FFCP PHASE1:Hg19::chr7:27157834..27157879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:27157834..27157879,- | |||
|coexpression_cluster_id=C4678 | |||
|description=CAGE_peak_at_chr7:27157834..27157879,- | |description=CAGE_peak_at_chr7:27157834..27157879,- | ||
|id=chr7:27157834..27157879,- | |id=chr7:27157834..27157879,- | ||
|ontology_enrichment_celltype=CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000183!2.74e-14!59;CL:1000507!8.40e-14!12;CL:1000494!8.40e-14!12;CL:1000497!2.97e-13!18;CL:0002518!2.97e-13!18;CL:1000449!3.27e-13!16;CL:0000222!5.03e-13!119;CL:0000187!3.88e-12!54;CL:0000680!8.62e-12!57;CL:0000056!8.62e-12!57;CL:0000355!8.62e-12!57;CL:0000393!9.67e-11!60;CL:0000211!9.67e-11!60;CL:0002681!6.54e-10!13;CL:0002584!6.54e-10!13;CL:0000359!1.25e-09!32;CL:0002334!3.04e-09!12;CL:0002539!3.20e-08!10 | |ontology_enrichment_celltype=CL:0000192!1.53e-14!42;CL:0000514!1.53e-14!42;CL:0000183!2.74e-14!59;CL:1000507!8.40e-14!12;CL:1000494!8.40e-14!12;CL:1000497!2.97e-13!18;CL:0002518!2.97e-13!18;CL:1000449!3.27e-13!16;CL:0000222!5.03e-13!119;CL:0000187!3.88e-12!54;CL:0000680!8.62e-12!57;CL:0000056!8.62e-12!57;CL:0000355!8.62e-12!57;CL:0000393!9.67e-11!60;CL:0000211!9.67e-11!60;CL:0002681!6.54e-10!13;CL:0002584!6.54e-10!13;CL:0000359!1.25e-09!32;CL:0002334!3.04e-09!12;CL:0002539!3.20e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.49e-16;10!CL:1000494;3.49e-16;10!CL:1000497;1.26e-15;17!CL:0002518;1.26e-15;17!CL:1000449;5.03e-15;15!CL:0002539;3.70e-13;10!CL:0000192;9.92e-13;43!CL:0000359;1.49e-11;32!CL:0002681;4.90e-10;12!CL:0002584;4.90e-10;12!CL:0000187;8.10e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.11e-16,43;CL:0000514,2.11e-16,43;CL:1000507,2.58e-16,10;CL:1000494,2.58e-16,10;CL:1000497,1.14e-15,17;CL:0002518,1.14e-15,17;CL:1000449,4.30e-15,15;CL:0000187,5.12e-14,55;CL:0002539,3.35e-13,10;CL:0000680,5.82e-13,58;CL:0000056,5.82e-13,58;CL:0000355,5.82e-13,58;CL:0000393,5.15e-12,61;CL:0000211,5.15e-12,61;CL:0000359,1.54e-11,32;CL:0000222,1.91e-11,121;CL:0002681,4.96e-10,12;CL:0002584,4.96e-10,12 | |||
|ontology_enrichment_development_v019=CL:0000514;9.92e-13;43!CL:0000355;3.70e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.58e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.47e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!3.45e-24!118;UBERON:0000025!2.24e-16!194;UBERON:0009569!1.64e-15!113;UBERON:0002100!2.84e-15!216;UBERON:0000080!1.31e-14!18;UBERON:0002120!1.31e-14!18;UBERON:0004875!1.31e-14!18;UBERON:0005721!1.31e-14!18;UBERON:0005754!1.31e-14!18;UBERON:0007297!1.31e-14!18;UBERON:0003887!1.51e-14!21;UBERON:0006555!5.16e-14!17;UBERON:0005103!5.16e-14!17;UBERON:0000083!5.16e-14!17;UBERON:0009201!5.16e-14!17;UBERON:0004819!5.16e-14!17;UBERON:0006553!5.16e-14!17;UBERON:0003074!5.16e-14!17;UBERON:0003060!5.16e-14!17;UBERON:0000489!7.34e-14!32;UBERON:0009773!8.40e-14!12;UBERON:0001231!8.40e-14!12;UBERON:0004810!8.40e-14!12;UBERON:0005256!1.31e-13!143;UBERON:0002417!3.05e-13!61;UBERON:0000916!3.05e-13!61;UBERON:0004211!3.27e-13!16;UBERON:0001285!3.27e-13!16;UBERON:0007684!3.27e-13!16;UBERON:0003220!3.27e-13!16;UBERON:0004208!3.27e-13!16;UBERON:0003886!8.46e-13!63;UBERON:0004876!1.27e-12!20;UBERON:0001981!1.38e-12!60;UBERON:0007500!1.38e-12!60;UBERON:0004537!1.38e-12!60;UBERON:0006965!1.38e-12!60;UBERON:0002385!1.60e-12!63;UBERON:0001015!1.60e-12!63;UBERON:0000383!1.60e-12!63;UBERON:0003103!1.95e-12!69;UBERON:0004872!2.27e-12!84;UBERON:0004111!2.94e-12!241;UBERON:0002113!5.31e-12!27;UBERON:0003918!5.31e-12!27;UBERON:0005095!5.31e-12!27;UBERON:0007687!5.31e-12!27;UBERON:0000055!6.23e-12!69;UBERON:0001135!1.09e-11!15;UBERON:0004573!1.19e-11!33;UBERON:0004571!1.19e-11!33;UBERON:0000483!1.31e-11!309;UBERON:0000464!1.40e-11!104;UBERON:0000058!1.43e-11!26;UBERON:0005177!1.71e-11!107;UBERON:0001637!2.16e-11!42;UBERON:0003509!2.16e-11!42;UBERON:0004572!2.16e-11!42;UBERON:0000490!2.22e-11!138;UBERON:0000466!2.25e-11!126;UBERON:0000477!2.29e-11!286;UBERON:0001134!2.36e-11!61;UBERON:0002036!2.36e-11!61;UBERON:0003082!2.36e-11!61;UBERON:0000119!3.00e-11!312;UBERON:0002049!1.57e-10!79;UBERON:0007798!1.57e-10!79;UBERON:0002553!1.74e-10!70;UBERON:0003104!1.76e-10!238;UBERON:0009142!1.76e-10!238;UBERON:0005172!2.63e-10!55;UBERON:0005173!2.63e-10!55;UBERON:0001225!6.54e-10!13;UBERON:0008987!6.54e-10!13;UBERON:0000481!8.31e-10!347;UBERON:0001851!5.80e-09!16;UBERON:0004290!1.08e-08!70;UBERON:0004535!2.03e-08!110;UBERON:0004237!3.20e-08!10;UBERON:0004695!3.20e-08!10;UBERON:0002111!3.20e-08!10;UBERON:0004178!3.20e-08!10;UBERON:0000353!3.86e-08!17;UBERON:0000926!5.14e-08!448;UBERON:0004120!5.14e-08!448;UBERON:0006603!5.14e-08!448;UBERON:0003064!6.68e-08!37;UBERON:0001009!6.82e-08!113;UBERON:0001008!6.86e-08!45;UBERON:0000947!1.36e-07!21;UBERON:0010191!1.36e-07!21;UBERON:0006554!2.12e-07!44;UBERON:0000914!4.88e-07!83;UBERON:0002329!4.88e-07!83;UBERON:0003077!4.88e-07!83;UBERON:0003059!4.88e-07!83;UBERON:0007282!4.88e-07!83;UBERON:0009618!4.88e-07!83;UBERON:0007285!4.88e-07!83;UBERON:0003076!4.94e-07!15;UBERON:0003057!4.94e-07!15 | |ontology_enrichment_uberon=UBERON:0003914!3.45e-24!118;UBERON:0000025!2.24e-16!194;UBERON:0009569!1.64e-15!113;UBERON:0002100!2.84e-15!216;UBERON:0000080!1.31e-14!18;UBERON:0002120!1.31e-14!18;UBERON:0004875!1.31e-14!18;UBERON:0005721!1.31e-14!18;UBERON:0005754!1.31e-14!18;UBERON:0007297!1.31e-14!18;UBERON:0003887!1.51e-14!21;UBERON:0006555!5.16e-14!17;UBERON:0005103!5.16e-14!17;UBERON:0000083!5.16e-14!17;UBERON:0009201!5.16e-14!17;UBERON:0004819!5.16e-14!17;UBERON:0006553!5.16e-14!17;UBERON:0003074!5.16e-14!17;UBERON:0003060!5.16e-14!17;UBERON:0000489!7.34e-14!32;UBERON:0009773!8.40e-14!12;UBERON:0001231!8.40e-14!12;UBERON:0004810!8.40e-14!12;UBERON:0005256!1.31e-13!143;UBERON:0002417!3.05e-13!61;UBERON:0000916!3.05e-13!61;UBERON:0004211!3.27e-13!16;UBERON:0001285!3.27e-13!16;UBERON:0007684!3.27e-13!16;UBERON:0003220!3.27e-13!16;UBERON:0004208!3.27e-13!16;UBERON:0003886!8.46e-13!63;UBERON:0004876!1.27e-12!20;UBERON:0001981!1.38e-12!60;UBERON:0007500!1.38e-12!60;UBERON:0004537!1.38e-12!60;UBERON:0006965!1.38e-12!60;UBERON:0002385!1.60e-12!63;UBERON:0001015!1.60e-12!63;UBERON:0000383!1.60e-12!63;UBERON:0003103!1.95e-12!69;UBERON:0004872!2.27e-12!84;UBERON:0004111!2.94e-12!241;UBERON:0002113!5.31e-12!27;UBERON:0003918!5.31e-12!27;UBERON:0005095!5.31e-12!27;UBERON:0007687!5.31e-12!27;UBERON:0000055!6.23e-12!69;UBERON:0001135!1.09e-11!15;UBERON:0004573!1.19e-11!33;UBERON:0004571!1.19e-11!33;UBERON:0000483!1.31e-11!309;UBERON:0000464!1.40e-11!104;UBERON:0000058!1.43e-11!26;UBERON:0005177!1.71e-11!107;UBERON:0001637!2.16e-11!42;UBERON:0003509!2.16e-11!42;UBERON:0004572!2.16e-11!42;UBERON:0000490!2.22e-11!138;UBERON:0000466!2.25e-11!126;UBERON:0000477!2.29e-11!286;UBERON:0001134!2.36e-11!61;UBERON:0002036!2.36e-11!61;UBERON:0003082!2.36e-11!61;UBERON:0000119!3.00e-11!312;UBERON:0002049!1.57e-10!79;UBERON:0007798!1.57e-10!79;UBERON:0002553!1.74e-10!70;UBERON:0003104!1.76e-10!238;UBERON:0009142!1.76e-10!238;UBERON:0005172!2.63e-10!55;UBERON:0005173!2.63e-10!55;UBERON:0001225!6.54e-10!13;UBERON:0008987!6.54e-10!13;UBERON:0000481!8.31e-10!347;UBERON:0001851!5.80e-09!16;UBERON:0004290!1.08e-08!70;UBERON:0004535!2.03e-08!110;UBERON:0004237!3.20e-08!10;UBERON:0004695!3.20e-08!10;UBERON:0002111!3.20e-08!10;UBERON:0004178!3.20e-08!10;UBERON:0000353!3.86e-08!17;UBERON:0000926!5.14e-08!448;UBERON:0004120!5.14e-08!448;UBERON:0006603!5.14e-08!448;UBERON:0003064!6.68e-08!37;UBERON:0001009!6.82e-08!113;UBERON:0001008!6.86e-08!45;UBERON:0000947!1.36e-07!21;UBERON:0010191!1.36e-07!21;UBERON:0006554!2.12e-07!44;UBERON:0000914!4.88e-07!83;UBERON:0002329!4.88e-07!83;UBERON:0003077!4.88e-07!83;UBERON:0003059!4.88e-07!83;UBERON:0007282!4.88e-07!83;UBERON:0009618!4.88e-07!83;UBERON:0007285!4.88e-07!83;UBERON:0003076!4.94e-07!15;UBERON:0003057!4.94e-07!15 | ||
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|short_description=p@chr7:27157834..27157879,- | |short_description=p@chr7:27157834..27157879,- | ||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27157834..27157879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27157834..27157879, - |
Coexpression cluster: | C4678_Smooth_Mesothelial_glioma_mesenchymal_Renal_liposarcoma_Hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.11e-16 | 43 |
smooth muscle myoblast | 2.11e-16 | 43 |
kidney tubule cell | 2.58e-16 | 10 |
nephron tubule epithelial cell | 2.58e-16 | 10 |
kidney cell | 1.14e-15 | 17 |
kidney epithelial cell | 1.14e-15 | 17 |
epithelial cell of nephron | 4.30e-15 | 15 |
muscle cell | 5.12e-14 | 55 |
aortic smooth muscle cell | 3.35e-13 | 10 |
muscle precursor cell | 5.82e-13 | 58 |
myoblast | 5.82e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.82e-13 | 58 |
electrically responsive cell | 5.15e-12 | 61 |
electrically active cell | 5.15e-12 | 61 |
vascular associated smooth muscle cell | 1.54e-11 | 32 |
mesodermal cell | 1.91e-11 | 121 |
kidney cortical cell | 4.96e-10 | 12 |
renal cortical epithelial cell | 4.96e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.47e-08 | 14 |