FFCP PHASE1:Hg19::chr19:42547060..42547064,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2901 | |EntrezGene=2901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4583 | |HGNC=4583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc002osi.1_5end | |association_with_transcript=-7bp_to_uc002osi.1_5end | ||
|cluster_id=chr19:42547060..42547064,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_4_at_GRIK5_5end | |description=CAGE_peak_4_at_GRIK5_5end | ||
|id=chr19:42547060..42547064,- | |id=chr19:42547060..42547064,- | ||
|ontology_enrichment_celltype=CL:0000540!2.23e-07!6;CL:0000031!2.23e-07!6;CL:0000404!2.23e-07!6 | |ontology_enrichment_celltype=CL:0000540!2.23e-07!6;CL:0000031!2.23e-07!6;CL:0000404!2.23e-07!6 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.74e-88;3 | |||
|ontology_enrichment_disease=DOID:178!9.05e-11!1;DOID:326!9.05e-11!1;DOID:3978!9.05e-11!1;DOID:3394!9.05e-11!1;DOID:5844!9.05e-11!1 | |ontology_enrichment_disease=DOID:178!9.05e-11!1;DOID:326!9.05e-11!1;DOID:3978!9.05e-11!1;DOID:3394!9.05e-11!1;DOID:5844!9.05e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.22e-44;6!UBERON:0002680;3.09e-30;9!UBERON:0001895;3.09e-30;9!UBERON:0004733;5.13e-23;12!UBERON:0002028;5.13e-23;12!UBERON:0004732;2.40e-21;13!UBERON:0001871;8.99e-11;6!UBERON:0001016;1.15e-07;83!UBERON:0000073;2.51e-07;53!UBERON:0002616;2.51e-07;53!UBERON:0001017;2.51e-07;75 | |||
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|short_description=p4@GRIK5 | |short_description=p4@GRIK5 | ||
}} | }} |
Latest revision as of 07:40, 18 September 2015
Short description: | p4@GRIK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRIK5_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | -7bp_to_uc002osi.1_5end |
EntrezGene: | GRIK5 |
HGNC: | 4583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-44 | 6 |
rhombic lip | 1.22e-44 | 6 |
regional part of metencephalon | 3.09e-30 | 9 |
metencephalon | 3.09e-30 | 9 |
future metencephalon | 3.09e-30 | 9 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
temporal lobe | 8.99e-11 | 6 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |