FFCP PHASE1:Hg19::chr14:24664776..24664904,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10548 | |EntrezGene=10548 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11864 | |HGNC=11864 | ||
|TSSclassifier=strong | |||
|UniProt=O15321,Q86SZ6,G3V1B9,E9PQY7,E9PJC4,E9PS99 | |UniProt=O15321,Q86SZ6,G3V1B9,E9PQY7,E9PJC4,E9PS99 | ||
|association_with_transcript=0bp_to_ENST00000261789,ENST00000396854,ENST00000524835,ENST00000525592,ENST00000528010,ENST00000530468,NM_001014842,NM_006405,uc001wna.1,uc001wnb.1,uc001wnc.2,uc010toa.1_5end | |association_with_transcript=0bp_to_ENST00000261789,ENST00000396854,ENST00000524835,ENST00000525592,ENST00000528010,ENST00000530468,NM_001014842,NM_006405,uc001wna.1,uc001wnb.1,uc001wnc.2,uc010toa.1_5end | ||
|cluster_id=chr14:24664776..24664904,- | |||
|coexpression_cluster_id=C562 | |coexpression_cluster_id=C562 | ||
|description=CAGE_peak_3_at_TM9SF1_5end | |description=CAGE_peak_3_at_TM9SF1_5end | ||
|id=chr14:24664776..24664904,- | |id=chr14:24664776..24664904,- | ||
|ontology_enrichment_celltype=CL:0000055!9.10e-22!180;CL:0000220!1.72e-17!246;CL:0002321!6.28e-17!248;CL:0000222!8.70e-17!119;CL:0000548!2.89e-16!679;CL:0000004!2.89e-16!679;CL:0000255!2.89e-16!679;CL:0000012!5.02e-16!682;CL:0000183!1.49e-13!59;CL:0000680!1.06e-11!57;CL:0000056!1.06e-11!57;CL:0000355!1.06e-11!57;CL:0000066!1.21e-11!254;CL:0000192!1.57e-11!42;CL:0000514!1.57e-11!42;CL:0000187!4.53e-11!54;CL:0000057!1.53e-10!75;CL:0000144!1.54e-10!625;CL:0002371!1.62e-10!591;CL:0000359!3.17e-10!32;CL:0000393!1.35e-08!60;CL:0000211!1.35e-08!60;CL:0002078!3.48e-07!44;CL:1000449!4.91e-07!16;CL:1000497!9.87e-07!18;CL:0002518!9.87e-07!18 | |ontology_enrichment_celltype=CL:0000055!9.10e-22!180;CL:0000220!1.72e-17!246;CL:0002321!6.28e-17!248;CL:0000222!8.70e-17!119;CL:0000548!2.89e-16!679;CL:0000004!2.89e-16!679;CL:0000255!2.89e-16!679;CL:0000012!5.02e-16!682;CL:0000183!1.49e-13!59;CL:0000680!1.06e-11!57;CL:0000056!1.06e-11!57;CL:0000355!1.06e-11!57;CL:0000066!1.21e-11!254;CL:0000192!1.57e-11!42;CL:0000514!1.57e-11!42;CL:0000187!4.53e-11!54;CL:0000057!1.53e-10!75;CL:0000144!1.54e-10!625;CL:0002371!1.62e-10!591;CL:0000359!3.17e-10!32;CL:0000393!1.35e-08!60;CL:0000211!1.35e-08!60;CL:0002078!3.48e-07!44;CL:1000449!4.91e-07!16;CL:1000497!9.87e-07!18;CL:0002518!9.87e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.25e-09;32!CL:0000192;1.52e-08;43!CL:0000134;1.72e-07;55!CL:1000449;1.95e-07;15!CL:1000497;4.37e-07;17!CL:0002518;4.37e-07;17!CL:0000723;8.73e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.77e-17,250;CL:0000222,3.89e-17,121;CL:0000066,1.19e-11,253;CL:0000680,1.44e-11,58;CL:0000056,1.44e-11,58;CL:0000355,1.44e-11,58;CL:0000192,2.43e-11,43;CL:0000514,2.43e-11,43;CL:0000187,6.16e-11,55;CL:0000057,9.47e-11,76;CL:0000359,3.17e-10,32;CL:0000393,1.64e-08,61;CL:0000211,1.64e-08,61;CL:0002078,1.37e-07,45;CL:1000449,2.37e-07,15;CL:1000497,5.42e-07,17;CL:0002518,5.42e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;1.52e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!1.13e-07!14 | |ontology_enrichment_disease=DOID:2394!1.13e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.13e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!5.92e-23!118;UBERON:0002100!4.05e-20!216;UBERON:0005256!4.43e-19!143;UBERON:0003104!2.19e-16!238;UBERON:0009142!2.19e-16!238;UBERON:0000490!1.51e-15!138;UBERON:0002049!7.97e-15!79;UBERON:0007798!7.97e-15!79;UBERON:0009569!9.85e-15!113;UBERON:0000055!1.97e-13!69;UBERON:0004872!1.05e-12!84;UBERON:0001637!3.15e-12!42;UBERON:0003509!3.15e-12!42;UBERON:0004572!3.15e-12!42;UBERON:0001981!3.99e-12!60;UBERON:0007500!3.99e-12!60;UBERON:0004537!3.99e-12!60;UBERON:0006965!3.99e-12!60;UBERON:0000486!8.40e-12!82;UBERON:0000475!3.32e-11!365;UBERON:0000466!4.04e-11!126;UBERON:0000477!4.93e-11!286;UBERON:0000468!6.76e-11!659;UBERON:0000481!7.74e-11!347;UBERON:0000926!1.01e-10!448;UBERON:0004120!1.01e-10!448;UBERON:0006603!1.01e-10!448;UBERON:0000914!1.72e-10!83;UBERON:0002329!1.72e-10!83;UBERON:0003077!1.72e-10!83;UBERON:0003059!1.72e-10!83;UBERON:0007282!1.72e-10!83;UBERON:0009618!1.72e-10!83;UBERON:0007285!1.72e-10!83;UBERON:0000119!1.85e-10!312;UBERON:0004573!3.12e-10!33;UBERON:0004571!3.12e-10!33;UBERON:0000483!4.20e-10!309;UBERON:0004290!7.90e-10!70;UBERON:0002417!1.28e-09!61;UBERON:0000916!1.28e-09!61;UBERON:0001048!1.38e-09!168;UBERON:0004535!1.49e-09!110;UBERON:0001134!2.27e-09!61;UBERON:0002036!2.27e-09!61;UBERON:0003082!2.27e-09!61;UBERON:0001009!4.12e-09!113;UBERON:0000480!9.37e-09!626;UBERON:0000467!1.12e-08!625;UBERON:0004111!1.21e-08!241;UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0005177!3.82e-08!107;UBERON:0005172!4.04e-08!55;UBERON:0005173!4.04e-08!55;UBERON:0000464!1.55e-07!104;UBERON:0000080!2.80e-07!18;UBERON:0002120!2.80e-07!18;UBERON:0004875!2.80e-07!18;UBERON:0005721!2.80e-07!18;UBERON:0005754!2.80e-07!18;UBERON:0007297!2.80e-07!18;UBERON:0004119!4.08e-07!169;UBERON:0000925!4.08e-07!169;UBERON:0006595!4.08e-07!169;UBERON:0000353!4.15e-07!17;UBERON:0006555!4.21e-07!17;UBERON:0005103!4.21e-07!17;UBERON:0000083!4.21e-07!17;UBERON:0009201!4.21e-07!17;UBERON:0004819!4.21e-07!17;UBERON:0006553!4.21e-07!17;UBERON:0003074!4.21e-07!17;UBERON:0003060!4.21e-07!17;UBERON:0004211!4.91e-07!16;UBERON:0001285!4.91e-07!16;UBERON:0007684!4.91e-07!16;UBERON:0003220!4.91e-07!16;UBERON:0004208!4.91e-07!16 | |ontology_enrichment_uberon=UBERON:0003914!5.92e-23!118;UBERON:0002100!4.05e-20!216;UBERON:0005256!4.43e-19!143;UBERON:0003104!2.19e-16!238;UBERON:0009142!2.19e-16!238;UBERON:0000490!1.51e-15!138;UBERON:0002049!7.97e-15!79;UBERON:0007798!7.97e-15!79;UBERON:0009569!9.85e-15!113;UBERON:0000055!1.97e-13!69;UBERON:0004872!1.05e-12!84;UBERON:0001637!3.15e-12!42;UBERON:0003509!3.15e-12!42;UBERON:0004572!3.15e-12!42;UBERON:0001981!3.99e-12!60;UBERON:0007500!3.99e-12!60;UBERON:0004537!3.99e-12!60;UBERON:0006965!3.99e-12!60;UBERON:0000486!8.40e-12!82;UBERON:0000475!3.32e-11!365;UBERON:0000466!4.04e-11!126;UBERON:0000477!4.93e-11!286;UBERON:0000468!6.76e-11!659;UBERON:0000481!7.74e-11!347;UBERON:0000926!1.01e-10!448;UBERON:0004120!1.01e-10!448;UBERON:0006603!1.01e-10!448;UBERON:0000914!1.72e-10!83;UBERON:0002329!1.72e-10!83;UBERON:0003077!1.72e-10!83;UBERON:0003059!1.72e-10!83;UBERON:0007282!1.72e-10!83;UBERON:0009618!1.72e-10!83;UBERON:0007285!1.72e-10!83;UBERON:0000119!1.85e-10!312;UBERON:0004573!3.12e-10!33;UBERON:0004571!3.12e-10!33;UBERON:0000483!4.20e-10!309;UBERON:0004290!7.90e-10!70;UBERON:0002417!1.28e-09!61;UBERON:0000916!1.28e-09!61;UBERON:0001048!1.38e-09!168;UBERON:0004535!1.49e-09!110;UBERON:0001134!2.27e-09!61;UBERON:0002036!2.27e-09!61;UBERON:0003082!2.27e-09!61;UBERON:0001009!4.12e-09!113;UBERON:0000480!9.37e-09!626;UBERON:0000467!1.12e-08!625;UBERON:0004111!1.21e-08!241;UBERON:0002385!1.35e-08!63;UBERON:0001015!1.35e-08!63;UBERON:0000383!1.35e-08!63;UBERON:0005177!3.82e-08!107;UBERON:0005172!4.04e-08!55;UBERON:0005173!4.04e-08!55;UBERON:0000464!1.55e-07!104;UBERON:0000080!2.80e-07!18;UBERON:0002120!2.80e-07!18;UBERON:0004875!2.80e-07!18;UBERON:0005721!2.80e-07!18;UBERON:0005754!2.80e-07!18;UBERON:0007297!2.80e-07!18;UBERON:0004119!4.08e-07!169;UBERON:0000925!4.08e-07!169;UBERON:0006595!4.08e-07!169;UBERON:0000353!4.15e-07!17;UBERON:0006555!4.21e-07!17;UBERON:0005103!4.21e-07!17;UBERON:0000083!4.21e-07!17;UBERON:0009201!4.21e-07!17;UBERON:0004819!4.21e-07!17;UBERON:0006553!4.21e-07!17;UBERON:0003074!4.21e-07!17;UBERON:0003060!4.21e-07!17;UBERON:0004211!4.91e-07!16;UBERON:0001285!4.91e-07!16;UBERON:0007684!4.91e-07!16;UBERON:0003220!4.91e-07!16;UBERON:0004208!4.91e-07!16 | ||
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|phase1_expression=21.0746919953846,21.6241529129893,20.7202974021078,34.0249214400643,25.4767823823554,33.148863915814,12.6649939084155,20.8467558230854,14.3652095509911,23.3447239676433,32.0988537267317,20.7519303523664,24.7940959534746,23.0205416505687,24.1920084281379,21.5144046864568,22.9023920649111,22.6396128020086,20.4931775492013,21.6693062215147,33.6601140553017,29.1512890974622,15.4567433050771,13.1399448069969,17.7015121828672,4.73763115637298,3.9408282935974,4.01424984699764,8.26064981382698,4.98978217526377,6.81190942590734,16.5495820406207,26.2049149337078,19.227208528673,5.65510564236202,4.97592313705975,12.6248188913984,6.09394949385065,5.41470008169383,9.98250005292918,9.1805344438369,10.3645973126073,9.01514486719653,5.67053131240302,6.80176698639857,7.5201058968223,10.9241647345672,3.28934310417461,6.50383378879718,4.60307827715441,5.89169625016932,6.14853797710322,5.17118521104928,6.45484683583826,1.35426486594342,9.22387463758763,6.82265375144614,9.21366286224847,6.73384563215986,3.85114832491312,7.67204550958849,8.90598510504134,8.37747362010854,6.39337125799041,6.96502172708602,5.10646702222026,8.09668923694247,7.78870862295904,7.30076085788282,6.95004303056373,5.44859552370032,6.62899744777616,3.79754864929061,6.97142444829408,3.82687739937078,6.9187353017764,6.51506060649672,7.50884464207532,4.018139667427,3.13514018115373,3.77941686678271,4.56660384411585,7.03984977845291,1.63841583378639,4.44754626931777,7.68114400619713,8.00791974072025,9.77079147922622,7.27149360063348,4.77026877267682,7.96898156753228,6.45960908308033,6.49864487812889,9.25199300053181,13.4522055115569,7.63813845847723,8.26181034478099,6.28817220398664,6.7848494669838,4.34684888015763,7.49621213257258,4.2610302516126,3.89653456815823,6.23898558556972,5.59751224202191,4.87374568083967,7.31170432165542,6.14838334683241,6.63302672555379,6.74195408875072,6.90875044464621,4.63684937176084,3.41059095272739,3.47803076516627,4.18142095219907,5.66546713487831,5.3650869104269,5.49803912772208,3.28925599625354,3.18565414324097,3.25541726928209,1.90090408889675,5.11955404864427,3.83959833463255,3.74792179657038,3.31488152861624,6.56902397536837,9.27391018833769,5.88368430723716,6.22744936696036,19.5045493051169,17.4382223522945,15.4713699830672,23.4935449049968,22.0588680679791,21.0027452493194,22.2680065174308,28.2248224775529,12.2895262313288,11.0864698731282,13.3508874253552,12.9669284742736,23.3148984507227,16.3145154825149,11.6837061715686,9.75126528875897,10.7695948020281,11.9245312152671,9.15191857248205,11.1437250398869,14.7084181451362,29.2479762336082,17.0098845787721,14.1326985481002,26.847963917434,19.5333809777448,19.4365318879234,18.3475899010223,18.4998456597089,18.4096337020569,11.6820501961653,15.9657142200888,18.7927784312091,19.8538063386769,32.4056779152704,12.1447630466348,11.900056749187,13.625989138482,29.1301611185178,22.7823758296351,22.3506127595097,6.58902087180316,11.6334079244498,20.9325145028416,15.4061305025549,14.6891393530913,15.0946466127069,37.2887606973458,15.9600771989261,16.8203280042692,20.2823091886439,31.0801111005622,12.7596524513904,15.2223059438748,16.8365760206862,27.0929795484427,26.5040925260799,31.3990718657287,14.6715236110251,11.409436430889,18.3821877078715,13.1526638481017,13.2735814381868,15.1686871238428,14.6991003303523,18.3023132794534,14.2589578022556,30.8880742893334,18.0504858373347,24.5743567723267,31.6191982399145,11.6151918628306,16.2654075833553,13.576141658725,14.9252391099485,13.7919508109559,20.131899893484,19.2834711372036,21.8855355540412,17.5117058831225,14.4113692788502,39.6120246831411,15.6639844442427,15.4584324027377,13.0281799432113,27.3417658230851,15.4924838206306,14.1362913576704,13.0710856072065,15.3563753977871,35.8559688441781,18.6391381721134,16.7864986387383,15.0743465467372,18.0012439589951,12.0457930063382,6.95250124938694,8.48190517257506,7.78499417225773,9.32949495138334,7.0649838245176,5.47466038613745,18.7739438795779,29.5890831568727,17.9575397758225,16.2528774811193,13.7157101517221,17.6277132059367,17.3642230780445,17.3527941516107,19.6323271463661,16.1230788628381,19.4561907671099,16.8539135200206,15.6977172100277,19.2373578473195,20.6683527294901,26.6459370226547,26.3407367252096,32.3419165048192,30.4212083572394,17.6908899001973,22.4500164538934,7.94633578946371,13.6517166782856,15.0979673062702,15.0357891009817,16.8602629886429,12.6666505238655,8.42554850942619,46.9163959646868,20.7986957055916,7.21656710126366,15.9983958865606,19.3724345489106,14.5810112238685,18.0564349904878,14.6495697220641,28.4473583265339,24.8960987007513,12.5570673104573,9.36017060556951,13.0795422814081,33.7441802352397,14.6144451533008,11.3420077793909,12.8068687465073,13.3691611716422,13.0350110916172,11.3312544716067,9.86142460948132,8.29312462163088,9.51191692551945,10.7306068412423,15.8109756787501,27.503166640196,22.2713149699089,18.8179690624976,17.6863287449716,15.6178390078837,9.43227227680908,19.286546507402,23.5418437169971,12.6875234470244,21.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42082,9.98635161278269,7.648404156459,4.16739039994203 | ||
|short_description=p3@TM9SF1 | |short_description=p3@TM9SF1 | ||
}} | }} |
Latest revision as of 13:45, 19 September 2015
Short description: | p3@TM9SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TM9SF1_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000261789, ENST00000396854, ENST00000524835, ENST00000525592, ENST00000528010, ENST00000530468, NM_001014842, NM_006405, uc001wna.1, uc001wnb.1, uc001wnc.2, uc010toa.1_5end |
EntrezGene: | TM9SF1 |
HGNC: | 11864 |
UniProt: | O15321Q86SZ6G3V1B9E9PQY7E9PJC4E9PS99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.77e-17 | 250 |
mesodermal cell | 3.89e-17 | 121 |
epithelial cell | 1.19e-11 | 253 |
muscle precursor cell | 1.44e-11 | 58 |
myoblast | 1.44e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-11 | 58 |
smooth muscle cell | 2.43e-11 | 43 |
smooth muscle myoblast | 2.43e-11 | 43 |
muscle cell | 6.16e-11 | 55 |
fibroblast | 9.47e-11 | 76 |
vascular associated smooth muscle cell | 3.17e-10 | 32 |
electrically responsive cell | 1.64e-08 | 61 |
electrically active cell | 1.64e-08 | 61 |
meso-epithelial cell | 1.37e-07 | 45 |
epithelial cell of nephron | 2.37e-07 | 15 |
kidney cell | 5.42e-07 | 17 |
kidney epithelial cell | 5.42e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.13e-07 | 14 |