.11e-12,3;CL:0000187,1.98e-10,55;CL:0000680,8.01e-10,58;CL:0000056,8.01e-10,58;CL:0000355,8.01e-10,58;CL:0000393,2.83e-09,61;CL:0000211,2.83e-09,61;CL:1000306,4.51e-09,4;CL:0002547,4.51e-09,4;CL:0000076,5.04e-09,63;CL:0002321,4.41e-08,250;CL:0002595,2.28e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;5.16e-35;18!CL:0000514;6.22e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;8.67e-10;1!DOID:4549;8.67e-10;1!DOID:5861;8.67e-10;1!DOID:6496;8.67e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.68e-10,1;DOID:4549,8.68e-10,1;DOID:5861,8.68e-10,1;DOID:6496,8.68e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-44;42!UBERON:0003509;1.16e-44;42!UBERON:0004572;1.16e-44;42!UBERON:0004638;5.16e-35;18!UBERON:0001986;5.16e-35;18!UBERON:0004852;5.16e-35;18!UBERON:0004573;1.62e-33;33!UBERON:0004571;1.62e-33;33!UBERON:0003915;3.51e-32;9!UBERON:0004700;3.51e-32;9!UBERON:0001917;3.51e-32;9!UBERON:0007500;7.45e-31;56!UBERON:0001981;7.45e-31;56!UBERON:0004537;7.45e-31;56!UBERON:0000487;2.02e-28;22!UBERON:0006914;7.38e-25;25!UBERON:0000055;1.15e-24;65!UBERON:0003914;8.27e-21;74!UBERON:0002049;3.59e-18;75!UBERON:0007798;3.59e-18;75!UBERON:0000947;5.60e-18;21!UBERON:0010191;5.60e-18;21!UBERON:0005800;1.16e-17;2!UBERON:0001515;1.16e-17;2!UBERON:0000490;1.04e-16;33!UBERON:0003498;8.82e-12;3!UBERON:0005985;8.82e-12;3!UBERON:0001621;8.82e-12;3!UBERON:0000025;3.90e-11;93!UBERON:0001009;1.58e-09;112!UBERON:0002171;3.25e-09;1!UBERON:0006518;3.25e-09;1!UBERON:0008949;3.25e-09;1!UBERON:0000101;3.25e-09;1!UBERON:0002167;3.25e-09;1!UBERON:0004797;5.51e-09;4!UBERON:0000415;5.51e-09;4!UBERON:0007240;5.51e-09;4!UBERON:0005742;5.51e-09;4!UBERON:0005734;5.51e-09;4!UBERON:0004664;5.51e-09;4!UBERON:0004663;5.51e-09;4!UBERON:0004535;1.10e-08;109!UBERON:0004111;7.90e-08;130!UBERON:0003834;2.36e-07;5!UBERON:0001533;2.36e-07;5!UBERON:0000119;6.60e-07;139 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.23e-52,42;UBERON:0003509,4.23e-52,42;UBERON:0004572,4.23e-52,42;UBERON:0007500,7.65e-51,59;UBERON:0001981,7.65e-51,59;UBERON:0004537,7.65e-51,59;UBERON:0006965,7.65e-51,59;UBERON:0000055,2.84e-48,68;UBERON:0002049,1.19e-41,78;UBERON:0007798,1.19e-41,78;UBERON:0004872,5.78e-39,83;UBERON:0004573,8.71e-39,33;UBERON:0004571,8.71e-39,33;UBERON:0004638,7.44e-35,18;UBERON:0001986,7.44e-35,18;UBERON:0004852,7.44e-35,18;UBERON:0003915,5.73e-32,9;UBERON:0004700,5.73e-32,9;UBERON:0001917,5.73e-32,9;UBERON:0004535,7.61e-32,109;UBERON:0001009,6.75e-31,112;UBERON:0000487,2.72e-28,22;UBERON:0003914,1.23e-26,117;UBERON:0006914,9.56e-25,25;UBERON:0000947,4.33e-18,21;UBERON:0010191,4.33e-18,21;UBERON:0005800,1.07e-17,2;UBERON:0001515,1.07e-17,2;UBERON:0000025,1.94e-16,192;UBERON:0000490,2.46e-14,148;UBERON:0004111,7.94e-14,240;UBERON:0003081,9.39e-14,203;UBERON:0001621,7.11e-12,3;UBERON:0002171,3.25e-09,1;UBERON:0006518,3.25e-09,1;UBERON:0008949,3.25e-09,1;UBERON:0000101,3.25e-09,1;UBERON:0002167,3.25e-09,1;UBERON:0001134,4.20e-09,62;UBERON:0002036,4.20e-09,62;UBERON:0003082,4.20e-09,62;UBERON:0000415,4.51e-09,4;UBERON:0007240,4.51e-09,4;UBERON:0005742,4.51e-09,4;UBERON:0005734,4.51e-09,4;UBERON:0004664,4.51e-09,4;UBERON:0004663,4.51e-09,4;UBERON:0000483,6.24e-09,306;UBERON:0000119,8.30e-09,309;UBERON:0002385,8.88e-09,64;UBERON:0001015,8.88e-09,64;UBERON:0000383,8.88e-09,64;UBERON:0002329,8.79e-08,71;UBERON:0003059,8.79e-08,71;UBERON:0007282,8.79e-08,71;UBERON:0004290,8.79e-08,71;UBERON:0009618,8.79e-08,71;UBERON:0003077,1.18e-07,72;UBERON:0007285,1.18e-07,72;UBERON:0000926,1.45e-07,315;UBERON:0004120,1.45e-07,315;UBERON:0006603,1.45e-07,315;UBERON:0007524,1.56e-07,73;UBERON:0003498,1.83e-07,5;UBERON:0005985,1.83e-07,5;UBERON:0003834,2.28e-07,5;UBERON:0001533,2.28e-07,5;UBERON:0007503,5.76e-07,78 | |||
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|short_description=p13@HHIP | |short_description=p13@HHIP | ||
}} | }} |
Latest revision as of 22:32, 15 September 2015
Short description: | p13@HHIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_HHIP_5end |
Coexpression cluster: | C606_Endothelial_extraskeletal_Smooth_mesothelioma_Lymphatic_Fibroblast_lung |
Association with transcript: | 214bp_to_ENST00000434550_5end |
EntrezGene: | HHIP |
HGNC: | 14866 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 7.44e-35 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.44e-35 | 18 |
endothelial cell of artery | 5.73e-32 | 9 |
endothelial cell of vascular tree | 1.02e-31 | 24 |
endothelial cell | 1.23e-20 | 36 |
mesodermal cell | 1.65e-20 | 121 |
vascular associated smooth muscle cell | 7.17e-19 | 32 |
thoracic aorta endothelial cell | 1.07e-17 | 2 |
meso-epithelial cell | 3.39e-16 | 45 |
smooth muscle cell | 1.04e-13 | 43 |
smooth muscle myoblast | 1.04e-13 | 43 |
aortic endothelial cell | 9.16e-13 | 6 |
lining cell | 3.26e-12 | 58 |
barrier cell | 3.26e-12 | 58 |
smooth muscle cell of the coronary artery | 7.11e-12 | 3 |
muscle cell | 1.98e-10 | 55 |
muscle precursor cell | 8.01e-10 | 58 |
myoblast | 8.01e-10 | 58 |
multi-potent skeletal muscle stem cell | 8.01e-10 | 58 |
electrically responsive cell | 2.83e-09 | 61 |
electrically active cell | 2.83e-09 | 61 |
fibroblast of tunica adventitia of artery | 4.51e-09 | 4 |
fibroblast of the aortic adventitia | 4.51e-09 | 4 |
squamous epithelial cell | 5.04e-09 | 63 |
embryonic cell | 4.41e-08 | 250 |
smooth muscle cell of the subclavian artery | 2.28e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.68e-10 | 1 |
extraosseous chondrosarcoma | 8.68e-10 | 1 |
myxoid chondrosarcoma | 8.68e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 8.68e-10 | 1 |