FFCP PHASE1:Hg19::chr17:36105163..36105191,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36105163..36105191,+
|short_description=p1@ENST00000558143
|description=CAGE_peak_1_at_ENST00000558143_5end
|association_with_transcript=-14bp_to_ENST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-14bp_to_ENST00000558143_5end | |||
|cluster_id=chr17:36105163..36105191,+ | |||
|coexpression_cluster_id=C2401 | |||
|description=CAGE_peak_1_at_ENST00000558143_5end | |||
|id=chr17:36105163..36105191,+ | |||
|ontology_enrichment_celltype=CL:1000497!5.04e-24!18;CL:0002518!5.04e-24!18;CL:1000507!2.73e-22!12;CL:1000494!2.73e-22!12;CL:1000449!2.42e-19!16;CL:0002681!1.29e-12!13;CL:0002584!1.29e-12!13;CL:0000239!3.12e-09!3;CL:1000615!3.12e-09!3;CL:0002306!3.12e-09!3;CL:0000066!7.60e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.72e-41;10!CL:1000494;2.72e-41;10!CL:1000497;1.53e-31;17!CL:0002518;1.53e-31;17!CL:1000449;2.47e-27;15!CL:0000650;4.10e-18;2!CL:1000500;4.10e-18;2!CL:1000618;4.10e-18;2!CL:1001318;4.10e-18;2!CL:0002173;4.10e-18;2!CL:0002681;9.11e-12;12!CL:0002584;9.11e-12;12!CL:0000313;2.83e-10;1!CL:0002581;6.32e-10;1!CL:0000669;1.59e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.18e-41,10;CL:1000494,4.18e-41,10;CL:1000497,2.05e-31,17;CL:0002518,2.05e-31,17;CL:1000449,3.28e-27,15;CL:0000650,6.35e-18,2;CL:1000500,6.35e-18,2;CL:1000618,6.35e-18,2;CL:1001318,6.35e-18,2;CL:0002173,6.35e-18,2;CL:0002681,1.18e-11,12;CL:0002584,1.18e-11,12;CL:0000313,2.59e-10,1;CL:0002581,5.79e-10,1;CL:0000669,1.97e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.38e-08;10!UBERON:0007687;1.38e-08;10 | |||
|ontology_enrichment_disease=DOID:299!5.78e-11!25;DOID:305!9.95e-10!106;DOID:4468!6.48e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.83e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.59e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002113!2.06e-23!27;UBERON:0003918!2.06e-23!27;UBERON:0005095!2.06e-23!27;UBERON:0007687!2.06e-23!27;UBERON:0009773!2.73e-22!12;UBERON:0001231!2.73e-22!12;UBERON:0004810!2.73e-22!12;UBERON:0006555!1.16e-21!17;UBERON:0005103!1.16e-21!17;UBERON:0000083!1.16e-21!17;UBERON:0009201!1.16e-21!17;UBERON:0004819!1.16e-21!17;UBERON:0006553!1.16e-21!17;UBERON:0003074!1.16e-21!17;UBERON:0003060!1.16e-21!17;UBERON:0000489!1.39e-21!32;UBERON:0006554!1.72e-20!44;UBERON:0000058!1.73e-20!26;UBERON:0000080!2.74e-20!18;UBERON:0002120!2.74e-20!18;UBERON:0004875!2.74e-20!18;UBERON:0005721!2.74e-20!18;UBERON:0005754!2.74e-20!18;UBERON:0007297!2.74e-20!18;UBERON:0001008!6.52e-20!45;UBERON:0003887!1.05e-19!21;UBERON:0004211!2.42e-19!16;UBERON:0001285!2.42e-19!16;UBERON:0007684!2.42e-19!16;UBERON:0003220!2.42e-19!16;UBERON:0004208!2.42e-19!16;UBERON:0005172!1.93e-18!55;UBERON:0005173!1.93e-18!55;UBERON:0004876!5.88e-18!20;UBERON:0002417!4.87e-16!61;UBERON:0000916!4.87e-16!61;UBERON:0003064!2.23e-15!37;UBERON:0001225!1.29e-12!13;UBERON:0008987!1.29e-12!13;UBERON:0005177!1.56e-12!107;UBERON:0004921!7.53e-12!129;UBERON:0004185!7.53e-12!129;UBERON:0005409!2.20e-11!35;UBERON:0003886!4.84e-11!63;UBERON:0000466!3.31e-10!126;UBERON:0001851!5.74e-10!16;UBERON:0003104!1.22e-09!238;UBERON:0009142!1.22e-09!238;UBERON:0002553!1.84e-09!70;UBERON:0001007!2.00e-09!155;UBERON:0001555!2.00e-09!155;UBERON:0007026!2.00e-09!155;UBERON:0000353!2.71e-09!17;UBERON:0006853!3.12e-09!3;UBERON:0007685!3.12e-09!3;UBERON:0004134!3.12e-09!3;UBERON:0009569!1.57e-08!113;UBERON:0004119!5.06e-08!169;UBERON:0000925!5.06e-08!169;UBERON:0006595!5.06e-08!169;UBERON:0000160!5.83e-08!27;UBERON:0003103!1.18e-07!69;UBERON:0000077!2.46e-07!130;UBERON:0000464!3.95e-07!104;UBERON:0000481!7.46e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.72e-41;10!UBERON:0009773;2.72e-41;10!UBERON:0001231;2.72e-41;10!UBERON:0004810;2.72e-41;10!UBERON:0002113;1.44e-34;24!UBERON:0011143;1.44e-34;24!UBERON:0000489;2.32e-28;29!UBERON:0006554;2.28e-27;30!UBERON:0001008;2.28e-27;30!UBERON:0006555;2.47e-27;15!UBERON:0004819;2.47e-27;15!UBERON:0001285;2.47e-27;15!UBERON:0007684;2.47e-27;15!UBERON:0003567;4.10e-18;2!UBERON:0003838;4.10e-18;2!UBERON:0003586;4.10e-18;2!UBERON:0005169;4.10e-18;2!UBERON:0002321;4.10e-18;2!UBERON:0005215;4.10e-18;2!UBERON:0002303;4.10e-18;2!UBERON:0002319;4.10e-18;2!UBERON:0001225;9.11e-12;12!UBERON:0008987;9.11e-12;12!UBERON:0005172;2.54e-11;52!UBERON:0005173;2.54e-11;52!UBERON:0004911;2.83e-10;1!UBERON:0001301;6.32e-10;1!UBERON:0003891;1.59e-09;4!UBERON:0001851;1.89e-09;15!UBERON:0000353;1.89e-09;15!UBERON:0002417;1.39e-07;58!UBERON:0000916;1.39e-07;58!UBERON:0003103;7.13e-07;61 | |||
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| ||
|short_description=p1@ENST00000558143 | |||
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Latest revision as of 15:53, 25 July 2015
Short description: | p1@ENST00000558143 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558143_5end |
Coexpression cluster: | C2401_serous_Renal_renal_signet_mesothelioma_kidney_clear |
Association with transcript: | -14bp_to_ENST00000558143_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.18e-41 | 10 |
nephron tubule epithelial cell | 4.18e-41 | 10 |
kidney cell | 2.05e-31 | 17 |
kidney epithelial cell | 2.05e-31 | 17 |
epithelial cell of nephron | 3.28e-27 | 15 |
mesangial cell | 6.35e-18 | 2 |
kidney interstitial cell | 6.35e-18 | 2 |
juxtaglomerular complex cell | 6.35e-18 | 2 |
renal interstitial pericyte | 6.35e-18 | 2 |
extraglomerular mesangial cell | 6.35e-18 | 2 |
kidney cortical cell | 1.18e-11 | 12 |
renal cortical epithelial cell | 1.18e-11 | 12 |
serous secreting cell | 2.59e-10 | 1 |
perirenal preadipocyte | 5.79e-10 | 1 |
pericyte cell | 1.97e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.59e-10 | 1 |