FFCP PHASE1:Hg19::chr17:36104873..36104903,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36104873..36104903,-
|short_description=p3@HNF1B
|description=CAGE_peak_3_at_HNF1B_5end
|association_with_transcript=105bp_to_ENST00000427275,ENST00000544...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6928 | |EntrezGene=6928 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11630 | |HGNC=11630 | ||
|TSSclassifier=strong | |||
|UniProt=E0YMJ9,E0YMJ8 | |UniProt=E0YMJ9,E0YMJ8 | ||
|association_with_transcript=105bp_to_ENST00000427275,ENST00000544593,ENST00000560016_5end | |||
|cluster_id=chr17:36104873..36104903,- | |||
|description=CAGE_peak_3_at_HNF1B_5end | |||
|id=chr17:36104873..36104903,- | |||
|ontology_enrichment_celltype=CL:1000497!2.63e-22!18;CL:0002518!2.63e-22!18;CL:1000449!2.08e-18!16;CL:1000507!1.10e-17!12;CL:1000494!1.10e-17!12;CL:0000066!1.81e-16!254;CL:0002681!8.54e-13!13;CL:0002584!8.54e-13!13;CL:0000244!8.24e-09!4;CL:0000731!8.24e-09!4;CL:0000239!1.78e-07!3;CL:1000615!1.78e-07!3;CL:0002306!1.78e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.99e-61;17!CL:0002518;8.99e-61;17!CL:1000507;2.09e-53;10!CL:1000494;2.09e-53;10!CL:1000449;2.53e-50;15!CL:0002681;3.86e-35;12!CL:0002584;3.86e-35;12!CL:0000239;1.22e-16;3!CL:1000615;1.22e-16;3!CL:0002306;1.22e-16;3!CL:1000746;6.72e-13;7!CL:1000612;6.72e-13;7!CL:0000650;1.91e-12;2!CL:1000500;1.91e-12;2!CL:1000618;1.91e-12;2!CL:1001318;1.91e-12;2!CL:0002173;1.91e-12;2 | |||
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|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.04e-18!106;DOID:0050687!1.26e-11!143;DOID:299!1.88e-11!25 | |||
|ontology_enrichment_disease_v019=DOID:299;8.67e-13;25!DOID:4468;3.85e-12;2!DOID:4929;1.74e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.06e-13,25;DOID:4468,2.53e-12,2;DOID:4929,2.28e-11,2;DOID:305,1.21e-09,106;DOID:0050687,2.43e-07,143 | |||
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| ||
|short_description=p3@HNF1B | |||
}} | }} |
Latest revision as of 18:29, 19 September 2015
Short description: | p3@HNF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HNF1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 105bp_to_ENST00000427275, ENST00000544593, ENST00000560016_5end |
EntrezGene: | HNF1B |
HGNC: | 11630 |
UniProt: | E0YMJ9E0YMJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 7.39e-61 | 17 |
kidney epithelial cell | 7.39e-61 | 17 |
kidney tubule cell | 1.99e-53 | 10 |
nephron tubule epithelial cell | 1.99e-53 | 10 |
epithelial cell of nephron | 1.96e-50 | 15 |
kidney cortical cell | 2.81e-35 | 12 |
renal cortical epithelial cell | 2.81e-35 | 12 |
brush border epithelial cell | 1.10e-16 | 3 |
kidney cortex tubule cell | 1.10e-16 | 3 |
epithelial cell of proximal tubule | 1.10e-16 | 3 |
epithelial cell | 1.93e-13 | 253 |
glomerular cell | 5.77e-13 | 7 |
kidney corpuscule cell | 5.77e-13 | 7 |
mesangial cell | 1.91e-12 | 2 |
kidney interstitial cell | 1.91e-12 | 2 |
juxtaglomerular complex cell | 1.91e-12 | 2 |
renal interstitial pericyte | 1.91e-12 | 2 |
extraglomerular mesangial cell | 1.91e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.06e-13 | 25 |
clear cell adenocarcinoma | 2.53e-12 | 2 |
tubular adenocarcinoma | 2.28e-11 | 2 |
carcinoma | 1.21e-09 | 106 |
cell type cancer | 2.43e-07 | 143 |