FFCP PHASE1:Hg19::chrX:128782722..128782738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8862 | |EntrezGene=8862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16665 | |HGNC=16665 | ||
|TSSclassifier=strong | |||
|UniProt=B2R550 | |UniProt=B2R550 | ||
|association_with_transcript=3bp_to_ENST00000427399_5end | |association_with_transcript=3bp_to_ENST00000427399_5end | ||
|cluster_id=chrX:128782722..128782738,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_5_at_APLN_5end | |description=CAGE_peak_5_at_APLN_5end | ||
|id=chrX:128782722..128782738,- | |id=chrX:128782722..128782738,- | ||
|ontology_enrichment_celltype=CL:0002139!7.16e-61!24;CL:0000115!2.20e-56!35;CL:0002078!4.62e-50!44;CL:0000071!1.37e-44!18;CL:0002546!1.37e-44!18;CL:0000213!1.10e-36!57;CL:0000215!1.10e-36!57;CL:1000413!6.06e-26!9;CL:0000222!4.36e-18!119;CL:0002544!6.17e-18!6;CL:0005020!1.10e-17!6;CL:0002138!1.10e-17!6;CL:0005022!1.10e-17!6;CL:0002543!2.08e-12!6;CL:0000076!6.06e-11!62;CL:0002144!7.54e-10!3;CL:0002618!1.95e-09!3;CL:0000666!1.04e-07!4;CL:0002188!1.04e-07!4;CL:1000612!1.99e-07!7;CL:1000746!1.99e-07!7;CL:0002545!4.02e-07!2 | |ontology_enrichment_celltype=CL:0002139!7.16e-61!24;CL:0000115!2.20e-56!35;CL:0002078!4.62e-50!44;CL:0000071!1.37e-44!18;CL:0002546!1.37e-44!18;CL:0000213!1.10e-36!57;CL:0000215!1.10e-36!57;CL:1000413!6.06e-26!9;CL:0000222!4.36e-18!119;CL:0002544!6.17e-18!6;CL:0005020!1.10e-17!6;CL:0002138!1.10e-17!6;CL:0005022!1.10e-17!6;CL:0002543!2.08e-12!6;CL:0000076!6.06e-11!62;CL:0002144!7.54e-10!3;CL:0002618!1.95e-09!3;CL:0000666!1.04e-07!4;CL:0002188!1.04e-07!4;CL:1000612!1.99e-07!7;CL:1000746!1.99e-07!7;CL:0002545!4.02e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.16e-74;36!CL:0002139;5.09e-64;24!CL:0002078;1.74e-48;45!CL:0000071;6.44e-48;18!CL:0002188;3.43e-36;5!CL:0000213;6.25e-31;58!CL:0000215;6.25e-31;58!CL:1000746;5.74e-26;7!CL:1000612;5.74e-26;7!CL:1000413;8.15e-20;9!CL:0002138;1.90e-17;6!CL:0002544;3.31e-17;6!CL:0002543;4.37e-17;6!CL:0002144;2.05e-15;3!CL:0002681;2.79e-15;12!CL:0002584;2.79e-15;12!CL:1000449;2.83e-12;15!CL:1000497;7.42e-11;17!CL:0002518;7.42e-11;17!CL:0000076;4.51e-09;63!CL:0002262;4.97e-07;2!CL:1000398;4.97e-07;2!CL:0002545;7.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.25e-86,36;CL:0002078,9.72e-69,45;CL:0002139,4.07e-64,24;CL:0000213,6.49e-53,58;CL:0000215,6.49e-53,58;CL:0000071,5.46e-48,18;CL:0002546,5.46e-48,18;CL:0002188,3.93e-36,5;CL:1000746,6.32e-26,7;CL:1000612,6.32e-26,7;CL:0000222,2.53e-24,121;CL:1000413,8.56e-20,9;CL:0005020,1.80e-17,6;CL:0002138,1.80e-17,6;CL:0005022,1.80e-17,6;CL:0002544,3.91e-17,6;CL:0002543,4.37e-17,6;CL:0002144,1.53e-15,3;CL:0002681,2.95e-15,12;CL:0002584,2.95e-15,12;CL:0000076,5.48e-13,63;CL:1000449,2.96e-12,15;CL:0002321,4.89e-12,250;CL:1000497,7.71e-11,17;CL:0002518,7.71e-11,17;CL:0000066,1.78e-10,253;CL:0002262,5.11e-07,2;CL:1000398,5.11e-07,2;CL:0002545,7.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;6.44e-48;18!CL:0005022;1.90e-17;6!CL:0000222;8.12e-10;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.37e-44!18;UBERON:0004638!1.37e-44!18;UBERON:0004852!1.37e-44!18;UBERON:0006914!1.92e-38!25;UBERON:0000487!1.37e-35!22;UBERON:0000055!2.47e-28!69;UBERON:0003915!6.06e-26!9;UBERON:0004700!6.06e-26!9;UBERON:0001917!6.06e-26!9;UBERON:0002049!1.62e-25!79;UBERON:0007798!1.62e-25!79;UBERON:0004111!3.66e-21!241;UBERON:0001981!6.59e-20!60;UBERON:0007500!6.59e-20!60;UBERON:0004537!6.59e-20!60;UBERON:0006965!6.59e-20!60;UBERON:0000477!1.66e-19!286;UBERON:0000025!5.46e-19!194;UBERON:0004535!1.47e-18!110;UBERON:0001009!7.79e-18!113;UBERON:0004872!2.18e-16!84;UBERON:0003914!3.48e-13!118;UBERON:0000119!4.30e-13!312;UBERON:0001473!4.62e-13!8;UBERON:0004536!4.62e-13!8;UBERON:0006558!4.62e-13!8;UBERON:0000483!1.39e-12!309;UBERON:0002465!2.76e-10!10;UBERON:0001915!7.54e-10!3;UBERON:0001982!7.54e-10!3;UBERON:0001049!6.04e-09!57;UBERON:0005068!6.04e-09!57;UBERON:0006241!6.04e-09!57;UBERON:0007135!6.04e-09!57;UBERON:0001637!1.03e-08!42;UBERON:0003509!1.03e-08!42;UBERON:0004572!1.03e-08!42;UBERON:0006331!2.37e-08!3;UBERON:0001638!4.01e-08!9;UBERON:0003920!4.01e-08!9;UBERON:0004582!4.01e-08!9;UBERON:0000988!5.07e-08!3;UBERON:0002298!7.36e-08!8;UBERON:0000947!1.09e-07!21;UBERON:0010191!1.09e-07!21;UBERON:0000074!1.99e-07!7;UBERON:0001229!1.99e-07!7;UBERON:0001230!1.99e-07!7;UBERON:0005749!1.99e-07!7;UBERON:0004199!1.99e-07!7;UBERON:0004209!1.99e-07!7;UBERON:0004198!1.99e-07!7;UBERON:0002616!2.49e-07!59;UBERON:0005800!4.02e-07!2;UBERON:0001515!4.02e-07!2 | |ontology_enrichment_uberon=UBERON:0001986!1.37e-44!18;UBERON:0004638!1.37e-44!18;UBERON:0004852!1.37e-44!18;UBERON:0006914!1.92e-38!25;UBERON:0000487!1.37e-35!22;UBERON:0000055!2.47e-28!69;UBERON:0003915!6.06e-26!9;UBERON:0004700!6.06e-26!9;UBERON:0001917!6.06e-26!9;UBERON:0002049!1.62e-25!79;UBERON:0007798!1.62e-25!79;UBERON:0004111!3.66e-21!241;UBERON:0001981!6.59e-20!60;UBERON:0007500!6.59e-20!60;UBERON:0004537!6.59e-20!60;UBERON:0006965!6.59e-20!60;UBERON:0000477!1.66e-19!286;UBERON:0000025!5.46e-19!194;UBERON:0004535!1.47e-18!110;UBERON:0001009!7.79e-18!113;UBERON:0004872!2.18e-16!84;UBERON:0003914!3.48e-13!118;UBERON:0000119!4.30e-13!312;UBERON:0001473!4.62e-13!8;UBERON:0004536!4.62e-13!8;UBERON:0006558!4.62e-13!8;UBERON:0000483!1.39e-12!309;UBERON:0002465!2.76e-10!10;UBERON:0001915!7.54e-10!3;UBERON:0001982!7.54e-10!3;UBERON:0001049!6.04e-09!57;UBERON:0005068!6.04e-09!57;UBERON:0006241!6.04e-09!57;UBERON:0007135!6.04e-09!57;UBERON:0001637!1.03e-08!42;UBERON:0003509!1.03e-08!42;UBERON:0004572!1.03e-08!42;UBERON:0006331!2.37e-08!3;UBERON:0001638!4.01e-08!9;UBERON:0003920!4.01e-08!9;UBERON:0004582!4.01e-08!9;UBERON:0000988!5.07e-08!3;UBERON:0002298!7.36e-08!8;UBERON:0000947!1.09e-07!21;UBERON:0010191!1.09e-07!21;UBERON:0000074!1.99e-07!7;UBERON:0001229!1.99e-07!7;UBERON:0001230!1.99e-07!7;UBERON:0005749!1.99e-07!7;UBERON:0004199!1.99e-07!7;UBERON:0004209!1.99e-07!7;UBERON:0004198!1.99e-07!7;UBERON:0002616!2.49e-07!59;UBERON:0005800!4.02e-07!2;UBERON:0001515!4.02e-07!2 | ||
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| ||
|short_description=p5@APLN | |short_description=p5@APLN | ||
}} | }} |
Latest revision as of 09:01, 19 September 2015
Short description: | p5@APLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_APLN_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 3bp_to_ENST00000427399_5end |
EntrezGene: | APLN |
HGNC: | 16665 |
UniProt: | B2R550 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.25e-86 | 36 |
meso-epithelial cell | 9.72e-69 | 45 |
endothelial cell of vascular tree | 4.07e-64 | 24 |
lining cell | 6.49e-53 | 58 |
barrier cell | 6.49e-53 | 58 |
blood vessel endothelial cell | 5.46e-48 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.46e-48 | 18 |
glomerular endothelial cell | 3.93e-36 | 5 |
glomerular cell | 6.32e-26 | 7 |
kidney corpuscule cell | 6.32e-26 | 7 |
mesodermal cell | 2.53e-24 | 121 |
endothelial cell of artery | 8.56e-20 | 9 |
lymphangioblast | 1.80e-17 | 6 |
endothelial cell of lymphatic vessel | 1.80e-17 | 6 |
vascular lymphangioblast | 1.80e-17 | 6 |
aortic endothelial cell | 3.91e-17 | 6 |
vein endothelial cell | 4.37e-17 | 6 |
capillary endothelial cell | 1.53e-15 | 3 |
kidney cortical cell | 2.95e-15 | 12 |
renal cortical epithelial cell | 2.95e-15 | 12 |
squamous epithelial cell | 5.48e-13 | 63 |
epithelial cell of nephron | 2.96e-12 | 15 |
embryonic cell | 4.89e-12 | 250 |
kidney cell | 7.71e-11 | 17 |
kidney epithelial cell | 7.71e-11 | 17 |
epithelial cell | 1.78e-10 | 253 |
endothelial cell of sinusoid | 5.11e-07 | 2 |
endothelial cell of hepatic sinusoid | 5.11e-07 | 2 |
thoracic aorta endothelial cell | 7.61e-07 | 2 |