FFCP PHASE1:Hg19::chr11:94528216..94528229,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:94528216..94528229,+ | |||
|coexpression_cluster_id=C3212 | |coexpression_cluster_id=C3212 | ||
|description=CAGE_peak_at_chr11:94528216..94528229,+ | |description=CAGE_peak_at_chr11:94528216..94528229,+ | ||
|id=chr11:94528216..94528229,+ | |id=chr11:94528216..94528229,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.73e-17!180;CL:0000680!3.20e-11!57;CL:0000056!3.20e-11!57;CL:0000355!3.20e-11!57;CL:0000359!8.13e-11!32;CL:0000183!9.61e-11!59;CL:0000187!1.14e-09!54;CL:0000192!2.12e-09!42;CL:0000514!2.12e-09!42;CL:0000057!1.06e-07!75;CL:0000393!2.33e-07!60;CL:0000211!2.33e-07!60;CL:0002620!9.69e-07!23 | |ontology_enrichment_celltype=CL:0000055!1.73e-17!180;CL:0000680!3.20e-11!57;CL:0000056!3.20e-11!57;CL:0000355!3.20e-11!57;CL:0000359!8.13e-11!32;CL:0000183!9.61e-11!59;CL:0000187!1.14e-09!54;CL:0000192!2.12e-09!42;CL:0000514!2.12e-09!42;CL:0000057!1.06e-07!75;CL:0000393!2.33e-07!60;CL:0000211!2.33e-07!60;CL:0002620!9.69e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000569;3.43e-11;4!CL:0000134;2.00e-10;55!CL:0000359;1.02e-09;32!CL:0000048;1.59e-09;58!CL:0000708;1.59e-09;3!CL:0000723;2.18e-08;61!CL:0000034;2.31e-07;69!CL:0002494;4.99e-07;16!CL:0000192;5.25e-07;43!CL:0002549;8.47e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,2.49e-11,4;CL:0000011,2.49e-11,4;CL:0000359,1.45e-10,32;CL:0000708,1.62e-09,3;CL:0000048,7.41e-09,427;CL:0000723,1.58e-08,433;CL:0000680,2.25e-08,58;CL:0000056,2.25e-08,58;CL:0000355,2.25e-08,58;CL:0000192,2.97e-08,43;CL:0000514,2.97e-08,43;CL:0000034,4.18e-08,441;CL:0002494,5.00e-07,16;CL:0002549,8.22e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000011;3.43e-11;4!CL:0000514;5.25e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!2.12e-09!14 | |ontology_enrichment_disease=DOID:2394!2.12e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.68e-13;14!DOID:193;8.95e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.18e-13,14;DOID:193,8.59e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.94e-13!83;UBERON:0002329!2.94e-13!83;UBERON:0003077!2.94e-13!83;UBERON:0003059!2.94e-13!83;UBERON:0007282!2.94e-13!83;UBERON:0009618!2.94e-13!83;UBERON:0007285!2.94e-13!83;UBERON:0004290!1.27e-12!70;UBERON:0001134!6.02e-12!61;UBERON:0002036!6.02e-12!61;UBERON:0003082!6.02e-12!61;UBERON:0002385!6.93e-12!63;UBERON:0001015!6.93e-12!63;UBERON:0000383!6.93e-12!63;UBERON:0000486!7.37e-12!82;UBERON:0002049!2.29e-11!79;UBERON:0007798!2.29e-11!79;UBERON:0000475!6.48e-11!365;UBERON:0001637!2.09e-10!42;UBERON:0003509!2.09e-10!42;UBERON:0004572!2.09e-10!42;UBERON:0003102!5.85e-09!95;UBERON:0004573!1.05e-08!33;UBERON:0004571!1.05e-08!33;UBERON:0001981!3.57e-08!60;UBERON:0007500!3.57e-08!60;UBERON:0004537!3.57e-08!60;UBERON:0006965!3.57e-08!60;UBERON:0002199!9.14e-08!45;UBERON:0002416!9.14e-08!45;UBERON:0004535!1.19e-07!110;UBERON:0000055!2.01e-07!69;UBERON:0001009!2.18e-07!113;UBERON:0004872!2.19e-07!84;UBERON:0002097!3.19e-07!40;UBERON:0000119!3.88e-07!312 | |ontology_enrichment_uberon=UBERON:0000914!2.94e-13!83;UBERON:0002329!2.94e-13!83;UBERON:0003077!2.94e-13!83;UBERON:0003059!2.94e-13!83;UBERON:0007282!2.94e-13!83;UBERON:0009618!2.94e-13!83;UBERON:0007285!2.94e-13!83;UBERON:0004290!1.27e-12!70;UBERON:0001134!6.02e-12!61;UBERON:0002036!6.02e-12!61;UBERON:0003082!6.02e-12!61;UBERON:0002385!6.93e-12!63;UBERON:0001015!6.93e-12!63;UBERON:0000383!6.93e-12!63;UBERON:0000486!7.37e-12!82;UBERON:0002049!2.29e-11!79;UBERON:0007798!2.29e-11!79;UBERON:0000475!6.48e-11!365;UBERON:0001637!2.09e-10!42;UBERON:0003509!2.09e-10!42;UBERON:0004572!2.09e-10!42;UBERON:0003102!5.85e-09!95;UBERON:0004573!1.05e-08!33;UBERON:0004571!1.05e-08!33;UBERON:0001981!3.57e-08!60;UBERON:0007500!3.57e-08!60;UBERON:0004537!3.57e-08!60;UBERON:0006965!3.57e-08!60;UBERON:0002199!9.14e-08!45;UBERON:0002416!9.14e-08!45;UBERON:0004535!1.19e-07!110;UBERON:0000055!2.01e-07!69;UBERON:0001009!2.18e-07!113;UBERON:0004872!2.19e-07!84;UBERON:0002097!3.19e-07!40;UBERON:0000119!3.88e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.59e-09;3!UBERON:0002118;9.06e-09;5!UBERON:0005284;1.24e-08;5!UBERON:0006876;9.95e-08;11!UBERON:0004573;3.82e-07;33!UBERON:0004571;3.82e-07;33!UBERON:0005629;8.47e-07;2!UBERON:0005358;8.47e-07;2!UBERON:0001886;8.47e-07;2!UBERON:0004086;8.47e-07;2!UBERON:0005282;8.47e-07;2!UBERON:0005281;8.47e-07;2!UBERON:0001637;9.86e-07;42!UBERON:0003509;9.86e-07;42!UBERON:0004572;9.86e-07;42 | |||
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| ||
|short_description=p@chr11:94528216..94528229,+ | |short_description=p@chr11:94528216..94528229,+ | ||
}} | }} |
Latest revision as of 03:40, 24 July 2015
Short description: | p@chr11:94528216..94528229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:94528216..94528229, + |
Coexpression cluster: | C3212_Meningeal_mesenchymal_Fibroblast_alveolar_Smooth_Chondrocyte_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 2.49e-11 | 4 |
migratory trunk neural crest cell | 2.49e-11 | 4 |
vascular associated smooth muscle cell | 1.45e-10 | 32 |
leptomeningeal cell | 1.62e-09 | 3 |
multi fate stem cell | 7.41e-09 | 427 |
somatic stem cell | 1.58e-08 | 433 |
muscle precursor cell | 2.25e-08 | 58 |
myoblast | 2.25e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.25e-08 | 58 |
smooth muscle cell | 2.97e-08 | 43 |
smooth muscle myoblast | 2.97e-08 | 43 |
stem cell | 4.18e-08 | 441 |
cardiocyte | 5.00e-07 | 16 |
fibroblast of choroid plexus | 8.22e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.18e-13 | 14 |
reproductive organ cancer | 8.59e-07 | 29 |