FFCP PHASE1:Hg19::chr19:21324829..21324855,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:21324829..21324855,+
|short_description=p1@ZNF431
|description=CAGE_peak_1_at_ZNF431_5end
|association_with_transcript=0bp_to_ENST00000311048,NM_133473,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170959 | |EntrezGene=170959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20809 | |HGNC=20809 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF32 | |UniProt=Q8TF32 | ||
|association_with_transcript=0bp_to_ENST00000311048,NM_133473,uc002npp.2,uc010ecq.2,uc010ecr.2_5end | |||
|cluster_id=chr19:21324829..21324855,+ | |||
|coexpression_cluster_id=C1354 | |||
|description=CAGE_peak_1_at_ZNF431_5end | |||
|id=chr19:21324829..21324855,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.58e-34!172;CL:0000566!1.58e-34!172;CL:0002032!4.02e-31!165;CL:0000837!4.02e-31!165;CL:0000988!5.15e-31!182;CL:0000738!2.74e-25!140;CL:0002031!5.30e-20!124;CL:0002087!3.22e-18!119;CL:0000763!3.80e-16!112;CL:0000049!3.80e-16!112;CL:0000838!6.40e-15!52;CL:0000542!9.47e-15!53;CL:0000051!9.47e-15!53;CL:0000791!4.46e-09!18;CL:0000789!4.46e-09!18;CL:0002420!4.46e-09!18;CL:0002419!4.46e-09!18;CL:0000790!4.46e-09!18;CL:0000084!4.65e-08!25;CL:0000827!4.65e-08!25;CL:0000766!1.03e-07!76;CL:0000236!3.77e-07!14;CL:0000557!6.25e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.74e-09;53!CL:0000791;4.15e-09;18!CL:0000789;4.15e-09;18!CL:0002419;4.15e-09;18!CL:0000084;4.69e-08;25!CL:0000236;1.15e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.10e-35,168;CL:0000988,6.95e-32,177;CL:0002032,1.89e-31,161;CL:0000837,1.89e-31,161;CL:0000738,1.27e-25,136;CL:0002031,2.67e-20,120;CL:0002087,1.69e-18,115;CL:0000763,2.10e-16,108;CL:0000049,2.10e-16,108;CL:0000838,6.38e-15,52;CL:0000542,9.45e-15,53;CL:0000051,9.45e-15,53;CL:0000791,4.46e-09,18;CL:0000789,4.46e-09,18;CL:0002420,4.46e-09,18;CL:0002419,4.46e-09,18;CL:0000790,4.46e-09,18;CL:0000084,4.64e-08,25;CL:0000827,4.64e-08,25;CL:0000766,7.27e-08,72;CL:0000236,3.77e-07,14;CL:0000557,4.54e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000051;2.74e-09;53!CL:0000790;4.15e-09;18 | |||
|ontology_enrichment_disease=DOID:1240!9.22e-09!39;DOID:8692!3.90e-08!31;DOID:2531!1.77e-07!51;DOID:0060083!1.77e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.05e-08;31!DOID:1240;5.12e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.22e-09,39;DOID:8692,3.90e-08,31;DOID:2531,1.76e-07,51;DOID:0060083,1.76e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.17e-12!115;UBERON:0002390!2.21e-09!102;UBERON:0003061!2.21e-09!102;UBERON:0001017!2.99e-08!82;UBERON:0000073!6.74e-08!94;UBERON:0001016!6.74e-08!94;UBERON:0002193!9.54e-08!112;UBERON:0005743!1.24e-07!86;UBERON:0001049!2.76e-07!57;UBERON:0005068!2.76e-07!57;UBERON:0006241!2.76e-07!57;UBERON:0007135!2.76e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.08e-12,114;UBERON:0002390,1.66e-09,98;UBERON:0003061,1.66e-09,98;UBERON:0001016,1.99e-08,89;UBERON:0001017,3.40e-08,81;UBERON:0002193,8.20e-08,108;UBERON:0001049,3.08e-07,56;UBERON:0005068,3.08e-07,56;UBERON:0006241,3.08e-07,56;UBERON:0007135,3.08e-07,56 | |||
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| ||
|short_description=p1@ZNF431 | |||
}} | }} |
Latest revision as of 22:11, 16 September 2015
Short description: | p1@ZNF431 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF431_5end |
Coexpression cluster: | C1354_CD4_CD19_CD8_cord_Natural_Mast_thymus |
Association with transcript: | 0bp_to_ENST00000311048, NM_133473, uc002npp.2, uc010ecq.2, uc010ecr.2_5end |
EntrezGene: | ZNF431 |
HGNC: | 20809 |
UniProt: | Q8TF32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.10e-35 | 168 |
hematopoietic cell | 6.95e-32 | 177 |
hematopoietic oligopotent progenitor cell | 1.89e-31 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-31 | 161 |
leukocyte | 1.27e-25 | 136 |
hematopoietic lineage restricted progenitor cell | 2.67e-20 | 120 |
nongranular leukocyte | 1.69e-18 | 115 |
myeloid cell | 2.10e-16 | 108 |
common myeloid progenitor | 2.10e-16 | 108 |
lymphoid lineage restricted progenitor cell | 6.38e-15 | 52 |
lymphocyte | 9.45e-15 | 53 |
common lymphoid progenitor | 9.45e-15 | 53 |
mature alpha-beta T cell | 4.46e-09 | 18 |
alpha-beta T cell | 4.46e-09 | 18 |
immature T cell | 4.46e-09 | 18 |
mature T cell | 4.46e-09 | 18 |
immature alpha-beta T cell | 4.46e-09 | 18 |
T cell | 4.64e-08 | 25 |
pro-T cell | 4.64e-08 | 25 |
myeloid leukocyte | 7.27e-08 | 72 |
B cell | 3.77e-07 | 14 |
granulocyte monocyte progenitor cell | 4.54e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.08e-12 | 114 |
hematopoietic system | 1.66e-09 | 98 |
blood island | 1.66e-09 | 98 |
nervous system | 1.99e-08 | 89 |
central nervous system | 3.40e-08 | 81 |
hemolymphoid system | 8.20e-08 | 108 |
neural tube | 3.08e-07 | 56 |
neural rod | 3.08e-07 | 56 |
future spinal cord | 3.08e-07 | 56 |
neural keel | 3.08e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.22e-09 | 39 |
myeloid leukemia | 3.90e-08 | 31 |
hematologic cancer | 1.76e-07 | 51 |
immune system cancer | 1.76e-07 | 51 |