FFCP PHASE1:Hg19::chr16:56703737..56703757,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4496 | |EntrezGene=4496 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7400 | |HGNC=7400 | ||
|TSSclassifier=strong | |||
|UniProt=P80294 | |UniProt=P80294 | ||
|association_with_transcript=11bp_to_ENST00000332374,NM_005951,uc002ejw.2_5end | |association_with_transcript=11bp_to_ENST00000332374,NM_005951,uc002ejw.2_5end | ||
|cluster_id=chr16:56703737..56703757,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_3_at_MT1H_5end | |description=CAGE_peak_3_at_MT1H_5end | ||
|id=chr16:56703737..56703757,+ | |id=chr16:56703737..56703757,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.03e-09;7!CL:0000586;2.03e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.98e-09,7;CL:0000586,1.98e-09,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.41e-33!115;UBERON:0001049!3.54e-28!57;UBERON:0005068!3.54e-28!57;UBERON:0006241!3.54e-28!57;UBERON:0007135!3.54e-28!57;UBERON:0001017!4.67e-25!82;UBERON:0005743!1.46e-24!86;UBERON:0002780!1.76e-23!41;UBERON:0001890!1.76e-23!41;UBERON:0006240!1.76e-23!41;UBERON:0002616!1.78e-23!59;UBERON:0003080!1.01e-22!42;UBERON:0002020!7.66e-22!34;UBERON:0003528!7.66e-22!34;UBERON:0001893!1.73e-21!34;UBERON:0000073!5.47e-21!94;UBERON:0001016!5.47e-21!94;UBERON:0000955!8.07e-21!69;UBERON:0006238!8.07e-21!69;UBERON:0002791!1.22e-20!33;UBERON:0003075!1.24e-20!86;UBERON:0007284!1.24e-20!86;UBERON:0002346!2.22e-20!90;UBERON:0001869!2.88e-19!32;UBERON:0003056!1.23e-16!61;UBERON:0002420!3.67e-14!9;UBERON:0007245!3.67e-14!9;UBERON:0010009!3.67e-14!9;UBERON:0010011!3.67e-14!9;UBERON:0000454!3.67e-14!9;UBERON:0000153!5.50e-14!129;UBERON:0007811!5.50e-14!129;UBERON:0002308!6.28e-14!9;UBERON:0000125!6.28e-14!9;UBERON:0002619!1.79e-13!22;UBERON:0000033!8.33e-13!123;UBERON:0009663!1.76e-11!7;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0001950!2.97e-11!20;UBERON:0000924!1.63e-10!173;UBERON:0006601!1.63e-10!173;UBERON:0004121!2.07e-10!169;UBERON:0002298!5.93e-09!8;UBERON:0000349!4.08e-08!5;UBERON:0000922!1.55e-07!612;UBERON:0000062!1.69e-07!511;UBERON:0000369!3.55e-07!4;UBERON:0002435!3.55e-07!4;UBERON:0000204!3.55e-07!4;UBERON:0010082!3.55e-07!4;UBERON:0001871!4.93e-07!7;UBERON:0003076!9.78e-07!15;UBERON:0003057!9.78e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!5.41e-33!115;UBERON:0001049!3.54e-28!57;UBERON:0005068!3.54e-28!57;UBERON:0006241!3.54e-28!57;UBERON:0007135!3.54e-28!57;UBERON:0001017!4.67e-25!82;UBERON:0005743!1.46e-24!86;UBERON:0002780!1.76e-23!41;UBERON:0001890!1.76e-23!41;UBERON:0006240!1.76e-23!41;UBERON:0002616!1.78e-23!59;UBERON:0003080!1.01e-22!42;UBERON:0002020!7.66e-22!34;UBERON:0003528!7.66e-22!34;UBERON:0001893!1.73e-21!34;UBERON:0000073!5.47e-21!94;UBERON:0001016!5.47e-21!94;UBERON:0000955!8.07e-21!69;UBERON:0006238!8.07e-21!69;UBERON:0002791!1.22e-20!33;UBERON:0003075!1.24e-20!86;UBERON:0007284!1.24e-20!86;UBERON:0002346!2.22e-20!90;UBERON:0001869!2.88e-19!32;UBERON:0003056!1.23e-16!61;UBERON:0002420!3.67e-14!9;UBERON:0007245!3.67e-14!9;UBERON:0010009!3.67e-14!9;UBERON:0010011!3.67e-14!9;UBERON:0000454!3.67e-14!9;UBERON:0000153!5.50e-14!129;UBERON:0007811!5.50e-14!129;UBERON:0002308!6.28e-14!9;UBERON:0000125!6.28e-14!9;UBERON:0002619!1.79e-13!22;UBERON:0000033!8.33e-13!123;UBERON:0009663!1.76e-11!7;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0001950!2.97e-11!20;UBERON:0000924!1.63e-10!173;UBERON:0006601!1.63e-10!173;UBERON:0004121!2.07e-10!169;UBERON:0002298!5.93e-09!8;UBERON:0000349!4.08e-08!5;UBERON:0000922!1.55e-07!612;UBERON:0000062!1.69e-07!511;UBERON:0000369!3.55e-07!4;UBERON:0002435!3.55e-07!4;UBERON:0000204!3.55e-07!4;UBERON:0010082!3.55e-07!4;UBERON:0001871!4.93e-07!7;UBERON:0003076!9.78e-07!15;UBERON:0003057!9.78e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.13e-11;22!UBERON:0002420;3.49e-10;9!UBERON:0000125;3.49e-10;9!UBERON:0007245;3.49e-10;9!UBERON:0002308;3.49e-10;9!UBERON:0010009;3.49e-10;9!UBERON:0010011;3.49e-10;9!UBERON:0000454;3.49e-10;9!UBERON:0000160;2.90e-09;17!UBERON:0009663;1.27e-08;7!UBERON:0000922;1.76e-08;49!UBERON:0003528;2.15e-08;34!UBERON:0002020;2.15e-08;34!UBERON:0001875;2.47e-08;2!UBERON:0006514;2.47e-08;2!UBERON:0000473;3.08e-08;8!UBERON:0002791;2.11e-07;32!UBERON:0001869;2.15e-07;32!UBERON:0002108;2.68e-07;4!UBERON:0002107;4.46e-07;19!UBERON:0006925;4.46e-07;19!UBERON:0004921;7.73e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.08e-10,223;UBERON:0002420,3.16e-10,9;UBERON:0007245,3.16e-10,9;UBERON:0010009,3.16e-10,9;UBERON:0010011,3.16e-10,9;UBERON:0000454,3.16e-10,9;UBERON:0000125,3.29e-10,9;UBERON:0002308,3.29e-10,9;UBERON:0005409,6.23e-10,25;UBERON:0001017,8.01e-10,81;UBERON:0000160,2.63e-09,17;UBERON:0007023,4.04e-09,114;UBERON:0003528,9.55e-09,34;UBERON:0002020,9.55e-09,34;UBERON:0009663,1.17e-08,7;UBERON:0001016,1.80e-08,89;UBERON:0001875,2.42e-08,2;UBERON:0006514,2.42e-08,2;UBERON:0000473,3.02e-08,8;UBERON:0001049,4.96e-08,56;UBERON:0005068,4.96e-08,56;UBERON:0006241,4.96e-08,56;UBERON:0007135,4.96e-08,56;UBERON:0002791,1.51e-07,32;UBERON:0001869,1.51e-07,32;UBERON:0000073,2.54e-07,53;UBERON:0002616,2.54e-07,53;UBERON:0002108,2.68e-07,4;UBERON:0002107,4.46e-07,19;UBERON:0006925,4.46e-07,19;UBERON:0008836,4.46e-07,19;UBERON:0001893,5.03e-07,34;UBERON:0002780,6.90e-07,41;UBERON:0001890,6.90e-07,41;UBERON:0003080,6.90e-07,41;UBERON:0006240,6.90e-07,41 | |||
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| ||
|short_description=p3@MT1H | |short_description=p3@MT1H | ||
}} | }} |
Latest revision as of 02:18, 17 September 2015
Short description: | p3@MT1H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MT1H_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 11bp_to_ENST00000332374, NM_005951, uc002ejw.2_5end |
EntrezGene: | MT1H |
HGNC: | 7400 |
UniProt: | P80294 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.98e-09 | 7 |
germ cell | 1.98e-09 | 7 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.08e-10 | 223 |
basal ganglion | 3.16e-10 | 9 |
nuclear complex of neuraxis | 3.16e-10 | 9 |
aggregate regional part of brain | 3.16e-10 | 9 |
collection of basal ganglia | 3.16e-10 | 9 |
cerebral subcortex | 3.16e-10 | 9 |
neural nucleus | 3.29e-10 | 9 |
nucleus of brain | 3.29e-10 | 9 |
gastrointestinal system | 6.23e-10 | 25 |
central nervous system | 8.01e-10 | 81 |
intestine | 2.63e-09 | 17 |
adult organism | 4.04e-09 | 114 |
brain grey matter | 9.55e-09 | 34 |
gray matter | 9.55e-09 | 34 |
telencephalic nucleus | 1.17e-08 | 7 |
nervous system | 1.80e-08 | 89 |
globus pallidus | 2.42e-08 | 2 |
pallidum | 2.42e-08 | 2 |
testis | 3.02e-08 | 8 |
neural tube | 4.96e-08 | 56 |
neural rod | 4.96e-08 | 56 |
future spinal cord | 4.96e-08 | 56 |
neural keel | 4.96e-08 | 56 |
regional part of telencephalon | 1.51e-07 | 32 |
cerebral hemisphere | 1.51e-07 | 32 |
regional part of nervous system | 2.54e-07 | 53 |
regional part of brain | 2.54e-07 | 53 |
small intestine | 2.68e-07 | 4 |
liver | 4.46e-07 | 19 |
digestive gland | 4.46e-07 | 19 |
liver bud | 4.46e-07 | 19 |
telencephalon | 5.03e-07 | 34 |
regional part of forebrain | 6.90e-07 | 41 |
forebrain | 6.90e-07 | 41 |
anterior neural tube | 6.90e-07 | 41 |
future forebrain | 6.90e-07 | 41 |