FFCP PHASE1:Hg19::chr17:46692624..46692659,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:46692624..46692659,-
|short_description=p3@HOXB8
|description=CAGE_peak_3_at_HOXB8_5end
|association_with_transcript=0bp_to_ENST00000239144_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3218 | |EntrezGene=3218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5119 | |HGNC=5119 | ||
|TSSclassifier=strong | |||
|UniProt=P17481 | |UniProt=P17481 | ||
|association_with_transcript=0bp_to_ENST00000239144_5end | |||
|cluster_id=chr17:46692624..46692659,- | |||
|coexpression_cluster_id=C1783 | |||
|description=CAGE_peak_3_at_HOXB8_5end | |||
|id=chr17:46692624..46692659,- | |||
|ontology_enrichment_celltype=CL:1000507!4.45e-13!12;CL:1000494!4.45e-13!12;CL:1000497!7.87e-13!18;CL:0002518!7.87e-13!18;CL:1000449!1.23e-12!16;CL:0002681!3.91e-09!13;CL:0002584!3.91e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.33e-29;10!CL:1000494;8.33e-29;10!CL:1000497;3.29e-27;17!CL:0002518;3.29e-27;17!CL:1000449;2.62e-26;15!CL:0002681;3.03e-18;12!CL:0002584;3.03e-18;12!CL:0000239;6.78e-10;3!CL:1000615;6.78e-10;3!CL:0002306;6.78e-10;3!CL:0002564;2.49e-09;3!CL:0000650;6.40e-07;2!CL:1000500;6.40e-07;2!CL:1000618;6.40e-07;2!CL:1001318;6.40e-07;2!CL:0002173;6.40e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.06e-28,10;CL:1000494,1.06e-28,10;CL:1000497,4.53e-27,17;CL:0002518,4.53e-27,17;CL:1000449,3.74e-26,15;CL:0002681,3.97e-18,12;CL:0002584,3.97e-18,12;CL:0000239,6.49e-10,3;CL:1000615,6.49e-10,3;CL:0002306,6.49e-10,3;CL:0002564,3.44e-09,3;CL:0000650,7.67e-07,2;CL:1000500,7.67e-07,2;CL:1000618,7.67e-07,2;CL:1001318,7.67e-07,2;CL:0002173,7.67e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;7.39e-11;3!UBERON:0003057;7.39e-11;3!UBERON:0007297;9.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!9.48e-20!32;UBERON:0000080!3.97e-15!18;UBERON:0002120!3.97e-15!18;UBERON:0004875!3.97e-15!18;UBERON:0005721!3.97e-15!18;UBERON:0005754!3.97e-15!18;UBERON:0007297!3.97e-15!18;UBERON:0002113!1.33e-14!27;UBERON:0003918!1.33e-14!27;UBERON:0005095!1.33e-14!27;UBERON:0007687!1.33e-14!27;UBERON:0003887!6.98e-14!21;UBERON:0006555!7.26e-14!17;UBERON:0005103!7.26e-14!17;UBERON:0000083!7.26e-14!17;UBERON:0009201!7.26e-14!17;UBERON:0004819!7.26e-14!17;UBERON:0006553!7.26e-14!17;UBERON:0003074!7.26e-14!17;UBERON:0003060!7.26e-14!17;UBERON:0004876!4.21e-13!20;UBERON:0009773!4.45e-13!12;UBERON:0001231!4.45e-13!12;UBERON:0004810!4.45e-13!12;UBERON:0001008!5.01e-13!45;UBERON:0004211!1.23e-12!16;UBERON:0001285!1.23e-12!16;UBERON:0007684!1.23e-12!16;UBERON:0003220!1.23e-12!16;UBERON:0004208!1.23e-12!16;UBERON:0006554!2.68e-12!44;UBERON:0000058!3.05e-12!26;UBERON:0002417!9.57e-12!61;UBERON:0000916!9.57e-12!61;UBERON:0005177!3.55e-11!107;UBERON:0003886!5.55e-11!63;UBERON:0002553!9.22e-10!70;UBERON:0005172!1.21e-09!55;UBERON:0005173!1.21e-09!55;UBERON:0003064!1.78e-09!37;UBERON:0001225!3.91e-09!13;UBERON:0008987!3.91e-09!13;UBERON:0000464!3.53e-08!104;UBERON:0005174!2.00e-07!5;UBERON:0001137!2.00e-07!5;UBERON:0009569!2.84e-07!113;UBERON:0000466!3.85e-07!126;UBERON:0001851!6.60e-07!16;UBERON:0003586!9.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;2.43e-30;29!UBERON:0004211;8.33e-29;10!UBERON:0009773;8.33e-29;10!UBERON:0001231;8.33e-29;10!UBERON:0004810;8.33e-29;10!UBERON:0006555;2.62e-26;15!UBERON:0004819;2.62e-26;15!UBERON:0001285;2.62e-26;15!UBERON:0007684;2.62e-26;15!UBERON:0002113;3.31e-25;24!UBERON:0011143;3.31e-25;24!UBERON:0006554;2.13e-19;30!UBERON:0001008;2.13e-19;30!UBERON:0001225;3.03e-18;12!UBERON:0008987;3.03e-18;12!UBERON:0001851;2.98e-14;15!UBERON:0000353;2.98e-14;15!UBERON:0002417;1.46e-12;58!UBERON:0000916;1.46e-12;58!UBERON:0005172;2.12e-11;52!UBERON:0005173;2.12e-11;52!UBERON:0006947;7.27e-11;3!UBERON:0004054;7.27e-11;3!UBERON:0002240;7.39e-11;3!UBERON:0005174;7.39e-11;3!UBERON:0001137;7.39e-11;3!UBERON:0006853;6.78e-10;3!UBERON:0007685;6.78e-10;3!UBERON:0004134;6.78e-10;3!UBERON:0011135;2.14e-09;5!UBERON:0002216;2.14e-09;5!UBERON:0011134;2.14e-09;5!UBERON:0002209;2.14e-09;5!UBERON:0002213;2.14e-09;5!UBERON:0007844;2.14e-09;5!UBERON:0011138;2.14e-09;5!UBERON:0001130;2.14e-09;5!UBERON:0001066;2.14e-09;5!UBERON:0001468;2.14e-09;5!UBERON:0002242;2.49e-09;3!UBERON:0004905;7.47e-09;8!UBERON:0000982;7.47e-09;8!UBERON:0004770;7.47e-09;8!UBERON:0005904;3.14e-08;4!UBERON:0003688;7.75e-08;6!UBERON:0002358;7.75e-08;6!UBERON:0003684;7.75e-08;6!UBERON:0001178;7.75e-08;6!UBERON:0004457;7.80e-08;9!UBERON:0000042;7.80e-08;9!UBERON:0003567;6.40e-07;2!UBERON:0003838;6.40e-07;2!UBERON:0003586;6.40e-07;2!UBERON:0005169;6.40e-07;2!UBERON:0002321;6.40e-07;2!UBERON:0005215;6.40e-07;2!UBERON:0002303;6.40e-07;2!UBERON:0002319;6.40e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.48e-35,31;UBERON:0002113,3.63e-30,26;UBERON:0003918,3.63e-30,26;UBERON:0011143,3.63e-30,26;UBERON:0005095,3.63e-30,26;UBERON:0007687,3.63e-30,26;UBERON:0006555,5.69e-29,16;UBERON:0004819,5.69e-29,16;UBERON:0004810,1.06e-28,10;UBERON:0004211,3.74e-26,15;UBERON:0009773,3.74e-26,15;UBERON:0001231,3.74e-26,15;UBERON:0001285,3.74e-26,15;UBERON:0007684,3.74e-26,15;UBERON:0004208,3.74e-26,15;UBERON:0002417,6.88e-25,60;UBERON:0000916,6.88e-25,60;UBERON:0005172,1.45e-19,54;UBERON:0005173,1.45e-19,54;UBERON:0001225,3.97e-18,12;UBERON:0008987,3.97e-18,12;UBERON:0006554,1.59e-16,47;UBERON:0001008,4.38e-16,48;UBERON:0001851,3.68e-14,15;UBERON:0000353,3.68e-14,15;UBERON:0009569,5.30e-14,112;UBERON:0003103,3.44e-13,68;UBERON:0005177,1.31e-12,101;UBERON:0000080,1.75e-11,9;UBERON:0002120,1.75e-11,9;UBERON:0004875,1.75e-11,9;UBERON:0005721,1.75e-11,9;UBERON:0005754,1.75e-11,9;UBERON:0007297,1.75e-11,9;UBERON:0002240,7.29e-11,3;UBERON:0005174,7.29e-11,3;UBERON:0006947,7.29e-11,3;UBERON:0001137,7.29e-11,3;UBERON:0004054,7.29e-11,3;UBERON:0006853,6.49e-10,3;UBERON:0007685,6.49e-10,3;UBERON:0004134,6.49e-10,3;UBERON:0011135,2.52e-09,5;UBERON:0002216,2.52e-09,5;UBERON:0011134,2.52e-09,5;UBERON:0002209,2.52e-09,5;UBERON:0002213,2.52e-09,5;UBERON:0005856,2.52e-09,5;UBERON:0005866,2.52e-09,5;UBERON:0005863,2.52e-09,5;UBERON:0007844,2.52e-09,5;UBERON:0011138,2.52e-09,5;UBERON:0001130,2.52e-09,5;UBERON:0001066,2.52e-09,5;UBERON:0001468,2.52e-09,5;UBERON:0004876,2.87e-09,11;UBERON:0002242,3.44e-09,3;UBERON:0003068,3.44e-09,3;UBERON:0002328,3.44e-09,3;UBERON:0004880,3.44e-09,3;UBERON:0000058,3.81e-09,19;UBERON:0005103,5.75e-09,8;UBERON:0000083,5.75e-09,8;UBERON:0009201,5.75e-09,8;UBERON:0006553,5.75e-09,8;UBERON:0003074,5.75e-09,8;UBERON:0003060,5.75e-09,8;UBERON:0004905,7.48e-09,8;UBERON:0000982,7.48e-09,8;UBERON:0004770,7.48e-09,8;UBERON:0003887,1.95e-08,12;UBERON:0005904,3.15e-08,4;UBERON:0003688,1.09e-07,6;UBERON:0002358,1.09e-07,6;UBERON:0003684,1.09e-07,6;UBERON:0001178,1.09e-07,6;UBERON:0003567,7.67e-07,2;UBERON:0003838,7.67e-07,2;UBERON:0003586,7.67e-07,2;UBERON:0005169,7.67e-07,2;UBERON:0002321,7.67e-07,2;UBERON:0005215,7.67e-07,2;UBERON:0002303,7.67e-07,2;UBERON:0002319,7.67e-07,2;UBERON:0003104,7.74e-07,160;UBERON:0009142,7.74e-07,160 | |||
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| ||
|short_description=p3@HOXB8 | |||
}} | }} |
Latest revision as of 07:35, 25 September 2015
Short description: | p3@HOXB8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB8_5end |
Coexpression cluster: | C1783_alveolar_nonsmall_ductus_spinal_seminal_epididymis_somatostatinoma |
Association with transcript: | 0bp_to_ENST00000239144_5end |
EntrezGene: | HOXB8 |
HGNC: | 5119 |
UniProt: | P17481 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.06e-28 | 10 |
nephron tubule epithelial cell | 1.06e-28 | 10 |
kidney cell | 4.53e-27 | 17 |
kidney epithelial cell | 4.53e-27 | 17 |
epithelial cell of nephron | 3.74e-26 | 15 |
kidney cortical cell | 3.97e-18 | 12 |
renal cortical epithelial cell | 3.97e-18 | 12 |
brush border epithelial cell | 6.49e-10 | 3 |
kidney cortex tubule cell | 6.49e-10 | 3 |
epithelial cell of proximal tubule | 6.49e-10 | 3 |
nucleus pulposus cell of intervertebral disc | 3.44e-09 | 3 |
mesangial cell | 7.67e-07 | 2 |
kidney interstitial cell | 7.67e-07 | 2 |
juxtaglomerular complex cell | 7.67e-07 | 2 |
renal interstitial pericyte | 7.67e-07 | 2 |
extraglomerular mesangial cell | 7.67e-07 | 2 |