FF:11882-125D1: Difference between revisions

Latest revision as of 18:26, 4 June 2020

Name:	CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs13544
Sample type:	primary cells
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	NA
dev stage	NA
sex	female
age	21
cell type	monocyte
cell line	NA
company	NA
collaboration	Christine Wells (University of Queensland)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	D5-3
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005810

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs13544		CAGE		DRX008158		DRR009030

Accession ID Hg19

Library id		BAM		CTSS
CNhs13544		DRZ000455		DRZ001840

Accession ID Hg38

Library id		BAM		CTSS
CNhs13544		DRZ011805		DRZ013190

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0.606
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.151
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.53
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.44
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0854
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.0854
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.157
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.651
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0854
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.667
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0.401
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0.0854
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.441
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.457
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.141
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.793
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.157
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0.457
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.147
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.319
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0.0854
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.00565
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0.23
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.882
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0.557
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.826
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.629
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.629
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.951
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.557
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0.319
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.62
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.402
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0.863
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.544
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.773
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.796
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.362
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.837
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.218
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.401
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.606
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0.218
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.401
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0.272
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0.793
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	1.005
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.157
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.218
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0.471
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0.319
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13544

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	6.60303e-10
MA0003.1	MA0003.1	0.622
MA0004.1	MA0004.1	0.111
MA0006.1	MA0006.1	0.634
MA0007.1	MA0007.1	0.839
MA0009.1	MA0009.1	0.594
MA0014.1	MA0014.1	0.453
MA0017.1	MA0017.1	0.0978
MA0018.2	MA0018.2	0.0378
MA0019.1	MA0019.1	0.95
MA0024.1	MA0024.1	0.00368
MA0025.1	MA0025.1	6.34924e-4
MA0027.1	MA0027.1	0.806
MA0028.1	MA0028.1	0.456
MA0029.1	MA0029.1	0.174
MA0030.1	MA0030.1	0.444
MA0031.1	MA0031.1	0.63
MA0035.2	MA0035.2	0.247
MA0038.1	MA0038.1	0.582
MA0039.2	MA0039.2	0.63
MA0040.1	MA0040.1	0.186
MA0041.1	MA0041.1	0.619
MA0042.1	MA0042.1	0.913
MA0043.1	MA0043.1	3.64922e-8
MA0046.1	MA0046.1	0.029
MA0047.2	MA0047.2	0.777
MA0048.1	MA0048.1	0.733
MA0050.1	MA0050.1	1.71127e-16
MA0051.1	MA0051.1	4.40764e-10
MA0052.1	MA0052.1	0.0144
MA0055.1	MA0055.1	0.633
MA0057.1	MA0057.1	0.575
MA0058.1	MA0058.1	0.0171
MA0059.1	MA0059.1	0.0647
MA0060.1	MA0060.1	1.26747e-6
MA0061.1	MA0061.1	7.29259e-9
MA0062.2	MA0062.2	0.058
MA0065.2	MA0065.2	0.0114
MA0066.1	MA0066.1	0.0307
MA0067.1	MA0067.1	2.29024e-7
MA0068.1	MA0068.1	0.763
MA0069.1	MA0069.1	0.493
MA0070.1	MA0070.1	0.0271
MA0071.1	MA0071.1	0.44
MA0072.1	MA0072.1	0.71
MA0073.1	MA0073.1	0.376
MA0074.1	MA0074.1	0.156
MA0076.1	MA0076.1	0.524
MA0077.1	MA0077.1	0.139
MA0078.1	MA0078.1	0.492
MA0079.2	MA0079.2	0.251
MA0080.2	MA0080.2	1.53982e-12
MA0081.1	MA0081.1	2.81828e-4
MA0083.1	MA0083.1	0.347
MA0084.1	MA0084.1	0.794
MA0087.1	MA0087.1	0.99
MA0088.1	MA0088.1	0.747
MA0090.1	MA0090.1	0.33
MA0091.1	MA0091.1	0.733
MA0092.1	MA0092.1	0.334
MA0093.1	MA0093.1	0.128
MA0099.2	MA0099.2	4.07564e-45
MA0100.1	MA0100.1	0.974
MA0101.1	MA0101.1	2.32834e-8
MA0102.2	MA0102.2	9.63961e-8
MA0103.1	MA0103.1	0.0983
MA0104.2	MA0104.2	0.132
MA0105.1	MA0105.1	1.66105e-12
MA0106.1	MA0106.1	0.773
MA0107.1	MA0107.1	6.87709e-10
MA0108.2	MA0108.2	0.47
MA0111.1	MA0111.1	0.666
MA0112.2	MA0112.2	8.98939e-5
MA0113.1	MA0113.1	0.708
MA0114.1	MA0114.1	0.223
MA0115.1	MA0115.1	0.562
MA0116.1	MA0116.1	4.73235e-4
MA0117.1	MA0117.1	0.0286
MA0119.1	MA0119.1	0.236
MA0122.1	MA0122.1	0.712
MA0124.1	MA0124.1	0.416
MA0125.1	MA0125.1	0.31
MA0131.1	MA0131.1	0.545
MA0135.1	MA0135.1	0.612
MA0136.1	MA0136.1	5.41319e-15
MA0137.2	MA0137.2	1.24682e-13
MA0138.2	MA0138.2	0.293
MA0139.1	MA0139.1	0.964
MA0140.1	MA0140.1	0.242
MA0141.1	MA0141.1	0.14
MA0142.1	MA0142.1	0.8
MA0143.1	MA0143.1	0.989
MA0144.1	MA0144.1	7.55928e-6
MA0145.1	MA0145.1	0.451
MA0146.1	MA0146.1	0.327
MA0147.1	MA0147.1	0.253
MA0148.1	MA0148.1	0.992
MA0149.1	MA0149.1	0.262
MA0150.1	MA0150.1	8.12196e-23
MA0152.1	MA0152.1	0.736
MA0153.1	MA0153.1	0.00696
MA0154.1	MA0154.1	0.00128
MA0155.1	MA0155.1	0.952
MA0156.1	MA0156.1	1.50628e-11
MA0157.1	MA0157.1	0.78
MA0159.1	MA0159.1	0.0228
MA0160.1	MA0160.1	0.0237
MA0162.1	MA0162.1	0.7
MA0163.1	MA0163.1	4.97154e-7
MA0164.1	MA0164.1	0.694
MA0258.1	MA0258.1	0.00894
MA0259.1	MA0259.1	0.876

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs13544

Novel motif	Logo	P-value
1	1	0.0925
10	10	0.0203
100	100	0.903
101	101	0.753
102	102	0.96
103	103	0.345
104	104	0.53
105	105	0.152
106	106	0.0016
107	107	0.381
108	108	0.7
109	109	0.225
11	11	0.199
110	110	0.131
111	111	0.073
112	112	0.363
113	113	0.591
114	114	0.0244
115	115	0.197
116	116	0.927
117	117	0.0687
118	118	0.204
119	119	0.181
12	12	0.293
120	120	0.481
121	121	0.408
122	122	0.546
123	123	0.518
124	124	0.868
125	125	0.47
126	126	0.213
127	127	0.42
128	128	0.0609
129	129	0.458
13	13	0.0766
130	130	0.268
131	131	0.988
132	132	0.0496
133	133	0.803
134	134	0.734
135	135	0.522
136	136	0.993
137	137	0.013
138	138	0.306
139	139	0.0861
14	14	0.491
140	140	0.498
141	141	0.26
142	142	0.0663
143	143	0.0323
144	144	0.724
145	145	0.414
146	146	0.737
147	147	0.512
148	148	0.0261
149	149	0.884
15	15	0.161
150	150	0.419
151	151	0.381
152	152	0.292
153	153	0.899
154	154	0.609
155	155	0.816
156	156	0.39
157	157	0.753
158	158	0.0364
159	159	0.168
16	16	0.358
160	160	0.511
161	161	0.527
162	162	0.159
163	163	0.161
164	164	0.15
165	165	0.195
166	166	0.523
167	167	0.156
168	168	0.165
169	169	0.0121
17	17	0.324
18	18	0.187
19	19	0.491
2	2	0.511
20	20	0.243
21	21	0.655
22	22	0.287
23	23	0.0597
24	24	0.293
25	25	0.329
26	26	0.0716
27	27	0.651
28	28	0.448
29	29	0.192
3	3	0.194
30	30	0.509
31	31	0.821
32	32	0.507
33	33	0.232
34	34	0.716
35	35	0.198
36	36	0.0808
37	37	0.0699
38	38	0.443
39	39	0.971
4	4	0.845
40	40	0.206
41	41	0.0121
42	42	0.429
43	43	0.0314
44	44	0.769
45	45	0.87
46	46	0.212
47	47	0.609
48	48	0.535
49	49	0.171
5	5	0.267
50	50	0.891
51	51	0.503
52	52	0.481
53	53	0.605
54	54	0.427
55	55	0.71
56	56	0.764
57	57	0.946
58	58	0.163
59	59	0.375
6	6	0.837
60	60	0.0696
61	61	0.782
62	62	0.0796
63	63	0.647
64	64	0.434
65	65	0.298
66	66	0.373
67	67	0.56
68	68	0.937
69	69	0.452
7	7	0.245
70	70	0.0538
71	71	0.0307
72	72	0.171
73	73	0.168
74	74	0.0875
75	75	0.116
76	76	0.229
77	77	0.697
78	78	0.114
79	79	0.733
8	8	0.504
80	80	0.151
81	81	0.408
82	82	0.29
83	83	0.00571
84	84	0.42
85	85	0.0405
86	86	0.0582
87	87	0.493
88	88	0.587
89	89	0.232
9	9	0.452
90	90	0.101
91	91	0.312
92	92	0.317
93	93	0.244
94	94	0.0739
95	95	0.337
96	96	0.619
97	97	0.714
98	98	0.194
99	99	0.0282

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs13544

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0011444 CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000219 (motile cell)
0000325 (stuff accumulating cell)
0000473 (defensive cell)
0000234 (phagocyte)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0000255 (eukaryotic cell)
0000576 (monocyte)
0000860 (classical monocyte)
0002057 (CD14-positive, CD16-negative classical monocyte)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000625 (experimental infection sample)
0000350 (experimentally modified sample)
0000631 (trehalose dimycolate (TDM) treatment sample)
0011444 (CD14-positive monocytes - treated with Trehalose dimycolate (TDM) sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
CL:0002057 (CD14-positive, CD16-negative classical monocyte)

@@ Line 1: / Line 1: @@
 {{f5samples
-|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000062,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000479,UBERON:0000480,UBERON:0000922,UBERON:0000923,UBERON:0000926,UBERON:0001062,UBERON:0001434,UBERON:0001474,UBERON:0002050,UBERON:0002193,UBERON:0002204,UBERON:0002371,UBERON:0002384,UBERON:0002390,UBERON:0002405,UBERON:0002532,UBERON:0004120,UBERON:0004765,UBERON:0005423
+|DRA_sample_Accession=CAGE@SAMD00005810
-|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000040,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000557,CL:0000559,CL:0000566,CL:0000576,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000837,CL:0000839,CL:0000860,CL:0000988,CL:0001012,CL:0002009,CL:0002031,CL:0002032,CL:0002057,CL:0002087,CL:0002194,CL:0002320,CL:0002371
+|accession_numbers=CAGE;DRX008158;DRR009030;DRZ000455;DRZ001840;DRZ011805;DRZ013190
+|ancestors_in_anatomy_facet=
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000219,CL:0000325,CL:0000473,CL:0000234,CL:0000738,CL:0002087,CL:0000255,CL:0000576,CL:0000860,CL:0002057
 |ancestors_in_disease_facet=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000625,FF:0000350,FF:0000631,FF:0011444
 |comment=
 |created_by=
 |creation_date=
+|data_phase=2
+|datafreeze_phase=2
 |def=
 |expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!3.95!8845.02!PLEK;;chr16:85932760..85932775,+!p1@IRF8!3.06!1142.41!IRF8;;chr10:35484053..35484076,+!p1@CREM!2.70!1201.49!CREM;;chr10:64576105..64576133,-!p1@EGR2!2.69!976.05!EGR2;;chr11:47400078..47400106,-!p1@SPI1!2.62!415.48!SPI1;;chr7:115670804..115670825,-!p1@TFEC!2.47!291.68!TFEC;;chr12:54778471..54778528,-!p1@ZNF385A!2.29!193.73!ZNF385A;;chr11:64764435..64764449,-!p1@BATF2!2.20!213.06!BATF2;;chr1:158985493..158985535,+!p4@IFI16!2.14!205.68!IFI16;;chr6:106534192..106534224,+!p1@PRDM1!2.07!314.92!PRDM1;;chr11:47399947..47399961,-!p3@SPI1!2.06!112.72!SPI1;;chr20:39317868..39317884,-!p1@MAFB!2.05!1245.80!MAFB;;chr21:36260295..36260310,-!p3@RUNX1!2.05!175.49!RUNX1;;chr2:68592394..68592405,+!p2@PLEK!2.04!108.38!PLEK;;chr10:35484090..35484104,+!p6@CREM!2.04!107.94!CREM;;chr16:31885093..31885165,+!p1@ZNF267!2.02!1486.87!ZNF267;;chr19:45971246..45971265,+!p1@FOSB!2.01!1769.87!FOSB;;chr6:36355431..36355466,-!p1@ETV7!2.01!101.43!ETV7;;chr21:34442439..34442455,+!p1@OLIG1!1.98!94.48!OLIG1;;chr10:31288398..31288455,-!p2@ZNF438!1.93!97.30!ZNF438;;chr11:47400062..47400077,-!p2@SPI1!1.93!84.05!SPI1;;chr5:131826457..131826514,-!p1@IRF1!1.91!2956.59!IRF1;;chr17:45810594..45810608,+!p1@TBX21!1.89!76.67!TBX21;;chr21:30671690..30671762,+!p2@BACH1!1.88!241.73!BACH1;;chr10:64018918..64018936,+!p2@ZNF365!1.88!75.36!ZNF365;;chr8:22550982..22550999,-!p1@EGR3!1.83!180.05!EGR3;;chr6:106534230..106534254,+!p2@PRDM1!1.81!155.94!PRDM1;;chr2:231084639..231084654,-!p2@SP110!1.79!99.26!SP110;;chr2:157189180..157189290,-!p1@NR4A2!1.78!294.29!NR4A2;;chr1:158979872..158979898,+!p3@IFI16!1.78!174.40!IFI16;;chr2:145277640..145277771,-!p1@ZEB2!1.77!735.18!ZEB2;;chr11:65430554..65430579,-!p3@RELA!1.76!139.87!RELA;;chr14:75988831..75988847,+!p2@BATF!1.74!53.43!BATF;;chr10:31288370..31288393,-!p3@ZNF438!1.73!52.99!ZNF438;;chr22:38597987..38598021,+!p2@MAFF!1.72!299.72!MAFF;;chr12:72056800..72056834,+!p1@THAP2!1.72!67.76!THAP2;;chr11:615942..615957,-!p1@IRF7!1.71!449.15!IRF7;;chr2:231090471..231090504,+!p2@SP140!1.71!49.74!SP140;;chr7:128577972..128578047,+!p1@IRF5!1.70!76.23!IRF5;;chr2:97202480..97202499,+!p1@ARID5A!1.69!456.31!ARID5A;;chr11:47399996..47400014,-!p4@SPI1!1.68!46.91!SPI1;;chr21:30671235..30671253,+!p1@BACH1!1.66!536.67!BACH1;;chr1:25256756..25256774,-!p1@RUNX3!1.66!82.53!RUNX3;;chr11:47400032..47400043,-!p5@SPI1!1.66!44.31!SPI1;;chr1:212782094..212782109,+!p1@ATF3!1.65!1111.14!ATF3;;chr21:36421535..36421610,-!p2@RUNX1!1.64!145.08!RUNX1;;chr3:12329397..12329433,+!p2@PPARG!1.64!95.35!PPARG;;chr2:70142232..70142251,+!p1@MXD1!1.63!224.57!MXD1;;chr19:33793430..33793447,-!p1@CEBPA!1.62!163.33!CEBPA;;chr1:221052733..221052749,+!p2@HLX!1.61!51.26!HLX;;chr12:54778351..54778378,-!p6@ZNF385A!1.61!40.18!ZNF385A;;chr3:12330560..12330579,+!p1@PPARG!1.60!44.74!PPARG;;chr12:72056749..72056767,+!p6@THAP2!1.60!43.00!THAP2;;chr7:50344289..50344323,+!p1@IKZF1!1.60!38.66!IKZF1;;chr10:35484804..35484902,+!p2@CREM!1.59!140.52!CREM;;chr11:65430535..65430549,-!p4@RELA!1.59!44.09!RELA;;chr19:45251395..45251432,+!p8@BCL3!1.59!37.79!BCL3;;chr14:75988771..75988826,+!p1@BATF!1.56!46.70!BATF;;chr9:102584159..102584174,+!p2@NR4A3!1.55!60.81!NR4A3;;chr19:50432132..50432217,+!p2@ATF5!1.55!41.27!ATF5;;chrX:153305787..153305807,-!p3@MECP2!1.55!34.10!MECP2;;chr4:106068026..106068084,+!p1@TET2!1.51!273.22!TET2;;chr13:41593425..41593480,-!p1@ELF1!1.51!191.34!ELF1;;chr12:72056773..72056796,+!p3@THAP2!1.51!40.40!THAP2;;chr21:34398234..34398250,+!p1@OLIG2!1.51!31.06!OLIG2;;chr10:51572408..51572454,+!p3@NCOA4!1.49!168.76!NCOA4;;chr2:145275162..145275202,-!p2@ZEB2!1.49!168.32!ZEB2;;chr16:79634624..79634642,-!p1@MAF!1.49!114.24!MAF;;chr6:126240380..126240430,+!p2@NCOA7!1.49!75.36!NCOA7;;chr17:38497662..38497713,+!p4@RARA!1.48!33.66!RARA;;chr3:187463179..187463201,-!p2@BCL6!1.47!113.81!BCL6;;chr9:110252035..110252057,-!p1@KLF4!1.46!428.30!KLF4;;chr6:15246200..15246214,+!p2@JARID2!1.46!75.36!JARID2;;chr11:47400045..47400060,-!p6@SPI1!1.46!27.80!SPI1;;chr6:106535598..106535637,+!p7@PRDM1!1.45!27.15!PRDM1;;chr12:52445218..52445237,+!p1@NR4A1!1.44!322.31!NR4A1;;chr12:48298765..48298783,-!p2@VDR!1.44!53.86!VDR;;chr21:36260343..36260402,-!p6@RUNX1!1.44!41.70!RUNX1;;chr14:35872453..35872485,-!p2@NFKBIA!1.43!63.20!NFKBIA;;chr6:144385698..144385742,-!p2@PLAGL1!1.43!31.49!PLAGL1;;chr6:391743..391759,+!p1@IRF4!1.43!26.06!IRF4;;chr8:53373491..53373506,-!p4@ST18!1.39!23.67!ST18;;chr20:48599506..48599526,+!p1@SNAI1!1.38!144.43!SNAI1;;chr12:11802753..11802834,+!p2@ETV6!1.38!110.77!ETV6;;chr22:38598057..38598071,+!p3@MAFF!1.38!52.99!MAFF;;chr13:41635029..41635044,-!p4@ELF1!1.38!47.78!ELF1;;chr11:47399920..47399931,-!p7@SPI1!1.38!23.24!SPI1;;chr14:75745523..75745537,+!p1@FOS!1.37!2604.96!FOS;;chr20:48807351..48807384,+!p1@CEBPB!1.37!2176.23!CEBPB;;chr2:61108695..61108753,+!p1@REL!1.37!151.38!REL;;chr18:3449720..3449749,+!p2@TGIF1!1.37!46.70!TGIF1;;chr6:126240463..126240489,+!p6@NCOA7!1.37!24.98!NCOA7;;chr9:129567282..129567353,+!p1@ZBTB43!1.35!274.09!ZBTB43;;chr3:39195037..39195069,-!p2@CSRNP1!1.35!129.66!CSRNP1;;chr2:191885737..191885750,-!p4@STAT1!1.35!21.28!STAT1;;chrX:129244454..129244488,-!p1@ELF4!1.33!143.78!ELF4;;chr11:615570..615721,-!p2@IRF7!1.33!39.75!IRF7;;chr19:36391434..36391450,-!p1@NFKBID!1.33!39.31!NFKBID;;chr1:161736038..161736056,+!p4@ATF6!1.32!46.04!ATF6;;chr3:39195139..39195150,-!p3@CSRNP1!1.32!25.19!CSRNP1;;chr2:231090433..231090469,+!p1@SP140!1.32!19.98!SP140;;chr9:102584128..102584144,+!p3@NR4A3!1.31!36.49!NR4A3;;chr5:142782823..142782854,-!p3@NR3C1!1.31!27.58!NR3C1;;chr4:83822199..83822239,+!p2@THAP9!1.31!23.24!THAP9;;chr21:36260325..36260341,-!p14@RUNX1!1.31!19.33!RUNX1;;chr22:38598086..38598105,+!p1@MAFF!1.30!195.69!MAFF;;chr10:51572339..51572376,+!p4@NCOA4!1.30!41.92!NCOA4;;chr6:126240442..126240459,+!p4@NCOA7!1.30!24.11!NCOA7;;chr8:116681123..116681143,-!p4@TRPS1!1.29!35.84!TRPS1;;chr2:231280954..231280965,+!p2@SP100!1.29!33.45!SP100;;chr1:221052776..221052799,+!p1@HLX!1.29!32.80!HLX;;chr2:28618532..28618610,+!p4@FOSL2!1.29!31.49!FOSL2;;chr18:3449618..3449634,+!p13@TGIF1!1.29!23.02!TGIF1;;chr21:30672433..30672464,+!p6@BACH1!1.29!18.68!BACH1;;chr1:158979792..158979814,+!p2@IFI16!1.28!167.24!IFI16;;chr10:104155480..104155534,+!p2@NFKB2!1.28!114.68!NFKB2;;chr14:35872962..35873025,-!p3@NFKBIA!1.28!45.39!NFKBIA;;chr2:70314240..70314256,+!p4@PCBP1!1.28!37.14!PCBP1;;chr8:116681150..116681164,-!p5@TRPS1!1.28!34.97!TRPS1;;chr19:54041669..54041697,+!p2@ZNF331!1.28!18.24!ZNF331;;chr9:102584262..102584276,+!p1@NR4A3!1.27!38.66!NR4A3;;chr1:212738742..212738755,+!p2@ATF3!1.27!17.81!ATF3;;chr4:106066712..106066728,+!p8@TET2!1.27!17.81!TET2;;chr3:126191157..126191171,-!p4@ZXDC!1.27!17.59!ZXDC;;chr16:79634595..79634620,-!p2@MAF!1.26!30.84!MAF;;chr12:57914700..57914737,+!p7@MBD6!1.26!17.38!MBD6;;chr2:145271342..145271377,-!p5@ZEB2!1.26!17.38!ZEB2;;chr10:31288329..31288353,-!p7@ZNF438!1.26!17.16!ZNF438;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.25!16.72!ZBED1;;chr11:65430038..65430053,-!p12@RELA!1.24!16.29!RELA;;chr3:150126101..150126118,+!p6@TSC22D2!1.23!26.06!TSC22D2;;chr18:3449586..3449617,+!p8@TGIF1!1.23!25.63!TGIF1;;chr4:185395590..185395627,-!p3@IRF2!1.23!19.76!IRF2;;chr14:35873947..35873965,-!p1@NFKBIA!1.22!954.76!NFKBIA;;chr10:35416142..35416169,+!p3@CREM!1.22!41.05!CREM;;chr18:3448455..3448480,+!p5@TGIF1!1.22!28.45!TGIF1;;chr2:231084659..231084721,-!p1@SP110!1.21!348.81!SP110;;chr1:158979851..158979865,+!p5@IFI16!1.21!33.23!IFI16;;chr2:145277882..145277967,-!p3@ZEB2!1.21!26.06!ZEB2;;chr17:38497715..38497734,+!p8@RARA!1.21!15.20!RARA;;chr19:45250948..45250998,+!p3@BCL3!1.20!37.14!BCL3;;chr4:83822294..83822306,+!p8@THAP9!1.19!14.55!THAP9;;chr1:158979922..158979933,+!p13@IFI16!1.19!14.33!IFI16;;chr1:25256439..25256476,-!p3@RUNX3!1.19!14.33!RUNX3;;chr4:103422499..103422632,+!p1@NFKB1!1.18!292.34!NFKB1;;chr6:44233252..44233296,-!p1@NFKBIE!1.18!138.35!NFKBIE;;chr19:47616992..47617011,-!p4@ZC3H4!1.17!29.10!ZC3H4;;chr20:48807456..48807475,+!p3@CEBPB!1.17!26.71!CEBPB;;chr21:30672734..30672748,+!p11@BACH1!1.17!13.90!BACH1;;chr2:238600998..238601013,+!p5@LRRFIP1!1.17!13.68!LRRFIP1;;chrX:129244430..129244442,-!p5@ELF4!1.17!13.68!ELF4;;chr8:116681194..116681214,-!p1@TRPS1!1.16!125.54!TRPS1;;chr7:28725740..28725778,+!p1@CREB5!1.16!120.32!CREB5;;chr16:89787973..89788001,+!p3@ZNF276!1.16!26.06!ZNF276;;chr8:81397846..81397860,+!p3@ZBTB10!1.16!16.72!ZBTB10;;chr2:28615716..28615733,+!p1@FOSL2!1.15!617.47!FOSL2;;chr3:39195075..39195088,-!p1@CSRNP1!1.15!82.10!CSRNP1;;chr10:104154246..104154347,+!p3@NFKB2!1.15!79.93!NFKB2;;chr12:48298785..48298828,-!p1@VDR!1.15!68.85!VDR;;chr2:231084820..231084836,-!p5@SP110!1.15!14.99!SP110;;chr11:65429891..65429915,-!p7@RELA!1.15!13.03!RELA;;chr3:170075436..170075520,+!p1@SKIL!1.14!272.14!SKIL;;chr4:185395633..185395651,-!p2@IRF2!1.14!20.42!IRF2;;chr4:106066730..106066754,+!p6@TET2!1.14!12.81!TET2;;chr14:24630465..24630531,+!p1@IRF9!1.13!478.25!IRF9;;chr21:36260980..36261011,-!p1@RUNX1!1.13!353.37!RUNX1;;chr7:17338266..17338282,+!p1@AHR!1.13!134.01!AHR;;chr9:110250697..110250738,-!p2@KLF4!1.13!14.55!KLF4;;chr13:41593392..41593403,-!p7@ELF1!1.13!12.38!ELF1;;chr2:157199008..157199023,-!p3@NR4A2!1.12!25.85!NR4A2;;chr5:88178983..88179012,-!p1@MEF2C!1.11!92.74!MEF2C;;chr16:3285119..3285133,-!p2@ZNF200!1.11!24.11!ZNF200;;chr2:61108808..61108821,+!p3@REL!1.11!14.99!REL;;chr5:71803177..71803255,-!p1@ZNF366!1.11!11.95!ZNF366;;chr10:3827371..3827386,-!p2@KLF6!1.10!98.17!KLF6;;chr8:116681409..116681431,-!p2@TRPS1!1.10!31.71!TRPS1;;chr8:71316428..71316459,-!p2@NCOA2!1.10!19.76!NCOA2;;chr20:48807615..48807644,+!p6@CEBPB!1.10!19.55!CEBPB;;chr2:145275228..145275241,-!p11@ZEB2!1.10!14.12!ZEB2;;chr4:83822246..83822277,+!p5@THAP9!1.10!11.51!THAP9;;chr19:54058073..54058088,+!p1@ZNF331!1.10!11.51!ZNF331;;chr18:3449527..3449582,+!p6@TGIF1!1.09!21.72!TGIF1;;chr19:19496539..19496576,+!p8@GATAD2A!1.09!19.76!GATAD2A;;chr6:15246261..15246312,+!p1@JARID2!1.08!267.36!JARID2;;chr9:88969339..88969422,-!p2@ZCCHC6!1.08!86.22!ZCCHC6;;chr7:115670792..115670797,-!p2@TFEC!1.08!11.08!TFEC;;chr9:88969303..88969335,-!p1@ZCCHC6!1.07!100.78!ZCCHC6;;chr16:3285144..3285191,-!p1@ZNF200!1.07!52.78!ZNF200;;chr2:185463247..185463263,+!p1@ZNF804A!1.07!19.11!ZNF804A;;chr14:35872494..35872511,-!p5@NFKBIA!1.07!14.33!NFKBIA;;chr8:81397876..81397898,+!p5@ZBTB10!1.07!12.60!ZBTB10;;chr1:158985553..158985574,+!p14@IFI16!1.07!10.64!IFI16;;chrX:153305741..153305753,-!p4@MECP2!1.07!10.64!MECP2;;chr1:157108130..157108173,-!p1@ETV3!1.06!76.45!ETV3;;chr19:45252008..45252024,+!p2@BCL3!1.06!34.53!BCL3;;chr8:72756063..72756125,-!p1@MSC!1.06!21.50!MSC;;chr4:87857474..87857489,+!p7@AFF1!1.06!18.24!AFF1;;chr8:81397820..81397836,+!p2@ZBTB10!1.06!13.03!ZBTB10;;chr7:150946376..150946389,-!p6@SMARCD3!1.06!10.43!SMARCD3;;chr10:98591637..98591643,+!p8@LCOR!1.06!10.43!LCOR;;chr3:193853927..193853944,+!p1@HES1!1.05!336.64!HES1;;chr18:3449695..3449712,+!p9@TGIF1!1.05!15.64!TGIF1;;chr5:131831436..131831450,-!p5@IRF1!1.05!10.21!IRF1;;chr1:37940170..37940190,+!p1@ZC3H12A!1.04!124.45!ZC3H12A;;chr12:96588219..96588263,+!p2@ELK3!1.04!72.76!ELK3;;chr2:238600933..238600985,+!p3@LRRFIP1!1.04!54.51!LRRFIP1;;chr21:36260463..36260480,-!p9@RUNX1!1.04!13.47!RUNX1;;chr3:107318229..107318239,+!p17@BBX!1.04!9.99!BBX;;chr3:187455529..187455544,-!p5@BCL6!1.04!9.99!BCL6;;chr4:106066776..106066791,+!p9@TET2!1.04!9.99!TET2;;chr10:64576035..64576046,-!p2@EGR2!1.04!9.99!EGR2;;chr12:56415246..56415286,+!p2@IKZF4!1.03!9.77!IKZF4;;chr12:57914286..57914304,-!p1@DDIT3!1.02!345.98!DDIT3;;chr17:38474489..38474548,+!p1@RARA!1.02!305.80!RARA;;chr6:106546808..106546833,+!p3@PRDM1!1.02!11.95!PRDM1;;chr12:56753869..56753930,-!p1@STAT2!1.01!414.83!STAT2;;chr6:12012170..12012245,+!p1@HIVEP1!1.01!46.91!HIVEP1;;chr2:208031943..208031978,-!p5@KLF7!1.01!12.60!KLF7;;chr3:187455486..187455504,-!p6@BCL6!1.01!9.34!BCL6;;chr3:187455680..187455700,-!p4@BCL6!1.01!9.34!BCL6;;chr1:221054922..221054933,+!p16@HLX!1.01!9.12!HLX;;chr2:208394817..208394834,+!p3@CREB1!1.00!37.36!CREB1;;chr18:72922743..72922761,+!p3@TSHZ1!1.00!29.97!TSHZ1;;chr6:15246217..15246228,+!p3@JARID2!1.00!16.29!JARID2;;chr7:106809470..106809481,+!p2@HBP1!1.00!12.60!HBP1;;chr6:106535687..106535706,+!p8@PRDM1!1.00!8.90!PRDM1;;chr7:50343634..50343717,+!p2@IKZF1!1.00!8.90!IKZF1;;chr8:53373515..53373526,-!p8@ST18!1.00!8.90!ST18;;chr3:187455634..187455651,-!p7@BCL6!1.00!8.90!BCL6;;chr19:45257891..45257908,+!p17@BCL3!1.00!8.90!BCL3;;chr1:221054853..221054873,+!p9@HLX!1.00!8.90!HLX;;chr9:4300050..4300118,-!p1@GLIS3!0.99!58.86!GLIS3;;chr18:3449821..3449860,+!p7@TGIF1!0.99!16.07!TGIF1;;chr15:85291372..85291405,+!p3@ZNF592!0.99!12.16!ZNF592;;chr2:192015701..192015743,-!p1@STAT4!0.99!12.16!STAT4;;chr3:187454281..187454300,-!p8@BCL6!0.99!8.69!BCL6;;chr5:172483414..172483425,+!p3@C5orf41!0.99!8.69!CREBRF;;chr20:47894569..47894799,-!p1@ZNFX1!0.98!233.04!ZNFX1;;chr10:104155455..104155479,+!p1@NFKB2!0.98!129.23!NFKB2;;chr20:48807648..48807671,+!p9@CEBPB!0.98!12.60!CEBPB;;chr4:83821967..83821998,+!p3@THAP9!0.98!10.43!THAP9;;chr4:103423079..103423112,+!p4@NFKB1!0.98!8.47!NFKB1;;chr19:12902289..12902307,+!p1@JUNB!0.97!1974.25!JUNB;;chr17:79885537..79885554,-!p2@MAFG!0.97!16.51!MAFG;;chr9:3526360..3526421,-!p5@RFX3!0.97!15.64!RFX3;;chr19:13213662..13213686,-!p1@LYL1!0.97!12.60!LYL1;;chr3:107318157..107318172,+!p6@BBX!0.97!11.95!BBX;;chr4:83822343..83822355,+!p9@THAP9!0.97!8.25!THAP9;;chr19:36389729..36389751,-!p3@NFKBID!0.97!8.25!NFKBID;;chr1:158985723..158985746,+!p20@IFI16!0.97!8.25!IFI16;;chr11:65430617..65430624,-!p8@RELA!0.97!8.25!RELA;;chr2:70142189..70142223,+!p2@MXD1!0.96!59.29!MXD1;;chr6:35310395..35310410,+!p2@PPARD!0.96!32.36!PPARD;;chr17:38498594..38498661,+!p2@RARA!0.96!27.80!RARA;;chr21:40177845..40177863,+!p1@ETS2!0.95!484.11!ETS2;;chr1:158979686..158979745,+!p1@IFI16!0.95!271.05!IFI16;;chr4:140098339..140098392,-!p1@ELF2!0.95!68.20!ELF2;;chr21:40177892..40177903,+!p2@ETS2!0.95!32.58!ETS2;;chr3:5020939..5020952,+!p2@BHLHE40!0.95!25.85!BHLHE40;;chr12:11802932..11802949,+!p3@ETV6!0.95!13.90!ETV6;;chr21:36421518..36421532,-!p11@RUNX1!0.95!7.82!RUNX1;;chr3:5021113..5021180,+!p1@BHLHE40!0.94!562.52!BHLHE40;;chr14:62162258..62162269,+!p2@HIF1A!0.94!76.45!HIF1A;;chr1:935467..935484,-!p1@HES4!0.94!35.18!HES4;;chr7:28725715..28725727,+!p3@CREB5!0.94!9.12!CREB5;;chr8:103667935..103667960,-!p1@KLF10!0.93!348.81!KLF10;;chr7:149470641..149470694,-!p1@ZNF467!0.93!34.97!ZNF467;;chr14:103059006..103059017,+!p2@RCOR1!0.93!12.16!RCOR1;;chr11:65430586..65430593,-!p5@RELA!0.93!8.47!RELA;;chr10:64575812..64575824,-!p4@EGR2!0.93!7.60!EGR2;;chr7:137620684..137620711,-!p4@CREB3L2!0.93!7.60!CREB3L2;;chr3:107318352..107318392,+!p14@BBX!0.93!7.60!BBX;;chr2:178129414..178129517,-!p1@NFE2L2!0.92!298.85!NFE2L2;;chr2:178129358..178129403,-!p5@NFE2L2!0.92!30.84!NFE2L2;;chr9:3525727..3525828,-!p2@RFX3!0.92!19.55!RFX3;;chr1:221053049..221053075,+!p3@HLX!0.92!13.03!HLX;;chr10:104155659..104155676,+!p4@NFKB2!0.92!9.34!NFKB2;;chr2:231280908..231280945,+!p1@SP100!0.91!285.60!SP100;;chr11:65667846..65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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000576;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000860;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
+|ffid_belonging_in_development=CL:0000049,CL:0000134,CL:0002057
 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 35: / Line 42: @@
 |fonse_treatment_closure=EFO:0000369,FF:0000625,FF:0000631,FF:0011444,FF:11882-125D1
 |has_quality=
+|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.nobarcode.bam
+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg19.nobarcode.rdna.fa.gz
+|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg38.nobarcode.bam
+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD14%252b%2520monocytes%2520-%2520treated%2520with%2520Trehalose%2520dimycolate%2520%2528TDM%2529%252c%2520donor3.CNhs13544.11882-125D1.hg38.nobarcode.ctss.bed.gz
 |id=FF:11882-125D1
-|is_a=EFO:0002091;;FF:0000002;;FF:0000210;;FF:0011444
+|is_a=EFO:0002091;;FF:0011444
+|is_obsolete=
+|library_id=CNhs13544
+|library_id_phase_based=2:CNhs13544
+|microRNAs=
+|microRNAs_nn=
+|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11882
+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11882
 |name=CD14+ monocytes - treated with Trehalose dimycolate (TDM), donor3
 |namespace=
@@ Line 42: / Line 61: @@
 |profile_cagescan=,,,
 |profile_hcage=CNhs13544,LSID1029,release012,COMPLETED
-|profile_rnaseq=,,,
+|profile_rnaseq=
 |profile_srnaseq=,,,
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 |rna_box=125
 |rna_catalog_number=
@@ Line 57: / Line 79: @@
 |rna_weight_ug=1.949445
 |sample_age=21
+|sample_category=primary cells
 |sample_cell_catalog=
 |sample_cell_line=
@@ Line 69: / Line 92: @@
 |sample_ethnicity=
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part;1.36305791074685e-47!GO:0019538;protein metabolic process;3.66938355777378e-47!GO:0044267;cellular protein metabolic process;5.21715593633298e-45!GO:0044260;cellular macromolecule metabolic process;8.31369904235027e-45!GO:0033036;macromolecule localization;6.15760199681187e-42!GO:0006412;translation;6.34453886268804e-41!GO:0015031;protein transport;7.06006946592222e-41!GO:0045184;establishment of protein localization;1.15419195946663e-40!GO:0043233;organelle lumen;3.40603382369531e-39!GO:0031974;membrane-enclosed lumen;3.40603382369531e-39!GO:0008104;protein localization;4.44904162340301e-39!GO:0043283;biopolymer metabolic process;5.79956975474853e-38!GO:0010467;gene expression;3.24643002925026e-36!GO:0005829;cytosol;1.08570058413529e-35!GO:0031090;organelle membrane;3.36574691854497e-32!GO:0006396;RNA processing;4.86579397840408e-32!GO:0016071;mRNA metabolic process;1.02340487439609e-31!GO:0006915;apoptosis;1.80222158842971e-31!GO:0012501;programmed cell death;2.36428434964601e-31!GO:0031981;nuclear lumen;6.24646783816921e-30!GO:0008219;cell death;6.61341912204259e-30!GO:0016265;death;6.61341912204259e-30!GO:0009059;macromolecule biosynthetic process;1.14634717074964e-29!GO:0044249;cellular biosynthetic process;3.29433772898062e-29!GO:0043234;protein complex;5.21428039190469e-29!GO:0005739;mitochondrion;1.20540109483911e-28!GO:0008380;RNA splicing;1.98893452366063e-28!GO:0009058;biosynthetic process;2.14954529813537e-28!GO:0005840;ribosome;1.26661112899409e-27!GO:0006397;mRNA processing;1.83273803940127e-27!GO:0046907;intracellular transport;3.00597472913651e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.4832966370987e-27!GO:0006886;intracellular protein transport;5.0017647341465e-27!GO:0031967;organelle envelope;5.76127770248717e-26!GO:0003735;structural constituent of ribosome;1.04905312288522e-25!GO:0031975;envelope;1.10751930213631e-25!GO:0016043;cellular component organization and biogenesis;4.86021632520131e-25!GO:0033279;ribosomal subunit;2.47947938455955e-24!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.17236533080575e-24!GO:0044445;cytosolic part;2.96816818009434e-22!GO:0005681;spliceosome;1.24414506110339e-21!GO:0044429;mitochondrial part;2.47071523412657e-21!GO:0051649;establishment of cellular localization;3.04827772016134e-21!GO:0042981;regulation of apoptosis;4.14037400609458e-21!GO:0005654;nucleoplasm;7.5183572958563e-21!GO:0043067;regulation of programmed cell death;1.08594829901912e-20!GO:0000166;nucleotide binding;1.37288410070587e-20!GO:0051641;cellular localization;1.58786113213652e-20!GO:0065003;macromolecular complex assembly;1.86248689771741e-19!GO:0008134;transcription factor binding;2.91929566065806e-19!GO:0006512;ubiquitin cycle;4.25775114135751e-19!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.9917181990406e-18!GO:0003676;nucleic acid binding;1.52964501461159e-17!GO:0044265;cellular macromolecule catabolic process;1.53227773885638e-17!GO:0006119;oxidative phosphorylation;1.86952704460171e-17!GO:0016192;vesicle-mediated transport;3.84859896370179e-17!GO:0044451;nucleoplasm part;4.03584195214327e-17!GO:0007243;protein kinase cascade;6.47759028661108e-17!GO:0002376;immune system process;7.90664146501715e-17!GO:0016070;RNA metabolic process;8.76577444037781e-17!GO:0043412;biopolymer modification;2.31655060568603e-16!GO:0048523;negative regulation of cellular process;2.35423253114021e-16!GO:0005740;mitochondrial envelope;2.63080892924917e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;6.07494524385298e-16!GO:0022607;cellular component assembly;6.12921028300774e-16!GO:0016462;pyrophosphatase activity;6.34544064330827e-16!GO:0017111;nucleoside-triphosphatase activity;7.71438432313582e-16!GO:0043285;biopolymer catabolic process;8.04882677907096e-16!GO:0022618;protein-RNA complex assembly;8.30175185967132e-16!GO:0016817;hydrolase activity, acting on acid anhydrides;8.30175185967132e-16!GO:0031966;mitochondrial membrane;9.4924296897203e-16!GO:0050794;regulation of cellular process;1.06953336589124e-15!GO:0048770;pigment granule;1.13329889394597e-15!GO:0042470;melanosome;1.13329889394597e-15!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.82307288701692e-15!GO:0019866;organelle inner membrane;2.65427326451754e-15!GO:0006464;protein modification process;3.08693424755357e-15!GO:0032553;ribonucleotide binding;4.983889640791e-15!GO:0032555;purine ribonucleotide binding;4.983889640791e-15!GO:0019941;modification-dependent protein catabolic process;6.02197434495305e-15!GO:0043632;modification-dependent macromolecule catabolic process;6.02197434495305e-15!GO:0051603;proteolysis involved in cellular protein catabolic process;7.42457913616452e-15!GO:0043687;post-translational protein modification;7.50586589555199e-15!GO:0044257;cellular protein catabolic process;7.74740233718482e-15!GO:0009057;macromolecule catabolic process;9.34133414284384e-15!GO:0006511;ubiquitin-dependent protein catabolic process;1.25323355221451e-14!GO:0005773;vacuole;1.5725272296197e-14!GO:0048519;negative regulation of biological process;1.70904837581207e-14!GO:0017076;purine nucleotide binding;1.93402931632085e-14!GO:0006955;immune response;3.04633489999069e-14!GO:0007242;intracellular signaling cascade;7.47269311076491e-14!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;8.55877567254951e-14!GO:0016874;ligase activity;9.6806042743173e-14!GO:0006605;protein targeting;1.03851251235286e-13!GO:0044248;cellular catabolic process;2.64562696061557e-13!GO:0000502;proteasome complex (sensu Eukaryota);4.1111048244914e-13!GO:0015934;large ribosomal subunit;4.86779748153047e-13!GO:0043069;negative regulation of programmed cell death;4.9117062055368e-13!GO:0043066;negative regulation of apoptosis;5.45041969430599e-13!GO:0030163;protein catabolic process;5.64430600699283e-13!GO:0000323;lytic vacuole;5.88618302520102e-13!GO:0005764;lysosome;5.88618302520102e-13!GO:0016604;nuclear body;8.07615513585873e-13!GO:0005743;mitochondrial inner membrane;1.10905740753274e-12!GO:0050789;regulation of biological process;1.13566485341105e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.46502114684059e-12!GO:0006950;response to stress;2.69930430265109e-12!GO:0006457;protein folding;2.74205356732296e-12!GO:0006913;nucleocytoplasmic transport;3.122553047258e-12!GO:0015935;small ribosomal subunit;3.13794155181372e-12!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);4.30581301240491e-12!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.50805534397336e-12!GO:0044455;mitochondrial membrane part;4.68356469479238e-12!GO:0051169;nuclear transport;5.71633790043737e-12!GO:0008135;translation factor activity, nucleic acid binding;5.83088619680641e-12!GO:0006996;organelle organization and biogenesis;7.07605321011277e-12!GO:0003712;transcription cofactor activity;7.85742150262128e-12!GO:0009615;response to virus;8.33622317502663e-12!GO:0005768;endosome;1.02014487451924e-11!GO:0012505;endomembrane system;1.21736426825322e-11!GO:0006366;transcription from RNA polymerase II promoter;1.33588717846479e-11!GO:0006793;phosphorus metabolic process;1.47637964222874e-11!GO:0006796;phosphate metabolic process;1.47637964222874e-11!GO:0051246;regulation of protein metabolic process;1.60253537006881e-11!GO:0016607;nuclear speck;1.91485384287961e-11!GO:0006259;DNA metabolic process;3.10107698722614e-11!GO:0006413;translational initiation;3.99321526936149e-11!GO:0065009;regulation of a molecular function;4.51897397986236e-11!GO:0003743;translation initiation factor activity;4.78914012825765e-11!GO:0065007;biological regulation;7.87670224725524e-11!GO:0006916;anti-apoptosis;8.56966398508959e-11!GO:0005794;Golgi apparatus;1.01194427769504e-10!GO:0016310;phosphorylation;1.32158364190572e-10!GO:0006446;regulation of translational initiation;1.85456198727042e-10!GO:0005524;ATP binding;3.14297133901975e-10!GO:0051186;cofactor metabolic process;4.80875913963518e-10!GO:0032559;adenyl ribonucleotide binding;4.80875913963518e-10!GO:0031324;negative regulation of cellular metabolic process;4.96108305845444e-10!GO:0051082;unfolded protein binding;7.89624398558921e-10!GO:0048522;positive regulation of cellular process;8.40249195991087e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;8.68790540933009e-10!GO:0005746;mitochondrial respiratory chain;9.89138544537606e-10!GO:0005730;nucleolus;9.98751127902251e-10!GO:0005635;nuclear envelope;1.2749034521556e-09!GO:0030554;adenyl nucleotide binding;1.77621553461301e-09!GO:0008639;small protein conjugating enzyme activity;1.78688692460049e-09!GO:0019787;small conjugating protein ligase activity;2.51414605833349e-09!GO:0004842;ubiquitin-protein ligase activity;2.57610255646202e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.12648958893653e-09!GO:0015986;ATP synthesis coupled proton transport;3.3918700597817e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.3918700597817e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;3.67240000492332e-09!GO:0000375;RNA splicing, via transesterification reactions;3.67240000492332e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.67240000492332e-09!GO:0009967;positive regulation of signal transduction;3.81052505754295e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;3.81052505754295e-09!GO:0006732;coenzyme metabolic process;4.15477627668438e-09!GO:0050136;NADH dehydrogenase (quinone) activity;4.65629244960873e-09!GO:0003954;NADH dehydrogenase activity;4.65629244960873e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.65629244960873e-09!GO:0048518;positive regulation of biological process;4.65802630591626e-09!GO:0016787;hydrolase activity;5.10786512889426e-09!GO:0043065;positive regulation of apoptosis;6.57251162470755e-09!GO:0005770;late endosome;7.61285283699615e-09!GO:0005783;endoplasmic reticulum;8.48739084562297e-09!GO:0009056;catabolic process;8.58610121869176e-09!GO:0019829;cation-transporting ATPase activity;9.24443871249623e-09!GO:0009607;response to biotic stimulus;9.75254864031829e-09!GO:0043068;positive regulation of programmed cell death;1.06872630619011e-08!GO:0006417;regulation of translation;1.17370103471831e-08!GO:0006163;purine nucleotide metabolic process;1.50616091504239e-08!GO:0009892;negative regulation of metabolic process;1.7144003566545e-08!GO:0006164;purine nucleotide biosynthetic process;1.99282606422653e-08!GO:0042623;ATPase activity, coupled;2.09610405510522e-08!GO:0017038;protein import;2.23568131189734e-08!GO:0009259;ribonucleotide metabolic process;2.37977773250898e-08!GO:0048193;Golgi vesicle transport;2.60072967151774e-08!GO:0009150;purine ribonucleotide metabolic process;2.62258404776596e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.84863461339345e-08!GO:0019222;regulation of metabolic process;3.1691263978614e-08!GO:0009152;purine ribonucleotide biosynthetic process;3.25506815673979e-08!GO:0007049;cell cycle;3.54874445177258e-08!GO:0005525;GTP binding;4.19359562375489e-08!GO:0016887;ATPase activity;4.58882943315344e-08!GO:0006754;ATP biosynthetic process;4.7079041393249e-08!GO:0006753;nucleoside phosphate metabolic process;4.7079041393249e-08!GO:0050790;regulation of catalytic activity;4.74042449954098e-08!GO:0042775;organelle ATP synthesis coupled electron transport;6.01718356334748e-08!GO:0042773;ATP synthesis coupled electron transport;6.01718356334748e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.02757449934337e-08!GO:0003924;GTPase activity;6.74356050457423e-08!GO:0009260;ribonucleotide biosynthetic process;6.90306575215263e-08!GO:0044453;nuclear membrane part;6.97633611089906e-08!GO:0016564;transcription repressor activity;7.90625105066911e-08!GO:0016881;acid-amino acid ligase activity;8.35748069202833e-08!GO:0009889;regulation of biosynthetic process;8.45490228689861e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.93453379563162e-08!GO:0007264;small GTPase mediated signal transduction;8.96543643804683e-08!GO:0051170;nuclear import;1.01504820589112e-07!GO:0031965;nuclear membrane;1.04147565572263e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.11299023444592e-07!GO:0045271;respiratory chain complex I;1.11299023444592e-07!GO:0005747;mitochondrial respiratory chain complex I;1.11299023444592e-07!GO:0008047;enzyme activator activity;1.20634956283642e-07!GO:0016481;negative regulation of transcription;1.33270889512018e-07!GO:0006917;induction of apoptosis;1.44484622270629e-07!GO:0005774;vacuolar membrane;1.49124997792217e-07!GO:0048468;cell development;1.65332962801035e-07!GO:0051726;regulation of cell cycle;1.73276516266471e-07!GO:0008565;protein transporter activity;1.74090943642479e-07!GO:0000074;regulation of progression through cell cycle;1.88762116278224e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.94131902010151e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.94131902010151e-07!GO:0046034;ATP metabolic process;2.03778836148109e-07!GO:0016469;proton-transporting two-sector ATPase complex;2.047146056526e-07!GO:0009966;regulation of signal transduction;2.07924956917094e-07!GO:0031326;regulation of cellular biosynthetic process;2.16339296319714e-07!GO:0006606;protein import into nucleus;2.23933253863543e-07!GO:0015078;hydrogen ion transmembrane transporter activity;2.23933253863543e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.25432278500622e-07!GO:0012502;induction of programmed cell death;2.36909714412647e-07!GO:0003713;transcription coactivator activity;2.52131542270412e-07!GO:0009142;nucleoside triphosphate biosynthetic process;2.67648386644631e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.67648386644631e-07!GO:0009055;electron carrier activity;3.75907080297686e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.22338387144418e-07!GO:0009144;purine nucleoside triphosphate metabolic process;4.22338387144418e-07!GO:0044440;endosomal part;4.85982851033018e-07!GO:0010008;endosome membrane;4.85982851033018e-07!GO:0009199;ribonucleoside triphosphate metabolic process;5.53344986945285e-07!GO:0006974;response to DNA damage stimulus;5.59463242301907e-07!GO:0051188;cofactor biosynthetic process;5.88352815892958e-07!GO:0050657;nucleic acid transport;6.63653733489739e-07!GO:0051236;establishment of RNA localization;6.63653733489739e-07!GO:0050658;RNA transport;6.63653733489739e-07!GO:0031980;mitochondrial lumen;7.13291666442563e-07!GO:0005759;mitochondrial matrix;7.13291666442563e-07!GO:0045786;negative regulation of progression through cell cycle;7.46132868909609e-07!GO:0044437;vacuolar part;7.60452276676126e-07!GO:0044432;endoplasmic reticulum part;8.47283563797193e-07!GO:0009108;coenzyme biosynthetic process;8.55677687827202e-07!GO:0006403;RNA localization;9.08067615461628e-07!GO:0005765;lysosomal membrane;9.29965914367709e-07!GO:0032561;guanyl ribonucleotide binding;1.11349589481702e-06!GO:0019001;guanyl nucleotide binding;1.11349589481702e-06!GO:0019899;enzyme binding;1.24609827680272e-06!GO:0006752;group transfer coenzyme metabolic process;1.30138886029932e-06!GO:0009141;nucleoside triphosphate metabolic process;1.46018749454761e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.50282651612741e-06!GO:0004386;helicase activity;1.73960046298388e-06!GO:0008026;ATP-dependent helicase activity;1.76424492196535e-06!GO:0005793;ER-Golgi intermediate compartment;1.82527138383286e-06!GO:0005643;nuclear pore;1.82584343713077e-06!GO:0043228;non-membrane-bound organelle;2.32797253767336e-06!GO:0043232;intracellular non-membrane-bound organelle;2.32797253767336e-06!GO:0031323;regulation of cellular metabolic process;3.7238559283006e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.16856501945411e-06!GO:0032446;protein modification by small protein conjugation;4.68750237074781e-06!GO:0016568;chromatin modification;5.36520889778086e-06!GO:0004298;threonine endopeptidase activity;5.44814247492206e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.52135506422676e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;6.20968364208219e-06!GO:0016567;protein ubiquitination;7.36933706413066e-06!GO:0030695;GTPase regulator activity;7.84173255845719e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;9.07839381579256e-06!GO:0051028;mRNA transport;9.23155584268474e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.36517945040521e-06!GO:0016563;transcription activator activity;9.64225844505298e-06!GO:0006281;DNA repair;9.6571330057616e-06!GO:0016044;membrane organization and biogenesis;1.00960344984283e-05!GO:0005789;endoplasmic reticulum membrane;1.00960344984283e-05!GO:0031982;vesicle;1.52837404444407e-05!GO:0006461;protein complex assembly;1.53748123610518e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.54107264697446e-05!GO:0015399;primary active transmembrane transporter activity;1.54107264697446e-05!GO:0006954;inflammatory response;1.55261970278819e-05!GO:0006323;DNA packaging;1.93836202795227e-05!GO:0031902;late endosome membrane;1.94889750619444e-05!GO:0022402;cell cycle process;2.03894368333218e-05!GO:0003714;transcription corepressor activity;2.08899305260766e-05!GO:0006888;ER to Golgi vesicle-mediated transport;2.11325986185652e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.20702484730604e-05!GO:0016197;endosome transport;2.27657437651459e-05!GO:0046930;pore complex;2.85621918953675e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.95655911815781e-05!GO:0048475;coated membrane;3.47384857203731e-05!GO:0030117;membrane coat;3.47384857203731e-05!GO:0030099;myeloid cell differentiation;3.52059190301215e-05!GO:0003724;RNA helicase activity;3.59886909580991e-05!GO:0065002;intracellular protein transport across a membrane;3.7186711906328e-05!GO:0005096;GTPase activator activity;3.99166509654369e-05!GO:0010468;regulation of gene expression;4.88717365594865e-05!GO:0043566;structure-specific DNA binding;4.89357783583846e-05!GO:0051336;regulation of hydrolase activity;4.97663140984806e-05!GO:0008234;cysteine-type peptidase activity;5.05105270898147e-05!GO:0031252;leading edge;5.17029697621728e-05!GO:0045259;proton-transporting ATP synthase complex;5.21695840723065e-05!GO:0006613;cotranslational protein targeting to membrane;5.81937438998882e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.30338882415413e-05!GO:0030532;small nuclear ribonucleoprotein complex;6.95432936394624e-05!GO:0051707;response to other organism;7.13496786012411e-05!GO:0005083;small GTPase regulator activity;7.61085266081969e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;7.64330713120092e-05!GO:0051789;response to protein stimulus;7.64892557206087e-05!GO:0006986;response to unfolded protein;7.64892557206087e-05!GO:0031410;cytoplasmic vesicle;8.83225397734915e-05!GO:0009060;aerobic respiration;9.83209546820299e-05!GO:0042254;ribosome biogenesis and assembly;9.83209546820299e-05!GO:0031988;membrane-bound vesicle;0.000110228178486418!GO:0001816;cytokine production;0.000115263392187545!GO:0008632;apoptotic program;0.000125773461121009!GO:0006401;RNA catabolic process;0.000128460910725402!GO:0030120;vesicle coat;0.00013580055188358!GO:0030662;coated vesicle membrane;0.00013580055188358!GO:0003697;single-stranded DNA binding;0.000147875626627214!GO:0051168;nuclear export;0.000162192084789074!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000204729024565858!GO:0006897;endocytosis;0.000204729024565858!GO:0010324;membrane invagination;0.000204729024565858!GO:0043492;ATPase activity, coupled to movement of substances;0.000207354323368769!GO:0045892;negative regulation of transcription, DNA-dependent;0.000213817353345486!GO:0006350;transcription;0.000226917503995931!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0002304169087943!GO:0005761;mitochondrial ribosome;0.000234207736910569!GO:0000313;organellar ribosome;0.000234207736910569!GO:0006818;hydrogen transport;0.000259440546180411!GO:0000245;spliceosome assembly;0.000266350137802433!GO:0051276;chromosome organization and biogenesis;0.000270836318535931!GO:0045333;cellular respiration;0.000285670330969266!GO:0051427;hormone receptor binding;0.000299006096579069!GO:0030097;hemopoiesis;0.000299088813817714!GO:0009719;response to endogenous stimulus;0.000299759725200463!GO:0005885;Arp2/3 protein complex;0.000300932845376888!GO:0007034;vacuolar transport;0.000301875251540036!GO:0022890;inorganic cation transmembrane transporter activity;0.000301875251540036!GO:0032940;secretion by cell;0.000309685802714438!GO:0008186;RNA-dependent ATPase activity;0.00032272066287446!GO:0016023;cytoplasmic membrane-bound vesicle;0.000331330611088533!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000335631382548683!GO:0006952;defense response;0.000343592792809807!GO:0004674;protein serine/threonine kinase activity;0.000355945293616432!GO:0015992;proton transport;0.000371656483467033!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000385206018819707!GO:0007041;lysosomal transport;0.000402145285118676!GO:0007050;cell cycle arrest;0.000402145285118676!GO:0005057;receptor signaling protein activity;0.000419145059254077!GO:0000151;ubiquitin ligase complex;0.000435336107443432!GO:0035257;nuclear hormone receptor binding;0.000447739277295114!GO:0009117;nucleotide metabolic process;0.000454842456305301!GO:0046822;regulation of nucleocytoplasmic transport;0.00046519926509367!GO:0005769;early endosome;0.000467858312594008!GO:0006402;mRNA catabolic process;0.000467858312594008!GO:0051338;regulation of transferase activity;0.000474069369400339!GO:0007005;mitochondrion organization and biogenesis;0.000483369066602266!GO:0005798;Golgi-associated vesicle;0.000483745753423207!GO:0007265;Ras protein signal transduction;0.000497496738767377!GO:0009893;positive regulation of metabolic process;0.000519358215541845!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000523842194033979!GO:0045321;leukocyte activation;0.000604977472169868!GO:0046519;sphingoid metabolic process;0.000617594153255512!GO:0016740;transferase activity;0.000633056905837375!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000671949588375929!GO:0008654;phospholipid biosynthetic process;0.000684001859764243!GO:0043549;regulation of kinase activity;0.000842763143491914!GO:0006399;tRNA metabolic process;0.000856090941503177!GO:0006612;protein targeting to membrane;0.00085688236170877!GO:0004004;ATP-dependent RNA helicase activity;0.000883911332334803!GO:0006672;ceramide metabolic process;0.000945042936986631!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000950267805433461!GO:0007040;lysosome organization and biogenesis;0.000970223394369913!GO:0005667;transcription factor complex;0.00101235672839451!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00101932527926554!GO:0004812;aminoacyl-tRNA ligase activity;0.00101932527926554!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00101932527926554!GO:0046983;protein dimerization activity;0.00110175457888512!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00110750409278363!GO:0045859;regulation of protein kinase activity;0.00110880666905553!GO:0016779;nucleotidyltransferase activity;0.00110880666905553!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00114704312439013!GO:0001726;ruffle;0.0011974530534537!GO:0007259;JAK-STAT cascade;0.00121609407016193!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00123343364609559!GO:0044431;Golgi apparatus part;0.00126990283393961!GO:0030149;sphingolipid catabolic process;0.00132100411873976!GO:0003729;mRNA binding;0.00141522439242674!GO:0043038;amino acid activation;0.00142422469882441!GO:0006418;tRNA aminoacylation for protein translation;0.00142422469882441!GO:0043039;tRNA aminoacylation;0.00142422469882441!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00147307709840152!GO:0065004;protein-DNA complex assembly;0.00150118238222828!GO:0043087;regulation of GTPase activity;0.00176788344781567!GO:0005637;nuclear inner membrane;0.0018448197303526!GO:0045893;positive regulation of transcription, DNA-dependent;0.00186180672471261!GO:0006352;transcription initiation;0.0018643551113195!GO:0006919;caspase activation;0.0019017134156271!GO:0051223;regulation of protein transport;0.00191126772821967!GO:0007033;vacuole organization and biogenesis;0.00191767140514432!GO:0005099;Ras GTPase activator activity;0.00198222627368297!GO:0016251;general RNA polymerase II transcription factor activity;0.00207595251363942!GO:0033116;ER-Golgi intermediate compartment membrane;0.00208677084513547!GO:0002521;leukocyte differentiation;0.00217449217258199!GO:0045941;positive regulation of transcription;0.00235907604879379!GO:0033157;regulation of intracellular protein transport;0.00245264933162836!GO:0042306;regulation of protein import into nucleus;0.00245264933162836!GO:0002757;immune response-activating signal transduction;0.00250004975781828!GO:0009611;response to wounding;0.00252977159030736!GO:0031072;heat shock protein binding;0.00256371605187939!GO:0018193;peptidyl-amino acid modification;0.00270268470248992!GO:0016072;rRNA metabolic process;0.00280842361476757!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00288867290587052!GO:0043281;regulation of caspase activity;0.00288867290587052!GO:0006099;tricarboxylic acid cycle;0.00288867290587052!GO:0046356;acetyl-CoA catabolic process;0.00288867290587052!GO:0044262;cellular carbohydrate metabolic process;0.00300784745978822!GO:0005741;mitochondrial outer membrane;0.00311122177078059!GO:0045637;regulation of myeloid cell differentiation;0.00312377207663759!GO:0051090;regulation of transcription factor activity;0.00312810272430719!GO:0002274;myeloid leukocyte activation;0.00320449496744759!GO:0006364;rRNA processing;0.00325370183898549!GO:0004197;cysteine-type endopeptidase activity;0.00349551056122109!GO:0043280;positive regulation of caspase activity;0.00351141325169051!GO:0009165;nucleotide biosynthetic process;0.00361083947514754!GO:0006643;membrane lipid metabolic process;0.00367062039928587!GO:0051187;cofactor catabolic process;0.00373923024788403!GO:0002252;immune effector process;0.00393846497992053!GO:0002520;immune system development;0.00400013080986572!GO:0043021;ribonucleoprotein binding;0.00404809597235342!GO:0031325;positive regulation of cellular metabolic process;0.00436169147630336!GO:0043085;positive regulation of catalytic activity;0.00444402285589645!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0045451857993841!GO:0043623;cellular protein complex assembly;0.00461685875458351!GO:0003702;RNA polymerase II transcription factor activity;0.00463713296816574!GO:0022415;viral reproductive process;0.00479034795185332!GO:0006351;transcription, DNA-dependent;0.0052049829724166!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00520515165045862!GO:0032774;RNA biosynthetic process;0.00534185286692365!GO:0002764;immune response-regulating signal transduction;0.00536262738051782!GO:0019221;cytokine and chemokine mediated signaling pathway;0.0053719691049666!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00549527143927128!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00549527143927128!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00549527143927128!GO:0048534;hemopoietic or lymphoid organ development;0.00576070170109186!GO:0060090;molecular adaptor activity;0.00584807051498152!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0059348177977901!GO:0016301;kinase activity;0.00595981722438203!GO:0045454;cell redox homeostasis;0.00615496452789253!GO:0006891;intra-Golgi vesicle-mediated transport;0.00618394419413898!GO:0006091;generation of precursor metabolites and energy;0.00623790965695632!GO:0019377;glycolipid catabolic process;0.00628395481367236!GO:0006084;acetyl-CoA metabolic process;0.00629949099586413!GO:0042990;regulation of transcription factor import into nucleus;0.00635355910682221!GO:0042991;transcription factor import into nucleus;0.00635355910682221!GO:0045045;secretory pathway;0.00657268346078239!GO:0005813;centrosome;0.00669804260548132!GO:0046966;thyroid hormone receptor binding;0.00720089742810413!GO:0006468;protein amino acid phosphorylation;0.00726520332043716!GO:0003725;double-stranded RNA binding;0.00738731123278036!GO:0016363;nuclear matrix;0.00741710968776301!GO:0030036;actin cytoskeleton organization and biogenesis;0.00743334258840411!GO:0046649;lymphocyte activation;0.00765206385625086!GO:0031901;early endosome membrane;0.00779466953744108!GO:0004185;serine carboxypeptidase activity;0.00786842919898125!GO:0006607;NLS-bearing substrate import into nucleus;0.00816311599903839!GO:0045449;regulation of transcription;0.00817253294325866!GO:0002250;adaptive immune response;0.00873387931420948!GO:0002460;adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains;0.00873387931420948!GO:0031968;organelle outer membrane;0.0089486234556809!GO:0009109;coenzyme catabolic process;0.00919096406067138!GO:0048487;beta-tubulin binding;0.00920443554705121!GO:0043433;negative regulation of transcription factor activity;0.00929605513897097!GO:0048471;perinuclear region of cytoplasm;0.00965461871601269!GO:0019867;outer membrane;0.0100157050702632!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0106193041254939!GO:0030693;caspase activity;0.0106193041254939!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0106193041254939!GO:0048500;signal recognition particle;0.0107465168103415!GO:0005484;SNAP receptor activity;0.0108750397201824!GO:0042110;T cell activation;0.0108947264599993!GO:0002504;antigen processing and presentation of peptide or polysaccharide antigen via MHC class II;0.0111551219438273!GO:0030218;erythrocyte differentiation;0.0114500339859718!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0114555355495769!GO:0001775;cell activation;0.0116998500463995!GO:0031625;ubiquitin protein ligase binding;0.0120090361240215!GO:0033367;protein localization in mast cell secretory granule;0.0120090361240215!GO:0033365;protein localization in organelle;0.0120090361240215!GO:0033371;T cell secretory granule organization and biogenesis;0.0120090361240215!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.0120090361240215!GO:0033375;protease localization in T cell secretory granule;0.0120090361240215!GO:0042629;mast cell granule;0.0120090361240215!GO:0033377;maintenance of protein localization in T cell secretory granule;0.0120090361240215!GO:0033364;mast cell secretory granule organization and biogenesis;0.0120090361240215!GO:0033380;granzyme B localization in T cell secretory granule;0.0120090361240215!GO:0033379;maintenance of protease localization in T cell secretory granule;0.0120090361240215!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.0120090361240215!GO:0033368;protease localization in mast cell secretory granule;0.0120090361240215!GO:0033366;protein localization in secretory granule;0.0120090361240215!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.0120090361240215!GO:0033374;protein localization in T cell secretory granule;0.0120090361240215!GO:0003690;double-stranded DNA binding;0.0125539725062512!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0125539725062512!GO:0000209;protein polyubiquitination;0.0125539725062512!GO:0006611;protein export from nucleus;0.0131693576081884!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0131926305256802!GO:0045047;protein targeting to ER;0.0131926305256802!GO:0032318;regulation of Ras GTPase activity;0.0132836764873409!GO:0002440;production of molecular mediator of immune response;0.0133353812349714!GO:0001817;regulation of cytokine production;0.0135879655250655!GO:0051098;regulation of binding;0.0137841812366863!GO:0046479;glycosphingolipid catabolic process;0.0149321898261851!GO:0032763;regulation of mast cell cytokine production;0.0149884568360289!GO:0032762;mast cell cytokine production;0.0149884568360289!GO:0006458;'de novo' protein folding;0.0150588910831139!GO:0051084;'de novo' posttranslational protein folding;0.0150588910831139!GO:0019882;antigen processing and presentation;0.015231729042684!GO:0000082;G1/S transition of mitotic cell cycle;0.0153502072582244!GO:0030867;rough endoplasmic reticulum membrane;0.0154855199915757!GO:0045792;negative regulation of cell size;0.0155102623788076!GO:0002467;germinal center formation;0.015584962076019!GO:0008383;manganese superoxide dismutase activity;0.0158333002716241!GO:0001315;age-dependent response to reactive oxygen species;0.0158333002716241!GO:0019883;antigen processing and presentation of endogenous antigen;0.0161721220234964!GO:0046466;membrane lipid catabolic process;0.0163214269158405!GO:0019079;viral genome replication;0.0167461008458471!GO:0006333;chromatin assembly or disassembly;0.0167461008458471!GO:0032386;regulation of intracellular transport;0.0167806703670723!GO:0048146;positive regulation of fibroblast proliferation;0.0170045488256098!GO:0000139;Golgi membrane;0.0173074172995782!GO:0000339;RNA cap binding;0.0185522346870854!GO:0019220;regulation of phosphate metabolic process;0.0189462176875275!GO:0051174;regulation of phosphorus metabolic process;0.0189462176875275!GO:0051345;positive regulation of hydrolase activity;0.0191345368207109!GO:0030308;negative regulation of cell growth;0.0191345368207109!GO:0033673;negative regulation of kinase activity;0.019238313250078!GO:0006469;negative regulation of protein kinase activity;0.019238313250078!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0194652708116943!GO:0005815;microtubule organizing center;0.0195852678907762!GO:0008312;7S RNA binding;0.0197807590882474!GO:0019318;hexose metabolic process;0.0199035857165477!GO:0030127;COPII vesicle coat;0.020309242314467!GO:0012507;ER to Golgi transport vesicle membrane;0.020309242314467!GO:0017091;AU-rich element binding;0.0205065014171349!GO:0050779;RNA destabilization;0.0205065014171349!GO:0000289;poly(A) tail shortening;0.0205065014171349!GO:0001819;positive regulation of cytokine production;0.0208845008868051!GO:0006665;sphingolipid metabolic process;0.0211406454660138!GO:0030521;androgen receptor signaling pathway;0.0211717324020502!GO:0046467;membrane lipid biosynthetic process;0.0213546695874021!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0213969118876973!GO:0008333;endosome to lysosome transport;0.0214230554957403!GO:0030176;integral to endoplasmic reticulum membrane;0.0214230554957403!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0214292041960401!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0214292041960401!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0214445686248086!GO:0002237;response to molecule of bacterial origin;0.0215315039109137!GO:0019904;protein domain specific binding;0.0216198749456107!GO:0051348;negative regulation of transferase activity;0.0222567314133699!GO:0030224;monocyte differentiation;0.0223150468883084!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0223364046839694!GO:0043022;ribosome binding;0.0223364046839694!GO:0006650;glycerophospholipid metabolic process;0.0224491141111998!GO:0048144;fibroblast proliferation;0.0225792550330741!GO:0048145;regulation of fibroblast proliferation;0.0225792550330741!GO:0002443;leukocyte mediated immunity;0.0225792550330741!GO:0030134;ER to Golgi transport vesicle;0.022760949927542!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0228265026450656!GO:0019210;kinase inhibitor activity;0.0228879738050176!GO:0006749;glutathione metabolic process;0.022930511672539!GO:0003727;single-stranded RNA binding;0.0233858798079358!GO:0002224;toll-like receptor signaling pathway;0.0234162881233972!GO:0002221;pattern recognition receptor signaling pathway;0.0234162881233972!GO:0051059;NF-kappaB binding;0.0234269117389463!GO:0030663;COPI coated vesicle membrane;0.0235001179326313!GO:0030126;COPI vesicle coat;0.0235001179326313!GO:0030041;actin filament polymerization;0.0238191149515874!GO:0005996;monosaccharide metabolic process;0.0239088999096844!GO:0019843;rRNA binding;0.0239088999096844!GO:0004860;protein kinase inhibitor activity;0.0242055262070952!GO:0030133;transport vesicle;0.0244068516942149!GO:0000278;mitotic cell cycle;0.0244923683776004!GO:0019783;small conjugating protein-specific protease activity;0.0245144511855825!GO:0048002;antigen processing and presentation of peptide antigen;0.024578449061709!GO:0050811;GABA receptor binding;0.0246380473103246!GO:0006414;translational elongation;0.0250700198621306!GO:0051252;regulation of RNA metabolic process;0.0255194375542888!GO:0030518;steroid hormone receptor signaling pathway;0.0257173029710723!GO:0043300;regulation of leukocyte degranulation;0.0258840535942765!GO:0030118;clathrin coat;0.0258977691893305!GO:0030384;phosphoinositide metabolic process;0.0262381834181207!GO:0015036;disulfide oxidoreductase activity;0.0264494109371493!GO:0000785;chromatin;0.0268550943353216!GO:0030503;regulation of cell redox homeostasis;0.0268550943353216!GO:0006260;DNA replication;0.0269205891426805!GO:0030658;transport vesicle membrane;0.0283380916933197!GO:0046979;TAP2 binding;0.0283839899551404!GO:0046977;TAP binding;0.0283839899551404!GO:0046978;TAP1 binding;0.0283839899551404!GO:0005152;interleukin-1 receptor antagonist activity;0.0288659823226992!GO:0030353;fibroblast growth factor receptor antagonist activity;0.0288659823226992!GO:0008139;nuclear localization sequence binding;0.0289525954156108!GO:0042802;identical protein binding;0.0298943920996233!GO:0030137;COPI-coated vesicle;0.029896131811872!GO:0015923;mannosidase activity;0.0300124494356393!GO:0006007;glucose catabolic process;0.0303298909782779!GO:0051092;activation of NF-kappaB transcription factor;0.0306116225760308!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0306777957238357!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.0306953399155968!GO:0002819;regulation of adaptive immune response;0.0306953399155968!GO:0004843;ubiquitin-specific protease activity;0.0307124995636399!GO:0005048;signal sequence binding;0.0308197306018351!GO:0008629;induction of apoptosis by intracellular signals;0.0308350920399785!GO:0043621;protein self-association;0.0312123174188705!GO:0030029;actin filament-based process;0.0312174577159868!GO:0051056;regulation of small GTPase mediated signal transduction;0.0314620547970967!GO:0005669;transcription factor TFIID complex;0.0314813727968698!GO:0008637;apoptotic mitochondrial changes;0.031582983902326!GO:0002682;regulation of immune system process;0.0316859609404995!GO:0006405;RNA export from nucleus;0.0316859609404995!GO:0051329;interphase of mitotic cell cycle;0.0317374791396984!GO:0045639;positive regulation of myeloid cell differentiation;0.031778187696193!GO:0004177;aminopeptidase activity;0.0332408517460084!GO:0008361;regulation of cell size;0.0334943609876052!GO:0002684;positive regulation of immune system process;0.0336189166612666!GO:0042613;MHC class II protein complex;0.0336189166612666!GO:0051247;positive regulation of protein metabolic process;0.0339956363402465!GO:0000287;magnesium ion binding;0.0341663364694421!GO:0046578;regulation of Ras protein signal transduction;0.0341737976405758!GO:0008538;proteasome activator activity;0.0343041004789418!GO:0033033;negative regulation of myeloid cell apoptosis;0.0343214771544498!GO:0001803;regulation of type III hypersensitivity;0.0343214771544498!GO:0032733;positive regulation of interleukin-10 production;0.0343214771544498!GO:0033025;regulation of mast cell apoptosis;0.0343214771544498!GO:0001805;positive regulation of type III hypersensitivity;0.0343214771544498!GO:0033023;mast cell homeostasis;0.0343214771544498!GO:0002431;Fc receptor mediated stimulatory signaling pathway;0.0343214771544498!GO:0033032;regulation of myeloid cell apoptosis;0.0343214771544498!GO:0001802;type III hypersensitivity;0.0343214771544498!GO:0033028;myeloid cell apoptosis;0.0343214771544498!GO:0042590;antigen processing and presentation of exogenous peptide antigen via MHC class I;0.0343214771544498!GO:0033026;negative regulation of mast cell apoptosis;0.0343214771544498!GO:0033024;mast cell apoptosis;0.0343214771544498!GO:0032760;positive regulation of tumor necrosis factor production;0.0343690322907378!GO:0030258;lipid modification;0.0344162227451096!GO:0002573;myeloid leukocyte differentiation;0.0345063443940664!GO:0005684;U2-dependent spliceosome;0.0345760391636591!GO:0008270;zinc ion binding;0.0346505674674658!GO:0051101;regulation of DNA binding;0.0349531922182926!GO:0045113;regulation of integrin biosynthetic process;0.0350980425401201!GO:0045112;integrin biosynthetic process;0.0350980425401201!GO:0005070;SH3/SH2 adaptor activity;0.0352416314418047!GO:0000118;histone deacetylase complex;0.0352823021599017!GO:0002444;myeloid leukocyte mediated immunity;0.0359714578316784!GO:0051325;interphase;0.0359743857100181!GO:0030027;lamellipodium;0.0361078131178495!GO:0030100;regulation of endocytosis;0.0363345660005096!GO:0051540;metal cluster binding;0.0368874241307068!GO:0051536;iron-sulfur cluster binding;0.0368874241307068!GO:0050851;antigen receptor-mediated signaling pathway;0.0377357710998107!GO:0000738;DNA catabolic process, exonucleolytic;0.0382892908884!GO:0006354;RNA elongation;0.0383352384434555!GO:0006310;DNA recombination;0.0385007483238785!GO:0006355;regulation of transcription, DNA-dependent;0.038540547298283!GO:0000049;tRNA binding;0.0389383583524038!GO:0045926;negative regulation of growth;0.03933829020754!GO:0051085;chaperone cofactor-dependent protein folding;0.0394292367557044!GO:0017166;vinculin binding;0.039462337937118!GO:0051052;regulation of DNA metabolic process;0.0395890924295664!GO:0019901;protein kinase binding;0.0396472501609554!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0400850602529713!GO:0006465;signal peptide processing;0.0426697502033316!GO:0045576;mast cell activation;0.0429048547920591!GO:0006383;transcription from RNA polymerase III promoter;0.0429095114375827!GO:0006516;glycoprotein catabolic process;0.0429701978627468!GO:0006644;phospholipid metabolic process;0.0430183352663224!GO:0030660;Golgi-associated vesicle membrane;0.0434001262436166!GO:0050778;positive regulation of immune response;0.0434001262436166!GO:0002697;regulation of immune effector process;0.0442056792770932!GO:0005869;dynactin complex;0.0442066730390309!GO:0006261;DNA-dependent DNA replication;0.0442149907974118!GO:0042611;MHC protein complex;0.0448812328340907!GO:0046483;heterocycle metabolic process;0.0451931760824514!GO:0030433;ER-associated protein catabolic process;0.0457465605710416!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0457465605710416!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0457465605710416!GO:0050900;leukocyte migration;0.0457465605710416!GO:0006302;double-strand break repair;0.0458473837724245!GO:0043488;regulation of mRNA stability;0.0458473837724245!GO:0043487;regulation of RNA stability;0.0458473837724245!GO:0015980;energy derivation by oxidation of organic compounds;0.0461733522994726!GO:0008286;insulin receptor signaling pathway;0.0469924739864216!GO:0006689;ganglioside catabolic process;0.0473484515378965!GO:0051087;chaperone binding;0.0477262848860872!GO:0016408;C-acyltransferase activity;0.0479202188223808!GO:0045944;positive regulation of transcription from RNA polymerase II promoter;0.0479340540765896!GO:0030119;AP-type membrane coat adaptor complex;0.0480517971365164!GO:0000165;MAPKKK cascade;0.0484509683819182!GO:0046426;negative regulation of JAK-STAT cascade;0.0485402843816195!GO:0007162;negative regulation of cell adhesion;0.0499787758072664
 |sample_id=11882
 |sample_note=
@@ Line 76: / Line 100: @@
 |sample_tissue=
 |top_motifs=STAT5{A,B}:6.4778905873;STAT2,4,6:6.18003354626;FOSL2:5.68475478136;NFE2:5.07418563657;NFE2L2:4.92608854988;IRF7:4.81004172826;FOS_FOS{B,L1}_JUN{B,D}:4.73581582326;STAT1,3:4.62069053389;BACH2:4.62043352693;CEBPA,B_DDIT3:4.47472844592;HLF:4.42770105917;IRF1,2:4.19418545682;PAX2:4.02341808358;SREBF1,2:3.93978759112;NFIL3:3.87857229212;SPIB:3.66939531573;NANOG{mouse}:3.46590544287;FOXP3:3.27679368413;EP300:3.18952935985;ETS1,2:3.18640964356;SPI1:3.17019994955;ATF5_CREB3:3.04396449788;ATF4:3.0131838366;ATF6:2.83404035249;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:2.75049993097;RUNX1..3:2.54821383184;CREB1:2.45593627345;NFKB1_REL_RELA:2.43689819303;DMAP1_NCOR{1,2}_SMARC:2.40266324466;NFE2L1:2.35154590997;JUN:2.34461682581;FOXN1:2.28708612509;HSF1,2:2.14592278594;ATF2:2.01978377796;NR1H4:2.01921598157;TGIF1:1.91632007638;ELF1,2,4:1.88756779092;NFATC1..3:1.83632871687;PAX8:1.69628302426;CDX1,2,4:1.69166229746;MAFB:1.66529876111;ALX4:1.43093483608;HIF1A:1.40958194676;XBP1:1.16504370257;ESRRA:1.00530842989;PPARG:1.00308625958;HOX{A5,B5}:0.896510947241;FOXO1,3,4:0.883670602934;PAX3,7:0.877027328195;HMGA1,2:0.847940571652;SRF:0.801737180141;HMX1:0.708658474131;NR6A1:0.703710720642;RBPJ:0.689122985042;TLX2:0.675675639561;PDX1:0.346761146536;RXRA_VDR{dimer}:0.237615033898;AHR_ARNT_ARNT2:0.215820079799;HBP1_HMGB_SSRP1_UBTF:0.215500583079;MEF2{A,B,C,D}:0.177118641754;FOX{D1,D2}:0.127888329344;RFX2..5_RFXANK_RFXAP:0.109526968289;TBP:0.0862365649116;EN1,2:0.0805365195745;ZBTB16:-0.00196934644258;HES1:-0.0189193879791;GLI1..3:-0.0451781266749;NANOG:-0.0637804648499;HOXA9_MEIS1:-0.0673229839486;VSX1,2:-0.0740021941491;IKZF1:-0.124521553361;PRDM1:-0.155040955455;FOX{F1,F2,J1}:-0.192544245967;PAX1,9:-0.247331391485;MYB:-0.248420100651;SMAD1..7,9:-0.351468541445;BPTF:-0.485483116838;TAL1_TCF{3,4,12}:-0.504015233848;GATA4:-0.541670450417;SPZ1:-0.543914764868;POU2F1..3:-0.556445425214;TFCP2:-0.62041605585;SOX2:-0.637678912146;IKZF2:-0.646286281023;EGR1..3:-0.650360042523;OCT4_SOX2{dimer}:-0.651714146448;RFX1:-0.667530554048;ALX1:-0.701986943786;ESR1:-0.702305754454;RORA:-0.717085254571;FOXM1:-0.720459322967;RXR{A,B,G}:-0.7408856019;MZF1:-0.884877899508;NR3C1:-0.903109268723;ZNF238:-0.911223517263;POU5F1:-0.9220143359;REST:-0.955372809262;TEF:-0.956891224557;PAX6:-1.01268772082;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.08641823173;PRRX1,2:-1.09565679651;HOX{A6,A7,B6,B7}:-1.10321289638;NHLH1,2:-1.1130685305;HNF4A_NR2F1,2:-1.17669786013;DBP:-1.1820967348;TFAP4:-1.30099449882;GATA6:-1.31329431424;PAX4:-1.32652533767;HNF1A:-1.34054429842;PITX1..3:-1.35450354899;NKX3-2:-1.36033088742;SP1:-1.36734696146;MYFfamily:-1.41550026709;FOXA2:-1.49296104248;T:-1.49782392334;NKX2-1,4:-1.53249363383;GZF1:-1.53333921792;NKX2-3_NKX2-5:-1.53583716646;MYBL2:-1.54680819866;MED-1{core}:-1.57461313773;ELK1,4_GABP{A,B1}:-1.64022437706;E2F1..5:-1.65844582205;MAZ:-1.67385863921;FOXD3:-1.68481792687;NKX3-1:-1.69357588298;SOX5:-1.69667639246;MTE{core}:-1.70761806418;PATZ1:-1.71974157644;FOXP1:-1.74753763033;FOXL1:-1.75107963456;BREu{core}:-1.75668355864;ZBTB6:-1.76596853366;ZFP161:-1.78561704767;GTF2A1,2:-1.83213723969;ZEB1:-1.83899788664;PBX1:-1.85057839815;TLX1..3_NFIC{dimer}:-1.864079678;TEAD1:-1.87403757887;NKX6-1,2:-1.88035947205;MTF1:-1.90169372163;TFAP2B:-1.90462713506;MYOD1:-1.91596758743;SOX{8,9,10}:-1.92372476803;NKX2-2,8:-1.93301225368;GTF2I:-1.94026561365;NFIX:-1.9436964971;TFDP1:-1.9467777022;NFY{A,B,C}:-1.96732226117;ZNF384:-1.9741130265;CUX2:-1.99954590224;TP53:-2.00023871472;bHLH_family:-2.0287643705;SNAI1..3:-2.05498146476;GFI1B:-2.09230535503;CRX:-2.1006812634;ZNF148:-2.11465644708;XCPE1{core}:-2.12179443406;RREB1:-2.1708848995;POU1F1:-2.20559867105;FOX{I1,J2}:-2.23430108284;GCM1,2:-2.23772564304;HOX{A4,D4}:-2.27839766419;KLF4:-2.28531811769;ADNP_IRX_SIX_ZHX:-2.36492436375;POU6F1:-2.4415709138;NR5A1,2:-2.44963770794;TFAP2{A,C}:-2.45325138394;ZIC1..3:-2.45648304246;HIC1:-2.50765496035;FOXQ1:-2.51884688272;AIRE:-2.5336462081;EBF1:-2.58618125974;TBX4,5:-2.59811245558;POU3F1..4:-2.6851618924;UFEwm:-2.70009674542;PAX5:-2.7235714827;LMO2:-2.74412163745;SOX17:-2.80132367263;NRF1:-2.81770113123;GFI1:-2.85381813876;YY1:-2.92227237643;CDC5L:-3.03996837192;EVI1:-3.04544475684;ONECUT1,2:-3.05086252764;TOPORS:-3.14312602983;HAND1,2:-3.15728499315;ARID5B:-3.19576223013;AR:-3.29502608571;ZNF423:-3.43113006672;ZNF143:-3.44537929126;LHX3,4:-3.57740578857;LEF1_TCF7_TCF7L1,2:-3.76420964446
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11882-125D1;search_select_hide=table117:FF:11882-125D1
 }}

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FF:11882-125D1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 18:26, 4 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0