FFCP PHASE1:Hg19::chr15:57025675..57025718,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:57025675..57025718,-
|short_description=p1@ZNF280D
|description=CAGE_peak_1_at_ZNF280D_5end
|association_with_transcript=0bp_to_ENST00000558002,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54816 | |EntrezGene=54816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25953 | |HGNC=25953 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558002,ENST00000558320_5end | |||
|cluster_id=chr15:57025675..57025718,- | |||
|description=CAGE_peak_1_at_ZNF280D_5end | |||
|id=chr15:57025675..57025718,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.27e-23!115;UBERON:0001017!4.08e-15!82;UBERON:0001049!4.88e-15!57;UBERON:0005068!4.88e-15!57;UBERON:0006241!4.88e-15!57;UBERON:0007135!4.88e-15!57;UBERON:0000073!7.69e-15!94;UBERON:0001016!7.69e-15!94;UBERON:0005743!2.24e-14!86;UBERON:0002616!1.53e-13!59;UBERON:0003080!2.88e-13!42;UBERON:0002780!3.60e-13!41;UBERON:0001890!3.60e-13!41;UBERON:0006240!3.60e-13!41;UBERON:0000955!1.03e-12!69;UBERON:0006238!1.03e-12!69;UBERON:0001893!9.28e-11!34;UBERON:0002020!1.19e-10!34;UBERON:0003528!1.19e-10!34;UBERON:0002346!1.28e-10!90;UBERON:0002791!1.66e-10!33;UBERON:0001869!4.38e-10!32;UBERON:0003075!1.71e-09!86;UBERON:0007284!1.71e-09!86;UBERON:0000153!6.36e-09!129;UBERON:0007811!6.36e-09!129;UBERON:0002619!1.76e-08!22;UBERON:0000924!2.00e-08!173;UBERON:0006601!2.00e-08!173;UBERON:0000956!2.71e-08!25;UBERON:0000203!2.71e-08!25;UBERON:0000033!4.72e-08!123;UBERON:0001950!8.30e-08!20;UBERON:0004121!1.43e-07!169;UBERON:0003056!5.37e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.08e-10;41!UBERON:0001890;9.08e-10;41!UBERON:0002791;3.01e-09;32!UBERON:0001893;3.49e-09;34!UBERON:0001869;3.77e-09;32!UBERON:0003528;4.75e-09;34!UBERON:0002020;4.75e-09;34!UBERON:0000073;9.81e-09;53!UBERON:0002616;9.81e-09;53!UBERON:0002619;1.83e-08;22!UBERON:0000956;3.12e-08;25!UBERON:0000203;3.12e-08;25!UBERON:0001950;8.62e-08;20!UBERON:0007023;4.74e-07;114!UBERON:0001016;7.84e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.24e-22,114;UBERON:0001016,2.14e-15,89;UBERON:0001017,5.57e-15,81;UBERON:0001049,6.35e-15,56;UBERON:0005068,6.35e-15,56;UBERON:0006241,6.35e-15,56;UBERON:0007135,6.35e-15,56;UBERON:0011216,3.45e-14,223;UBERON:0000073,7.30e-14,53;UBERON:0002616,7.30e-14,53;UBERON:0002780,3.60e-13,41;UBERON:0001890,3.60e-13,41;UBERON:0003080,3.60e-13,41;UBERON:0006240,3.60e-13,41;UBERON:0000955,1.39e-12,68;UBERON:0006238,1.39e-12,68;UBERON:0001893,9.28e-11,34;UBERON:0003528,1.19e-10,34;UBERON:0002020,1.19e-10,34;UBERON:0002346,1.47e-10,86;UBERON:0002791,3.66e-10,32;UBERON:0001869,4.38e-10,32;UBERON:0003075,2.00e-09,82;UBERON:0007284,2.00e-09,82;UBERON:0004121,1.11e-08,171;UBERON:0000924,1.11e-08,171;UBERON:0006601,1.11e-08,171;UBERON:0002619,1.76e-08,22;UBERON:0000956,2.71e-08,25;UBERON:0000203,2.71e-08,25;UBERON:0001950,8.30e-08,20;UBERON:0010314,2.60e-07,132;UBERON:0003056,7.03e-07,61 | |||
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| ||
|short_description=p1@ZNF280D | |||
}} | }} |
Latest revision as of 05:42, 18 September 2015
Short description: | p1@ZNF280D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF280D_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000558002, ENST00000558320_5end |
EntrezGene: | ZNF280D |
HGNC: | 25953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.24e-22 | 114 |
nervous system | 2.14e-15 | 89 |
central nervous system | 5.57e-15 | 81 |
neural tube | 6.35e-15 | 56 |
neural rod | 6.35e-15 | 56 |
future spinal cord | 6.35e-15 | 56 |
neural keel | 6.35e-15 | 56 |
organ system subdivision | 3.45e-14 | 223 |
regional part of nervous system | 7.30e-14 | 53 |
regional part of brain | 7.30e-14 | 53 |
regional part of forebrain | 3.60e-13 | 41 |
forebrain | 3.60e-13 | 41 |
anterior neural tube | 3.60e-13 | 41 |
future forebrain | 3.60e-13 | 41 |
brain | 1.39e-12 | 68 |
future brain | 1.39e-12 | 68 |
telencephalon | 9.28e-11 | 34 |
brain grey matter | 1.19e-10 | 34 |
gray matter | 1.19e-10 | 34 |
neurectoderm | 1.47e-10 | 86 |
regional part of telencephalon | 3.66e-10 | 32 |
cerebral hemisphere | 4.38e-10 | 32 |
neural plate | 2.00e-09 | 82 |
presumptive neural plate | 2.00e-09 | 82 |
ectoderm-derived structure | 1.11e-08 | 171 |
ectoderm | 1.11e-08 | 171 |
presumptive ectoderm | 1.11e-08 | 171 |
regional part of cerebral cortex | 1.76e-08 | 22 |
cerebral cortex | 2.71e-08 | 25 |
pallium | 2.71e-08 | 25 |
neocortex | 8.30e-08 | 20 |
structure with developmental contribution from neural crest | 2.60e-07 | 132 |
pre-chordal neural plate | 7.03e-07 | 61 |