FFCP PHASE1:Hg19::chr16:71496112..71496160,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:71496112..71496160,-
|short_description=p1@ZNF23
|description=CAGE_peak_1_at_ZNF23_5end
|association_with_transcript=0bp_to_ENST00000357254,ENST0000039353...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7571 | |EntrezGene=7571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13023 | |HGNC=13023 | ||
|TSSclassifier=strong | |||
|UniProt=P17027,Q8NDP5 | |UniProt=P17027,Q8NDP5 | ||
|association_with_transcript=0bp_to_ENST00000357254,ENST00000393539,ENST00000417828,ENST00000428724,ENST00000497160,ENST00000539742,NM_145911,uc002faf.2_5end | |||
|cluster_id=chr16:71496112..71496160,- | |||
|description=CAGE_peak_1_at_ZNF23_5end | |||
|id=chr16:71496112..71496160,- | |||
|ontology_enrichment_celltype=CL:0002620!3.35e-10!23;CL:0000057!2.12e-08!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.85e-10;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.32e-10,23;CL:0000057,8.95e-09,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.81e-12!57;UBERON:0005068!6.81e-12!57;UBERON:0006241!6.81e-12!57;UBERON:0007135!6.81e-12!57;UBERON:0001017!4.42e-11!82;UBERON:0000073!4.92e-11!94;UBERON:0001016!4.92e-11!94;UBERON:0005743!2.28e-10!86;UBERON:0002780!2.56e-10!41;UBERON:0001890!2.56e-10!41;UBERON:0006240!2.56e-10!41;UBERON:0003080!3.32e-10!42;UBERON:0002616!5.24e-10!59;UBERON:0004121!5.35e-10!169;UBERON:0000924!6.72e-10!173;UBERON:0006601!6.72e-10!173;UBERON:0003075!7.40e-10!86;UBERON:0007284!7.40e-10!86;UBERON:0002346!1.35e-09!90;UBERON:0002020!1.60e-09!34;UBERON:0003528!1.60e-09!34;UBERON:0000955!1.72e-09!69;UBERON:0006238!1.72e-09!69;UBERON:0001869!3.74e-09!32;UBERON:0001893!3.80e-09!34;UBERON:0002791!1.03e-08!33;UBERON:0000033!6.18e-08!123;UBERON:0000153!9.28e-08!129;UBERON:0007811!9.28e-08!129;UBERON:0003056!2.89e-07!61;UBERON:0002097!3.68e-07!40;UBERON:0000956!5.17e-07!25;UBERON:0000203!5.17e-07!25;UBERON:0002619!6.74e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.35e-08;34!UBERON:0002020;3.35e-08;34!UBERON:0002791;4.36e-08;32!UBERON:0001869;6.16e-08;32!UBERON:0001893;2.37e-07;34!UBERON:0002780;4.33e-07;41!UBERON:0001890;4.33e-07;41!UBERON:0000073;7.78e-07;53!UBERON:0002616;7.78e-07;53!UBERON:0000956;8.75e-07;25!UBERON:0000203;8.75e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.45e-12,56;UBERON:0005068,5.45e-12,56;UBERON:0006241,5.45e-12,56;UBERON:0007135,5.45e-12,56;UBERON:0001016,9.70e-12,89;UBERON:0000073,3.11e-11,53;UBERON:0002616,3.11e-11,53;UBERON:0001017,4.26e-11,81;UBERON:0010314,1.23e-10,132;UBERON:0002780,2.53e-10,41;UBERON:0001890,2.53e-10,41;UBERON:0003080,2.53e-10,41;UBERON:0006240,2.53e-10,41;UBERON:0000955,1.54e-09,68;UBERON:0006238,1.54e-09,68;UBERON:0003528,1.59e-09,34;UBERON:0002020,1.59e-09,34;UBERON:0004121,3.09e-09,171;UBERON:0000924,3.09e-09,171;UBERON:0006601,3.09e-09,171;UBERON:0001869,3.71e-09,32;UBERON:0001893,3.76e-09,34;UBERON:0002791,4.30e-09,32;UBERON:0003075,4.53e-09,82;UBERON:0007284,4.53e-09,82;UBERON:0002346,8.04e-09,86;UBERON:0003056,3.91e-07,61;UBERON:0000956,5.14e-07,25;UBERON:0000203,5.14e-07,25;UBERON:0011216,5.48e-07,223;UBERON:0002619,6.70e-07,22;UBERON:0010371,9.75e-07,104 | |||
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| ||
|short_description=p1@ZNF23 | |||
}} | }} |
Latest revision as of 17:35, 17 September 2015
Short description: | p1@ZNF23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF23_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357254, ENST00000393539, ENST00000417828, ENST00000428724, ENST00000497160, ENST00000539742, NM_145911, uc002faf.2_5end |
EntrezGene: | ZNF23 |
HGNC: | 13023 |
UniProt: | P17027Q8NDP5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.32e-10 | 23 |
fibroblast | 8.95e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.45e-12 | 56 |
neural rod | 5.45e-12 | 56 |
future spinal cord | 5.45e-12 | 56 |
neural keel | 5.45e-12 | 56 |
nervous system | 9.70e-12 | 89 |
regional part of nervous system | 3.11e-11 | 53 |
regional part of brain | 3.11e-11 | 53 |
central nervous system | 4.26e-11 | 81 |
structure with developmental contribution from neural crest | 1.23e-10 | 132 |
regional part of forebrain | 2.53e-10 | 41 |
forebrain | 2.53e-10 | 41 |
anterior neural tube | 2.53e-10 | 41 |
future forebrain | 2.53e-10 | 41 |
brain | 1.54e-09 | 68 |
future brain | 1.54e-09 | 68 |
brain grey matter | 1.59e-09 | 34 |
gray matter | 1.59e-09 | 34 |
ectoderm-derived structure | 3.09e-09 | 171 |
ectoderm | 3.09e-09 | 171 |
presumptive ectoderm | 3.09e-09 | 171 |
cerebral hemisphere | 3.71e-09 | 32 |
telencephalon | 3.76e-09 | 34 |
regional part of telencephalon | 4.30e-09 | 32 |
neural plate | 4.53e-09 | 82 |
presumptive neural plate | 4.53e-09 | 82 |
neurectoderm | 8.04e-09 | 86 |
pre-chordal neural plate | 3.91e-07 | 61 |
cerebral cortex | 5.14e-07 | 25 |
pallium | 5.14e-07 | 25 |
organ system subdivision | 5.48e-07 | 223 |
regional part of cerebral cortex | 6.70e-07 | 22 |
ecto-epithelium | 9.75e-07 | 104 |