FFCP PHASE1:Hg19::chr1:31654245..31654256,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79570 | |EntrezGene=79570 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25743 | |HGNC=25743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=266bp_to_ENST00000528449_5end | |association_with_transcript=266bp_to_ENST00000528449_5end | ||
|cluster_id=chr1:31654245..31654256,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_NKAIN1_5end | |description=CAGE_peak_3_at_NKAIN1_5end | ||
|id=chr1:31654245..31654256,- | |id=chr1:31654245..31654256,- | ||
|ontology_enrichment_celltype=CL:0000540!5.51e-16!6;CL:0000031!5.51e-16!6;CL:0000404!5.51e-16!6;CL:0002322!7.59e-13!5;CL:0000047!9.46e-12!8;CL:0002319!1.89e-07!25;CL:0000133!2.54e-07!59 | |ontology_enrichment_celltype=CL:0000540!5.51e-16!6;CL:0000031!5.51e-16!6;CL:0000404!5.51e-16!6;CL:0002322!7.59e-13!5;CL:0000047!9.46e-12!8;CL:0002319!1.89e-07!25;CL:0000133!2.54e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000540;3.73e-38;6!CL:0000404;3.73e-38;6!CL:0002319;9.70e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.48e-38,6;CL:0000031,5.48e-38,6;CL:0000404,5.48e-38,6;CL:0000047,1.30e-28,8;CL:0002319,1.05e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.73e-38;6 | |||
|ontology_enrichment_disease=DOID:169!4.91e-09!6 | |ontology_enrichment_disease=DOID:169!4.91e-09!6 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.96e-42!94;UBERON:0001016!6.96e-42!94;UBERON:0001017!1.86e-41!82;UBERON:0005743!5.28e-39!86;UBERON:0001049!6.42e-38!57;UBERON:0005068!6.42e-38!57;UBERON:0006241!6.42e-38!57;UBERON:0007135!6.42e-38!57;UBERON:0002780!3.28e-31!41;UBERON:0001890!3.28e-31!41;UBERON:0006240!3.28e-31!41;UBERON:0003080!2.63e-30!42;UBERON:0002616!2.13e-29!59;UBERON:0000955!4.57e-29!69;UBERON:0006238!4.57e-29!69;UBERON:0001893!1.11e-26!34;UBERON:0004121!3.24e-26!169;UBERON:0000924!2.72e-25!173;UBERON:0006601!2.72e-25!173;UBERON:0003075!3.42e-25!86;UBERON:0007284!3.42e-25!86;UBERON:0002791!4.14e-25!33;UBERON:0002020!2.66e-24!34;UBERON:0003528!2.66e-24!34;UBERON:0002346!1.23e-23!90;UBERON:0001869!1.73e-23!32;UBERON:0002619!4.88e-23!22;UBERON:0001950!2.84e-22!20;UBERON:0007023!2.32e-21!115;UBERON:0003056!1.78e-20!61;UBERON:0000956!7.19e-20!25;UBERON:0000203!7.19e-20!25;UBERON:0000033!7.99e-17!123;UBERON:0000153!1.09e-16!129;UBERON:0007811!1.09e-16!129;UBERON:0002021!2.14e-12!5;UBERON:0001871!2.44e-10!7;UBERON:0000200!3.11e-09!6;UBERON:0003076!9.47e-09!15;UBERON:0003057!9.47e-09!15;UBERON:0002771!9.27e-08!3;UBERON:0002240!1.02e-07!3;UBERON:0000013!3.72e-07!5;UBERON:0002410!3.72e-07!5 | |ontology_enrichment_uberon=UBERON:0000073!6.96e-42!94;UBERON:0001016!6.96e-42!94;UBERON:0001017!1.86e-41!82;UBERON:0005743!5.28e-39!86;UBERON:0001049!6.42e-38!57;UBERON:0005068!6.42e-38!57;UBERON:0006241!6.42e-38!57;UBERON:0007135!6.42e-38!57;UBERON:0002780!3.28e-31!41;UBERON:0001890!3.28e-31!41;UBERON:0006240!3.28e-31!41;UBERON:0003080!2.63e-30!42;UBERON:0002616!2.13e-29!59;UBERON:0000955!4.57e-29!69;UBERON:0006238!4.57e-29!69;UBERON:0001893!1.11e-26!34;UBERON:0004121!3.24e-26!169;UBERON:0000924!2.72e-25!173;UBERON:0006601!2.72e-25!173;UBERON:0003075!3.42e-25!86;UBERON:0007284!3.42e-25!86;UBERON:0002791!4.14e-25!33;UBERON:0002020!2.66e-24!34;UBERON:0003528!2.66e-24!34;UBERON:0002346!1.23e-23!90;UBERON:0001869!1.73e-23!32;UBERON:0002619!4.88e-23!22;UBERON:0001950!2.84e-22!20;UBERON:0007023!2.32e-21!115;UBERON:0003056!1.78e-20!61;UBERON:0000956!7.19e-20!25;UBERON:0000203!7.19e-20!25;UBERON:0000033!7.99e-17!123;UBERON:0000153!1.09e-16!129;UBERON:0007811!1.09e-16!129;UBERON:0002021!2.14e-12!5;UBERON:0001871!2.44e-10!7;UBERON:0000200!3.11e-09!6;UBERON:0003076!9.47e-09!15;UBERON:0003057!9.47e-09!15;UBERON:0002771!9.27e-08!3;UBERON:0002240!1.02e-07!3;UBERON:0000013!3.72e-07!5;UBERON:0002410!3.72e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;3.46e-26;5!UBERON:0001950;5.49e-17;20!UBERON:0002619;1.63e-15;22!UBERON:0003112;2.06e-15;1!UBERON:0011158;2.06e-15;1!UBERON:0003128;2.06e-15;1!UBERON:0001703;2.06e-15;1!UBERON:0002241;2.06e-15;1!UBERON:0000956;9.96e-14;25!UBERON:0000203;9.96e-14;25!UBERON:0002791;8.82e-11;32!UBERON:0001869;1.10e-10;32!UBERON:0002780;1.22e-10;41!UBERON:0001890;1.22e-10;41!UBERON:0001893;9.06e-09;34!UBERON:0001897;2.31e-08;2!UBERON:0010225;2.31e-08;2!UBERON:0003528;7.00e-08;34!UBERON:0002020;7.00e-08;34!UBERON:0000922;3.68e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.79e-26,5;UBERON:0001950,5.14e-17,20;UBERON:0001017,3.89e-16,81;UBERON:0003112,1.34e-15,1;UBERON:0011158,1.34e-15,1;UBERON:0003128,1.34e-15,1;UBERON:0001703,1.34e-15,1;UBERON:0002241,1.34e-15,1;UBERON:0004761,1.34e-15,1;UBERON:0009617,1.34e-15,1;UBERON:0002619,1.53e-15,22;UBERON:0001016,1.85e-14,89;UBERON:0000956,9.44e-14,25;UBERON:0000203,9.44e-14,25;UBERON:0002780,5.38e-12,41;UBERON:0001890,5.38e-12,41;UBERON:0003080,5.38e-12,41;UBERON:0006240,5.38e-12,41;UBERON:0002791,7.80e-11,32;UBERON:0001869,7.80e-11,32;UBERON:0003528,3.25e-10,34;UBERON:0002020,3.25e-10,34;UBERON:0001893,3.25e-10,34;UBERON:0000073,2.88e-09,53;UBERON:0002616,2.88e-09,53;UBERON:0001049,9.20e-09,56;UBERON:0005068,9.20e-09,56;UBERON:0006241,9.20e-09,56;UBERON:0007135,9.20e-09,56;UBERON:0001897,1.73e-08,2;UBERON:0010225,1.73e-08,2;UBERON:0005253,1.86e-08,2;UBERON:0003056,4.97e-08,61;UBERON:0011216,9.19e-08,223;UBERON:0004121,3.98e-07,171;UBERON:0000924,3.98e-07,171;UBERON:0006601,3.98e-07,171;UBERON:0000955,4.49e-07,68;UBERON:0006238,4.49e-07,68 | |||
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|short_description=p3@NKAIN1 | |short_description=p3@NKAIN1 | ||
}} | }} |
Latest revision as of 12:53, 17 September 2015
Short description: | p3@NKAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NKAIN1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 266bp_to_ENST00000528449_5end |
EntrezGene: | NKAIN1 |
HGNC: | 25743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.48e-38 | 6 |
neuroblast | 5.48e-38 | 6 |
electrically signaling cell | 5.48e-38 | 6 |
neuronal stem cell | 1.30e-28 | 8 |
neural cell | 1.05e-08 | 25 |