FFCP PHASE1:Hg19::chr4:4865276..4865280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:4865276..4865280,- | |||
|description=CAGE_peak_at_chr4:4865276..4865280,- | |description=CAGE_peak_at_chr4:4865276..4865280,- | ||
|id=chr4:4865276..4865280,- | |id=chr4:4865276..4865280,- | ||
|ontology_enrichment_celltype=CL:0000057!4.28e-09!75;CL:0002334!5.87e-09!12;CL:0002556!2.39e-07!6;CL:0000055!6.55e-07!180 | |ontology_enrichment_celltype=CL:0000057!4.28e-09!75;CL:0002334!5.87e-09!12;CL:0002556!2.39e-07!6;CL:0000055!6.55e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002552;2.38e-23;5!CL:0000319;1.33e-13;1!CL:0002556;3.08e-09;6!CL:0000159;1.93e-07;2!CL:0002617;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,2.57e-23,5;CL:0000319,1.10e-13,1;CL:0002556,3.42e-09,6;CL:0002617,1.54e-07,2;CL:0000159,1.75e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.33e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.33e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.10e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000010!2.30e-09!8;UBERON:0001758!2.39e-07!6;UBERON:0003672!2.39e-07!6 | |ontology_enrichment_uberon=UBERON:0000010!2.30e-09!8;UBERON:0001758!2.39e-07!6;UBERON:0003672!2.39e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001828;7.64e-15;8!UBERON:0000941;1.33e-13;1!UBERON:0001785;1.33e-13;1!UBERON:0002464;1.33e-13;1!UBERON:0004904;1.33e-13;1!UBERON:0001021;1.33e-13;1!UBERON:0000165;3.56e-11;28!UBERON:0003729;2.36e-09;13!UBERON:0001758;3.08e-09;6!UBERON:0003672;3.08e-09;6!UBERON:0003129;4.83e-08;7!UBERON:0003714;1.93e-07;2!UBERON:0005162;1.93e-07;2!UBERON:0000122;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,8.01e-15,8;UBERON:0000941,1.42e-13,1;UBERON:0001785,1.42e-13,1;UBERON:0002464,1.42e-13,1;UBERON:0004904,1.42e-13,1;UBERON:0001021,1.42e-13,1;UBERON:0003902,1.42e-13,1;UBERON:0005425,1.42e-13,1;UBERON:0000165,9.35e-11,29;UBERON:0000930,9.35e-11,29;UBERON:0003729,2.43e-09,13;UBERON:0001758,3.42e-09,6;UBERON:0003672,3.42e-09,6;UBERON:0001444,7.76e-09,49;UBERON:0003129,5.28e-08,7;UBERON:0000033,1.10e-07,56;UBERON:0003714,1.99e-07,2;UBERON:0005162,1.99e-07,2;UBERON:0000122,1.99e-07,2;UBERON:0000153,6.63e-07,62;UBERON:0007811,6.63e-07,62 | |||
|phase1_expression=1.81678379270557,0.428201047781966,0.422863212287913,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.993943903390637,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0.161872944368132,0,0.61246251376468,2.33385202892359,0,2.37600571456411,3.21447008062124,0,0,0.841680569770331,0.750711119231785,0,0.438977620880838,2.45190236639216,1.20190447125277,0,0,0.213557388818567,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5867062865676,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.496215615637554,0.306923946576125,1.68396056659844,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0.328508624055237,0,0.464841513839837,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0.082509499920588,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,2.232950216158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.854592569019785,0,0,0,0,0,0.159426272728822,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.889563386041866,0,0.104421949505455,0.134802265961354,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0.450970258243478,0,0,0,0,0,0,0.138674673013139,1.21491816834592,0,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0.195551382734803,0,0,0,0,0.229073192331831,0,0,0,0,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0.285465333544967,0.705797459094515,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0.295710299979268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0.231522474323834,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0.327609848846413,1.47463745252232,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0.471797825567689,0,0.169732529954025,0,5.8249809201731,0.558644917973244,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0.353909170043221,0,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697448552208751,0,0,0,0,0,0,0.473328002922261,0.0852134047591577,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,4.17796627838873,0.713520544665411,0.67767649223376,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,2.68211655728414,0.0679914901909147,0,0,0.371995018166751,0,0.432626562123789,0,0,0.380095503034311,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr4:4865276..4865280,- | |short_description=p@chr4:4865276..4865280,- | ||
}} | }} |
Latest revision as of 05:31, 30 July 2015
Short description: | p@chr4:4865276..4865280, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:4865276..4865280, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 2.57e-23 | 5 |
mucus secreting cell | 1.10e-13 | 1 |
fibroblast of periodontium | 3.42e-09 | 6 |
adipocyte of breast | 1.54e-07 | 2 |
seromucus secreting cell | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 8.01e-15 | 8 |
cranial nerve II | 1.42e-13 | 1 |
cranial nerve | 1.42e-13 | 1 |
nerve trunk | 1.42e-13 | 1 |
nerve connecting eye with brain | 1.42e-13 | 1 |
nerve | 1.42e-13 | 1 |
retinal neural layer | 1.42e-13 | 1 |
presumptive neural retina | 1.42e-13 | 1 |
mouth | 9.35e-11 | 29 |
stomodeum | 9.35e-11 | 29 |
mouth mucosa | 2.43e-09 | 13 |
periodontium | 3.42e-09 | 6 |
dentition | 3.42e-09 | 6 |
subdivision of head | 7.76e-09 | 49 |
skull | 5.28e-08 | 7 |
head | 1.10e-07 | 56 |
neural tissue | 1.99e-07 | 2 |
multi cell component structure | 1.99e-07 | 2 |
neuron projection bundle | 1.99e-07 | 2 |
anterior region of body | 6.63e-07 | 62 |
craniocervical region | 6.63e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.10e-13 | 1 |