FFCP PHASE1:Hg19::chr10:3930116..3930153,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3930116..3930153,- | |||
|coexpression_cluster_id=C151 | |||
|description=CAGE_peak_at_chr10:3930116..3930153,- | |description=CAGE_peak_at_chr10:3930116..3930153,- | ||
|id=chr10:3930116..3930153,- | |id=chr10:3930116..3930153,- | ||
|ontology_enrichment_celltype=CL:0002057!1.09e-30!42;CL:0000860!1.07e-27!45;CL:0000766!2.94e-23!76;CL:0000557!7.44e-22!71;CL:0002009!1.25e-20!65;CL:0000738!4.04e-20!140;CL:0000839!1.42e-19!70;CL:0002194!7.64e-19!63;CL:0000576!7.64e-19!63;CL:0000040!7.64e-19!63;CL:0000559!7.64e-19!63;CL:0002031!1.27e-15!124;CL:0000134!6.76e-15!358;CL:0002087!1.00e-14!119;CL:0000723!1.98e-14!436;CL:0002320!2.07e-14!365;CL:0000048!2.69e-14!430;CL:0000763!4.11e-14!112;CL:0000049!4.11e-14!112;CL:0000034!4.23e-14!444;CL:0002371!7.18e-14!591;CL:0000144!1.36e-12!625;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!6.70e-12!165;CL:0000837!6.70e-12!165;CL:0000988!7.52e-12!182;CL:0000219!8.36e-11!390;CL:0000063!1.56e-10!578;CL:0000012!8.88e-10!682;CL:0000548!1.91e-09!679;CL:0000004!1.91e-09!679;CL:0000255!1.91e-09!679;CL:0000003!1.99e-08!722 | |ontology_enrichment_celltype=CL:0002057!1.09e-30!42;CL:0000860!1.07e-27!45;CL:0000766!2.94e-23!76;CL:0000557!7.44e-22!71;CL:0002009!1.25e-20!65;CL:0000738!4.04e-20!140;CL:0000839!1.42e-19!70;CL:0002194!7.64e-19!63;CL:0000576!7.64e-19!63;CL:0000040!7.64e-19!63;CL:0000559!7.64e-19!63;CL:0002031!1.27e-15!124;CL:0000134!6.76e-15!358;CL:0002087!1.00e-14!119;CL:0000723!1.98e-14!436;CL:0002320!2.07e-14!365;CL:0000048!2.69e-14!430;CL:0000763!4.11e-14!112;CL:0000049!4.11e-14!112;CL:0000034!4.23e-14!444;CL:0002371!7.18e-14!591;CL:0000144!1.36e-12!625;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!6.70e-12!165;CL:0000837!6.70e-12!165;CL:0000988!7.52e-12!182;CL:0000219!8.36e-11!390;CL:0000063!1.56e-10!578;CL:0000012!8.88e-10!682;CL:0000548!1.91e-09!679;CL:0000004!1.91e-09!679;CL:0000255!1.91e-09!679;CL:0000003!1.99e-08!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.85e-39;33!CL:0002057;6.85e-39;33!CL:0000473;1.75e-29;39!CL:0000234;1.75e-29;39!CL:0000576;3.49e-23;48!CL:0000766;1.14e-20;69!CL:0002087;2.77e-14;104!CL:0000623;1.38e-11;3!CL:0000767;8.22e-11;3!CL:0000763;3.24e-10;100!CL:0000624;8.42e-09;6!CL:0000738;1.87e-08;136!CL:0000791;3.62e-08;18!CL:0000789;3.62e-08;18!CL:0002419;3.62e-08;18!CL:0001014;6.83e-08;2!CL:0001016;6.83e-08;2!CL:0000097;4.96e-07;5!CL:0000094;5.38e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.88e-46,136;CL:0000860,7.02e-44,42;CL:0002057,7.02e-44,42;CL:0000766,2.68e-42,72;CL:0000473,8.45e-41,48;CL:0000234,8.45e-41,48;CL:0000557,4.56e-40,67;CL:0002031,2.19e-39,120;CL:0002009,1.95e-35,61;CL:0000037,3.80e-35,168;CL:0000839,4.06e-35,66;CL:0002087,1.86e-34,115;CL:0002032,1.30e-33,161;CL:0000837,1.30e-33,161;CL:0000988,8.65e-33,177;CL:0002194,3.13e-31,59;CL:0000576,3.13e-31,59;CL:0000040,3.13e-31,59;CL:0000559,3.13e-31,59;CL:0000763,2.71e-29,108;CL:0000049,2.71e-29,108;CL:0000134,8.99e-15,354;CL:0002320,2.97e-14,361;CL:0000219,1.99e-12,386;CL:0000034,2.02e-12,441;CL:0000048,2.12e-12,427;CL:0000723,4.69e-12,433;CL:0000623,1.38e-11,3;CL:0000825,1.38e-11,3;CL:0000767,8.65e-11,3;CL:0000624,7.75e-09,6;CL:0000791,3.44e-08,18;CL:0000789,3.44e-08,18;CL:0002420,3.44e-08,18;CL:0002419,3.44e-08,18;CL:0000790,3.44e-08,18;CL:0001014,7.44e-08,2;CL:0001016,7.44e-08,2;CL:0000097,4.82e-07,5;CL:0002028,4.82e-07,5;CL:0000094,5.51e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-31;42!CL:0000790;3.62e-08;18!CL:0000049;7.64e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-19!80;UBERON:0003081!7.51e-19!216;UBERON:0001474!3.72e-18!86;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0004765!2.15e-15!101;UBERON:0001434!2.15e-15!101;UBERON:0002193!6.63e-15!112;UBERON:0002405!6.25e-14!115;UBERON:0002384!1.23e-13!375;UBERON:0002204!2.83e-10!167 | |ontology_enrichment_uberon=UBERON:0002371!1.15e-19!80;UBERON:0003081!7.51e-19!216;UBERON:0001474!3.72e-18!86;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0004765!2.15e-15!101;UBERON:0001434!2.15e-15!101;UBERON:0002193!6.63e-15!112;UBERON:0002405!6.25e-14!115;UBERON:0002384!1.23e-13!375;UBERON:0002204!2.83e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-34,76;UBERON:0001474,2.51e-31,82;UBERON:0002390,1.10e-30,98;UBERON:0003061,1.10e-30,98;UBERON:0002405,1.19e-28,93;UBERON:0004765,7.54e-28,90;UBERON:0002193,4.69e-27,108;UBERON:0001434,2.78e-24,100;UBERON:0003081,3.62e-16,203;UBERON:0002204,1.70e-14,167;UBERON:0002384,1.51e-13,371;UBERON:0000926,9.47e-08,315;UBERON:0004120,9.47e-08,315;UBERON:0006603,9.47e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0,0,0,0,0,0,0,5.11373559903575,5.37361157336098,4.79929982279836,0,0.6024118375565,0,0,0,0,13.2958898047651,11.8321224007384,8.68043482863407,0,0,0,0.436194716338694,0,0.242584061187816,0,1.6446715520873,1.23882548358041,2.8769239232215,5.12321413058201,7.33094912654614,5.5159308917859,10.973239620925,6.77132432971709,0.188242339542605,1.09162460023138,1.34834090667051,13.7737751566906,11.2325159476633,12.1474053901818,1.31940520074686,0.797854630486527,0.852449501065388,5.80418477257168,4.53908179752912,3.73693349397345,0.502497330513487,1.0429658368404,4.99534342821768,3.63239701580021,8.10210799172642,13.2914202725171,0.845021145247767,0.637812899895131,0.419317291016752,0.22465726229299,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,6.1655941927969,0,4.13090517239049,3.53709686474248,2.87842098599313,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,1.53288197440768,1.71813722741315,1.26509846009751,0,0,0,0,0,0,0,0,7.86266298576456,10.4301676355568,5.35850294366356,0,0,0,0,0.50133791063589,0,0.795285947051099,0.973269740605272,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0.22452937262617,0,1.53316637465883,0.949265659568129,0,0,7.75560528296651,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0,0,8.70778085271243,6.62951785718023,21.587456115911,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,6.30498432646167,16.8189508390424,12.5776175554153,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,1.50999940573032,1.60091336705167,0.606255142892519,0,0.30239029332968,0,0.61384789315225,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.601519410909855,0,0,0,0,0,0.462092022626489,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,1.02090169995667,0,0,1.5740617341532,0,0,0,0,0.9266210955196,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0.717056761020258,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,3.37460837327251,10.0594254092533,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0.453692771289717,0.466311601748341,1.03498604992744,0.477890301491107,0.449803112163605,0.310525913752519,0.829412415681711,0.797525143673985,0,2.40412174395549,0.761610424337591,0.406870733204662,2.00033525122815,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0.797189041880179,0.654261577023377,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0,0,0,0,0,0,0,0,0,0,5.11373559903575,5.37361157336098,4.79929982279836,0,0.6024118375565,0,0,0,0,13.2958898047651,11.8321224007384,8.68043482863407,0,0,0,0.436194716338694,0,0.242584061187816,0,1.6446715520873,1.23882548358041,2.8769239232215,5.12321413058201,7.33094912654614,5.5159308917859,10.973239620925,6.77132432971709,0.188242339542605,1.09162460023138,1.34834090667051,13.7737751566906,11.2325159476633,12.1474053901818,1.31940520074686,0.797854630486527,0.852449501065388,5.80418477257168,4.53908179752912,3.73693349397345,0.502497330513487,1.0429658368404,4.99534342821768,3.63239701580021,8.10210799172642,13.2914202725171,0.845021145247767,0.637812899895131,0.419317291016752,0.22465726229299,0,0,0.570025487482497,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,6.1655941927969,0,4.13090517239049,3.53709686474248,2.87842098599313,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,1.53288197440768,1.71813722741315,1.26509846009751,0,0,0,0,0,0,0,0,7.86266298576456,10.4301676355568,5.35850294366356,0,0,0,0,0.50133791063589,0,0.795285947051099,0.973269740605272,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0.419499436209906,0,0.417989933073621,0,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0,0,0.22452937262617,0,1.53316637465883,0.949265659568129,0,0,7.75560528296651,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0,0,1.06748995729705,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.337552664482532,0,0.252433774244115,0,0,1.06502877754984,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0,0,0,0,8.70778085271243,6.62951785718023,21.587456115911,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.710783897485092,0,0,0,0,2.43247561282381,0,0,0,0,0,0,0,0,0,6.30498432646167,16.8189508390424,12.5776175554153,0,0,0,0,0.637938751653163,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,1.50999940573032,1.60091336705167,0.606255142892519,0,0.30239029332968,0,0.61384789315225,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.601519410909855,0,0,0,0,0,0.462092022626489,0,0,0.527758144464379,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,1.02090169995667,0,0,1.5740617341532,0,0,0,0,0.9266210955196,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0.717056761020258,0.196498082026242,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,3.37460837327251,10.0594254092533,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.919036730290385,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0.453692771289717,0.466311601748341,1.03498604992744,0.477890301491107,0.449803112163605,0.310525913752519,0.829412415681711,0.797525143673985,0,2.40412174395549,0.761610424337591,0.406870733204662,2.00033525122815,0.429642228169954,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0.303859956177382,0,0,0.797189041880179,0.654261577023377,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.163771917510097,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:3930116..3930153,- | |short_description=p@chr10:3930116..3930153,- | ||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3930116..3930153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3930116..3930153, - |
Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-34 | 76 |
bone element | 2.51e-31 | 82 |
hematopoietic system | 1.10e-30 | 98 |
blood island | 1.10e-30 | 98 |
immune system | 1.19e-28 | 93 |
skeletal element | 7.54e-28 | 90 |
hemolymphoid system | 4.69e-27 | 108 |
skeletal system | 2.78e-24 | 100 |
lateral plate mesoderm | 3.62e-16 | 203 |
musculoskeletal system | 1.70e-14 | 167 |
connective tissue | 1.51e-13 | 371 |
mesoderm | 9.47e-08 | 315 |
mesoderm-derived structure | 9.47e-08 | 315 |
presumptive mesoderm | 9.47e-08 | 315 |