FFCP PHASE1:Hg19::chr2:133993640..133993643,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:133993640..133993643,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr2:133993640..133993643,- | |description=CAGE_peak_at_chr2:133993640..133993643,- | ||
|id=chr2:133993640..133993643,- | |id=chr2:133993640..133993643,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.83e-18;1!UBERON:0003056;7.08e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;1.33e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.37e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-14!57;UBERON:0005068!1.71e-14!57;UBERON:0006241!1.71e-14!57;UBERON:0007135!1.71e-14!57;UBERON:0002780!4.55e-13!41;UBERON:0001890!4.55e-13!41;UBERON:0006240!4.55e-13!41;UBERON:0002346!4.57e-13!90;UBERON:0003080!1.28e-12!42;UBERON:0002616!1.97e-12!59;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0001017!4.90e-11!82;UBERON:0000073!5.30e-11!94;UBERON:0001016!5.30e-11!94;UBERON:0005743!5.61e-11!86;UBERON:0003075!5.81e-11!86;UBERON:0007284!5.81e-11!86;UBERON:0001893!4.21e-10!34;UBERON:0007023!8.17e-10!115;UBERON:0003056!1.82e-09!61;UBERON:0002791!3.05e-09!33;UBERON:0002020!6.72e-09!34;UBERON:0003528!6.72e-09!34;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0001869!3.14e-08!32;UBERON:0000033!1.92e-07!123;UBERON:0000924!3.34e-07!173;UBERON:0006601!3.34e-07!173;UBERON:0002298!3.45e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!1.71e-14!57;UBERON:0005068!1.71e-14!57;UBERON:0006241!1.71e-14!57;UBERON:0007135!1.71e-14!57;UBERON:0002780!4.55e-13!41;UBERON:0001890!4.55e-13!41;UBERON:0006240!4.55e-13!41;UBERON:0002346!4.57e-13!90;UBERON:0003080!1.28e-12!42;UBERON:0002616!1.97e-12!59;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0001017!4.90e-11!82;UBERON:0000073!5.30e-11!94;UBERON:0001016!5.30e-11!94;UBERON:0005743!5.61e-11!86;UBERON:0003075!5.81e-11!86;UBERON:0007284!5.81e-11!86;UBERON:0001893!4.21e-10!34;UBERON:0007023!8.17e-10!115;UBERON:0003056!1.82e-09!61;UBERON:0002791!3.05e-09!33;UBERON:0002020!6.72e-09!34;UBERON:0003528!6.72e-09!34;UBERON:0000153!1.84e-08!129;UBERON:0007811!1.84e-08!129;UBERON:0001869!3.14e-08!32;UBERON:0000033!1.92e-07!123;UBERON:0000924!3.34e-07!173;UBERON:0006601!3.34e-07!173;UBERON:0002298!3.45e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.37e-34;2!UBERON:0002757;2.37e-34;2!UBERON:0010134;2.37e-34;2!UBERON:0005408;2.37e-34;2!UBERON:0001899;2.37e-34;2!UBERON:0000941;4.83e-18;1!UBERON:0001785;4.83e-18;1!UBERON:0002464;4.83e-18;1!UBERON:0004904;4.83e-18;1!UBERON:0001021;4.83e-18;1!UBERON:0003296;9.91e-18;4!UBERON:0010133;9.91e-18;4!UBERON:0002784;9.91e-18;4!UBERON:0002038;1.03e-17;1!UBERON:0009661;1.03e-17;1!UBERON:0002950;1.03e-17;1!UBERON:0001891;1.03e-17;1!UBERON:0002346;1.33e-17;4!UBERON:0000923;1.33e-17;4!UBERON:0010316;1.33e-17;4!UBERON:0005291;1.33e-17;4!UBERON:0002050;2.75e-14;5!UBERON:0005423;2.75e-14;5!UBERON:0001894;1.50e-10;7!UBERON:0003714;1.07e-09;2!UBERON:0005162;1.07e-09;2!UBERON:0000122;1.07e-09;2!UBERON:0002114;9.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.59e-34,2;UBERON:0002757,2.59e-34,2;UBERON:0010134,2.59e-34,2;UBERON:0005408,2.59e-34,2;UBERON:0001899,2.59e-34,2;UBERON:0000941,4.44e-18,1;UBERON:0001785,4.44e-18,1;UBERON:0002464,4.44e-18,1;UBERON:0004904,4.44e-18,1;UBERON:0001021,4.44e-18,1;UBERON:0003902,4.44e-18,1;UBERON:0005425,4.44e-18,1;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0002038,1.70e-17,1;UBERON:0009661,1.70e-17,1;UBERON:0002950,1.70e-17,1;UBERON:0001891,1.70e-17,1;UBERON:0009616,1.70e-17,1;UBERON:0010286,1.70e-17,1;UBERON:0001894,1.53e-10,7;UBERON:0006222,1.53e-10,7;UBERON:0003714,1.03e-09,2;UBERON:0005162,1.03e-09,2;UBERON:0000122,1.03e-09,2;UBERON:0002346,6.09e-09,86;UBERON:0002114,7.70e-07,2 | |||
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| ||
|short_description=p@chr2:133993640..133993643,- | |short_description=p@chr2:133993640..133993643,- | ||
}} | }} |
Latest revision as of 00:27, 29 July 2015
Short description: | p@chr2:133993640..133993643, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133993640..133993643, - |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.59e-34 | 2 |
regional part of epithalamus | 2.59e-34 | 2 |
secretory circumventricular organ | 2.59e-34 | 2 |
circumventricular organ | 2.59e-34 | 2 |
epithalamus | 2.59e-34 | 2 |
cranial nerve II | 4.44e-18 | 1 |
cranial nerve | 4.44e-18 | 1 |
nerve trunk | 4.44e-18 | 1 |
nerve connecting eye with brain | 4.44e-18 | 1 |
nerve | 4.44e-18 | 1 |
retinal neural layer | 4.44e-18 | 1 |
presumptive neural retina | 4.44e-18 | 1 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
substantia nigra | 1.70e-17 | 1 |
midbrain nucleus | 1.70e-17 | 1 |
regional part of midbrain | 1.70e-17 | 1 |
midbrain | 1.70e-17 | 1 |
presumptive midbrain | 1.70e-17 | 1 |
midbrain neural tube | 1.70e-17 | 1 |
diencephalon | 1.53e-10 | 7 |
future diencephalon | 1.53e-10 | 7 |
neural tissue | 1.03e-09 | 2 |
multi cell component structure | 1.03e-09 | 2 |
neuron projection bundle | 1.03e-09 | 2 |
neurectoderm | 6.09e-09 | 86 |
duodenum | 7.70e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.37e-07 | 10 |