FFCP PHASE1:Hg19::chr15:67835005..67835109,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:67835005..67835109,+
|short_description=p1@MAP2K5
|description=CAGE_peak_1_at_MAP2K5_5end
|association_with_transcript=0bp_to_ENST00000178640,ENST00000395...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5607 | |EntrezGene=5607 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6845 | |HGNC=6845 | ||
|TSSclassifier=strong | |||
|UniProt=Q13163,F5GZJ5 | |UniProt=Q13163,F5GZJ5 | ||
|association_with_transcript=0bp_to_ENST00000178640,ENST00000395476,ENST00000541298,NM_002757,NM_145160,uc002aqt.1,uc002aqu.2,uc002aqv.2_5end | |||
|cluster_id=chr15:67835005..67835109,+ | |||
|description=CAGE_peak_1_at_MAP2K5_5end | |||
|id=chr15:67835005..67835109,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-30!115;UBERON:0001049!4.71e-21!57;UBERON:0005068!4.71e-21!57;UBERON:0006241!4.71e-21!57;UBERON:0007135!4.71e-21!57;UBERON:0003080!5.82e-18!42;UBERON:0002346!1.38e-17!90;UBERON:0003075!2.10e-17!86;UBERON:0007284!2.10e-17!86;UBERON:0002780!2.39e-17!41;UBERON:0001890!2.39e-17!41;UBERON:0006240!2.39e-17!41;UBERON:0000955!3.23e-17!69;UBERON:0006238!3.23e-17!69;UBERON:0002616!5.49e-17!59;UBERON:0001017!1.06e-16!82;UBERON:0005743!3.74e-16!86;UBERON:0000073!9.21e-16!94;UBERON:0001016!9.21e-16!94;UBERON:0003056!1.02e-14!61;UBERON:0001893!1.17e-14!34;UBERON:0002020!1.70e-14!34;UBERON:0003528!1.70e-14!34;UBERON:0002791!3.81e-14!33;UBERON:0001869!4.97e-14!32;UBERON:0002619!3.07e-12!22;UBERON:0001950!4.00e-11!20;UBERON:0000956!2.70e-10!25;UBERON:0000203!2.70e-10!25;UBERON:0000924!1.91e-09!173;UBERON:0006601!1.91e-09!173;UBERON:0000153!2.75e-09!129;UBERON:0007811!2.75e-09!129;UBERON:0004121!3.78e-09!169;UBERON:0000033!2.24e-08!123;UBERON:0000025!9.75e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.52e-12;32!UBERON:0001893;1.60e-12;34!UBERON:0002780;1.91e-12;41!UBERON:0001890;1.91e-12;41!UBERON:0003528;2.17e-12;34!UBERON:0002020;2.17e-12;34!UBERON:0002791;2.83e-12;32!UBERON:0002619;3.22e-12;22!UBERON:0000073;2.90e-11;53!UBERON:0002616;2.90e-11;53!UBERON:0001950;4.14e-11;20!UBERON:0000956;3.40e-10;25!UBERON:0000203;3.40e-10;25!UBERON:0007023;7.30e-09;114!UBERON:0000955;2.76e-08;68!UBERON:0001017;7.80e-08;75!UBERON:0001016;4.72e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-29,114;UBERON:0001049,1.91e-20,56;UBERON:0005068,1.91e-20,56;UBERON:0006241,1.91e-20,56;UBERON:0007135,1.91e-20,56;UBERON:0000073,2.03e-19,53;UBERON:0002616,2.03e-19,53;UBERON:0002346,9.05e-18,86;UBERON:0003075,1.32e-17,82;UBERON:0007284,1.32e-17,82;UBERON:0002780,2.39e-17,41;UBERON:0001890,2.39e-17,41;UBERON:0003080,2.39e-17,41;UBERON:0006240,2.39e-17,41;UBERON:0000955,1.15e-16,68;UBERON:0006238,1.15e-16,68;UBERON:0001017,3.53e-16,81;UBERON:0001016,9.95e-16,89;UBERON:0003056,1.11e-14,61;UBERON:0001893,1.17e-14,34;UBERON:0003528,1.70e-14,34;UBERON:0002020,1.70e-14,34;UBERON:0001869,4.97e-14,32;UBERON:0002791,1.14e-13,32;UBERON:0010371,2.93e-12,104;UBERON:0002619,3.07e-12,22;UBERON:0011216,1.73e-11,223;UBERON:0001950,4.00e-11,20;UBERON:0000956,2.70e-10,25;UBERON:0000203,2.70e-10,25;UBERON:0004121,4.05e-09,171;UBERON:0000924,4.05e-09,171;UBERON:0006601,4.05e-09,171 | |||
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259689231 | ||
|short_description=p1@MAP2K5 | |||
}} | }} |
Latest revision as of 17:50, 18 September 2015
Short description: | p1@MAP2K5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MAP2K5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000178640, ENST00000395476, ENST00000541298, NM_002757, NM_145160, uc002aqt.1, uc002aqu.2, uc002aqv.2_5end |
EntrezGene: | MAP2K5 |
HGNC: | 6845 |
UniProt: | Q13163F5GZJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.05e-29 | 114 |
neural tube | 1.91e-20 | 56 |
neural rod | 1.91e-20 | 56 |
future spinal cord | 1.91e-20 | 56 |
neural keel | 1.91e-20 | 56 |
regional part of nervous system | 2.03e-19 | 53 |
regional part of brain | 2.03e-19 | 53 |
neurectoderm | 9.05e-18 | 86 |
neural plate | 1.32e-17 | 82 |
presumptive neural plate | 1.32e-17 | 82 |
regional part of forebrain | 2.39e-17 | 41 |
forebrain | 2.39e-17 | 41 |
anterior neural tube | 2.39e-17 | 41 |
future forebrain | 2.39e-17 | 41 |
brain | 1.15e-16 | 68 |
future brain | 1.15e-16 | 68 |
central nervous system | 3.53e-16 | 81 |
nervous system | 9.95e-16 | 89 |
pre-chordal neural plate | 1.11e-14 | 61 |
telencephalon | 1.17e-14 | 34 |
brain grey matter | 1.70e-14 | 34 |
gray matter | 1.70e-14 | 34 |
cerebral hemisphere | 4.97e-14 | 32 |
regional part of telencephalon | 1.14e-13 | 32 |
ecto-epithelium | 2.93e-12 | 104 |
regional part of cerebral cortex | 3.07e-12 | 22 |
organ system subdivision | 1.73e-11 | 223 |
neocortex | 4.00e-11 | 20 |
cerebral cortex | 2.70e-10 | 25 |
pallium | 2.70e-10 | 25 |
ectoderm-derived structure | 4.05e-09 | 171 |
ectoderm | 4.05e-09 | 171 |
presumptive ectoderm | 4.05e-09 | 171 |