FFCP PHASE1:Hg19::chr4:57907017..57907105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514062_5end | |association_with_transcript=0bp_to_ENST00000514062_5end | ||
|cluster_id=chr4:57907017..57907105,- | |||
|coexpression_cluster_id=C772 | |||
|description=CAGE_peak_1_at_ENST00000514062_5end | |description=CAGE_peak_1_at_ENST00000514062_5end | ||
|id=chr4:57907017..57907105,- | |id=chr4:57907017..57907105,- | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-16!180;CL:0000222!2.01e-16!119;CL:0000183!2.91e-13!59;CL:0000192!3.46e-12!42;CL:0000514!3.46e-12!42;CL:0000680!8.77e-12!57;CL:0000056!8.77e-12!57;CL:0000355!8.77e-12!57;CL:0000359!2.43e-11!32;CL:0000187!2.96e-11!54;CL:0000220!3.85e-11!246;CL:0002321!1.39e-10!248;CL:0000393!4.82e-09!60;CL:0000211!4.82e-09!60;CL:0000057!1.80e-08!75 | |ontology_enrichment_celltype=CL:0000055!1.66e-16!180;CL:0000222!2.01e-16!119;CL:0000183!2.91e-13!59;CL:0000192!3.46e-12!42;CL:0000514!3.46e-12!42;CL:0000680!8.77e-12!57;CL:0000056!8.77e-12!57;CL:0000355!8.77e-12!57;CL:0000359!2.43e-11!32;CL:0000187!2.96e-11!54;CL:0000220!3.85e-11!246;CL:0002321!1.39e-10!248;CL:0000393!4.82e-09!60;CL:0000211!4.82e-09!60;CL:0000057!1.80e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.26e-11;32!CL:0000192;7.48e-09;43!CL:1000449;7.91e-07;15!CL:1000497;8.95e-07;17!CL:0002518;8.95e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.14e-16,121;CL:0000192,1.51e-12,43;CL:0000514,1.51e-12,43;CL:0000359,4.51e-12,32;CL:0000680,1.52e-10,58;CL:0000056,1.52e-10,58;CL:0000355,1.52e-10,58;CL:0002321,2.64e-10,250;CL:0000187,5.80e-10,55;CL:0000057,3.78e-08,76;CL:0000393,7.96e-08,61;CL:0000211,7.96e-08,61;CL:1000449,7.21e-07,15;CL:1000497,9.21e-07,17;CL:0002518,9.21e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;7.48e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.04e-18!79;UBERON:0007798!5.04e-18!79;UBERON:0003914!2.68e-16!118;UBERON:0000477!3.15e-16!286;UBERON:0004872!9.83e-16!84;UBERON:0000055!3.82e-15!69;UBERON:0001009!4.94e-15!113;UBERON:0004535!2.03e-14!110;UBERON:0001981!8.85e-13!60;UBERON:0007500!8.85e-13!60;UBERON:0004537!8.85e-13!60;UBERON:0006965!8.85e-13!60;UBERON:0004111!1.13e-12!241;UBERON:0005256!1.86e-12!143;UBERON:0000481!2.77e-12!347;UBERON:0000119!1.06e-11!312;UBERON:0003103!1.17e-11!69;UBERON:0001637!2.30e-11!42;UBERON:0003509!2.30e-11!42;UBERON:0004572!2.30e-11!42;UBERON:0000483!2.44e-11!309;UBERON:0002385!3.17e-11!63;UBERON:0001015!3.17e-11!63;UBERON:0000383!3.17e-11!63;UBERON:0001134!3.49e-11!61;UBERON:0002036!3.49e-11!61;UBERON:0003082!3.49e-11!61;UBERON:0000475!4.72e-11!365;UBERON:0002100!1.91e-10!216;UBERON:0000486!2.00e-10!82;UBERON:0000914!6.43e-10!83;UBERON:0002329!6.43e-10!83;UBERON:0003077!6.43e-10!83;UBERON:0003059!6.43e-10!83;UBERON:0007282!6.43e-10!83;UBERON:0009618!6.43e-10!83;UBERON:0007285!6.43e-10!83;UBERON:0000468!7.39e-10!659;UBERON:0000467!1.31e-09!625;UBERON:0000480!2.16e-09!626;UBERON:0004290!2.94e-09!70;UBERON:0007100!3.84e-09!27;UBERON:0003104!6.09e-09!238;UBERON:0009142!6.09e-09!238;UBERON:0000948!1.32e-08!24;UBERON:0005498!1.32e-08!24;UBERON:0004140!1.32e-08!24;UBERON:0009881!1.32e-08!24;UBERON:0004141!1.32e-08!24;UBERON:0003084!1.32e-08!24;UBERON:0007005!1.32e-08!24;UBERON:0004139!1.32e-08!24;UBERON:0004291!1.32e-08!24;UBERON:0004573!1.35e-08!33;UBERON:0004571!1.35e-08!33;UBERON:0000490!1.87e-08!138;UBERON:0000025!4.98e-08!194;UBERON:0004876!1.18e-07!20;UBERON:0003886!7.23e-07!63 | |ontology_enrichment_uberon=UBERON:0002049!5.04e-18!79;UBERON:0007798!5.04e-18!79;UBERON:0003914!2.68e-16!118;UBERON:0000477!3.15e-16!286;UBERON:0004872!9.83e-16!84;UBERON:0000055!3.82e-15!69;UBERON:0001009!4.94e-15!113;UBERON:0004535!2.03e-14!110;UBERON:0001981!8.85e-13!60;UBERON:0007500!8.85e-13!60;UBERON:0004537!8.85e-13!60;UBERON:0006965!8.85e-13!60;UBERON:0004111!1.13e-12!241;UBERON:0005256!1.86e-12!143;UBERON:0000481!2.77e-12!347;UBERON:0000119!1.06e-11!312;UBERON:0003103!1.17e-11!69;UBERON:0001637!2.30e-11!42;UBERON:0003509!2.30e-11!42;UBERON:0004572!2.30e-11!42;UBERON:0000483!2.44e-11!309;UBERON:0002385!3.17e-11!63;UBERON:0001015!3.17e-11!63;UBERON:0000383!3.17e-11!63;UBERON:0001134!3.49e-11!61;UBERON:0002036!3.49e-11!61;UBERON:0003082!3.49e-11!61;UBERON:0000475!4.72e-11!365;UBERON:0002100!1.91e-10!216;UBERON:0000486!2.00e-10!82;UBERON:0000914!6.43e-10!83;UBERON:0002329!6.43e-10!83;UBERON:0003077!6.43e-10!83;UBERON:0003059!6.43e-10!83;UBERON:0007282!6.43e-10!83;UBERON:0009618!6.43e-10!83;UBERON:0007285!6.43e-10!83;UBERON:0000468!7.39e-10!659;UBERON:0000467!1.31e-09!625;UBERON:0000480!2.16e-09!626;UBERON:0004290!2.94e-09!70;UBERON:0007100!3.84e-09!27;UBERON:0003104!6.09e-09!238;UBERON:0009142!6.09e-09!238;UBERON:0000948!1.32e-08!24;UBERON:0005498!1.32e-08!24;UBERON:0004140!1.32e-08!24;UBERON:0009881!1.32e-08!24;UBERON:0004141!1.32e-08!24;UBERON:0003084!1.32e-08!24;UBERON:0007005!1.32e-08!24;UBERON:0004139!1.32e-08!24;UBERON:0004291!1.32e-08!24;UBERON:0004573!1.35e-08!33;UBERON:0004571!1.35e-08!33;UBERON:0000490!1.87e-08!138;UBERON:0000025!4.98e-08!194;UBERON:0004876!1.18e-07!20;UBERON:0003886!7.23e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.68e-09;25!UBERON:0001637;3.90e-09;42!UBERON:0003509;3.90e-09;42!UBERON:0004572;3.90e-09;42!UBERON:0000948;6.58e-09;22!UBERON:0004573;1.39e-08;33!UBERON:0004571;1.39e-08;33!UBERON:0002049;9.91e-08;75!UBERON:0007798;9.91e-08;75!UBERON:0000055;3.19e-07;65!UBERON:0003914;4.43e-07;74!UBERON:0006555;7.91e-07;15!UBERON:0004819;7.91e-07;15!UBERON:0001285;7.91e-07;15!UBERON:0007684;7.91e-07;15!UBERON:0007500;8.81e-07;56!UBERON:0001981;8.81e-07;56!UBERON:0004537;8.81e-07;56 | |||
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| ||
|short_description=p1@ENST00000514062 | |short_description=p1@ENST00000514062 | ||
}} | }} |
Latest revision as of 05:53, 30 July 2015
Short description: | p1@ENST00000514062 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000514062_5end |
Coexpression cluster: | C772_Smooth_Fibroblast_Adipocyte_Preadipocyte_hepatic_Renal_Osteoblast |
Association with transcript: | 0bp_to_ENST00000514062_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.14e-16 | 121 |
smooth muscle cell | 1.51e-12 | 43 |
smooth muscle myoblast | 1.51e-12 | 43 |
vascular associated smooth muscle cell | 4.51e-12 | 32 |
muscle precursor cell | 1.52e-10 | 58 |
myoblast | 1.52e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-10 | 58 |
embryonic cell | 2.64e-10 | 250 |
muscle cell | 5.80e-10 | 55 |
fibroblast | 3.78e-08 | 76 |
electrically responsive cell | 7.96e-08 | 61 |
electrically active cell | 7.96e-08 | 61 |
epithelial cell of nephron | 7.21e-07 | 15 |
kidney cell | 9.21e-07 | 17 |
kidney epithelial cell | 9.21e-07 | 17 |