FFCP PHASE1:Hg19::chr19:36001304..36001382,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:36001304..36001382,-
|short_description=p1@DMKN
|description=CAGE_peak_1_at_DMKN_5end
|association_with_transcript=0bp_to_ENST00000392206,ENST00000402589,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93099 | |EntrezGene=93099 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25063 | |HGNC=25063 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAQ7,C9JCN1,C9J186,C9IYI1,C9J3V3,E7EMS7 | |UniProt=E9PAQ7,C9JCN1,C9J186,C9IYI1,C9J3V3,E7EMS7 | ||
|association_with_transcript=0bp_to_ENST00000392206,ENST00000402589,ENST00000414866,ENST00000436012,ENST00000443640,ENST00000450261,ENST00000458071,ENST00000460051,ENST00000462721,ENST00000464709,ENST00000464894,ENST00000467532,ENST00000467637,ENST00000470857,ENST00000471786,ENST00000472065,ENST00000474928,ENST00000474992,ENST00000476051,ENST00000476246,ENST00000480502,ENST00000482321,ENST00000483855,ENST00000486450,ENST00000488542,ENST00000488762,ENST00000488892,ENST00000490622,ENST00000492341,ENST00000493517,ENST00000493979,ENST00000498211,ENST00000498593_5end | |||
|cluster_id=chr19:36001304..36001382,- | |||
|coexpression_cluster_id=C2484 | |||
|description=CAGE_peak_1_at_DMKN_5end | |||
|id=chr19:36001304..36001382,- | |||
|ontology_enrichment_celltype=CL:0000066!6.78e-37!254;CL:0002076!1.50e-14!43;CL:0000223!1.43e-11!59;CL:0002368!2.86e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.18e-12;42!CL:0002368;3.01e-08;13!CL:0002251;1.93e-07;20!CL:1000507;3.34e-07;10!CL:1000494;3.34e-07;10!CL:1000449;5.96e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.36e-41,253;CL:0002076,2.32e-16,42;CL:0000223,6.88e-13,58;CL:0002368,3.02e-08,13;CL:0002251,1.84e-07,20;CL:1000507,3.37e-07,10;CL:1000494,3.37e-07,10;CL:1000449,6.79e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.95e-07;29!CL:0000223;2.18e-07;58 | |||
|ontology_enrichment_disease=DOID:305!7.42e-23!106;DOID:0050687!2.47e-17!143;DOID:1749!3.45e-09!14;DOID:299!6.52e-08!25;DOID:162!1.15e-07!235;DOID:14566!9.52e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.64e-10;14!DOID:299;1.33e-08;25!DOID:305;4.67e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.05e-25,106;DOID:0050687,4.32e-19,143;DOID:1749,3.61e-10,14;DOID:162,2.86e-09,235;DOID:299,1.15e-08,25;DOID:14566,2.45e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.98e-20!169;UBERON:0000925!2.98e-20!169;UBERON:0006595!2.98e-20!169;UBERON:0001007!2.98e-15!155;UBERON:0001555!2.98e-15!155;UBERON:0007026!2.98e-15!155;UBERON:0004921!5.74e-15!129;UBERON:0004185!5.74e-15!129;UBERON:0000464!7.73e-15!104;UBERON:0000466!9.97e-15!126;UBERON:0000064!1.20e-14!219;UBERON:0000077!1.65e-13!130;UBERON:0001004!3.53e-13!72;UBERON:0005177!5.02e-13!107;UBERON:0000481!1.67e-12!347;UBERON:0001041!4.17e-12!98;UBERON:0000062!1.42e-11!511;UBERON:0001048!2.64e-11!168;UBERON:0000065!3.86e-11!53;UBERON:0001008!1.50e-10!45;UBERON:0006554!2.09e-10!44;UBERON:0005911!3.78e-10!82;UBERON:0005157!2.32e-09!51;UBERON:0008947!2.45e-09!38;UBERON:0003258!2.45e-09!38;UBERON:0009569!2.65e-09!113;UBERON:0002553!8.38e-09!70;UBERON:0003064!1.34e-08!37;UBERON:0000072!1.73e-08!46;UBERON:0000063!4.35e-08!97;UBERON:0005153!7.84e-08!37;UBERON:0000489!9.27e-08!32;UBERON:0000475!9.48e-08!365;UBERON:0003886!1.07e-07!63;UBERON:0005156!1.14e-07!59;UBERON:0000990!1.14e-07!59;UBERON:0003103!2.00e-07!69;UBERON:0000058!2.29e-07!26;UBERON:0003104!2.63e-07!238;UBERON:0009142!2.63e-07!238;UBERON:0005181!2.97e-07!35;UBERON:0005178!3.66e-07!34;UBERON:0002224!3.66e-07!34;UBERON:0002113!5.16e-07!27;UBERON:0003918!5.16e-07!27;UBERON:0005095!5.16e-07!27;UBERON:0007687!5.16e-07!27;UBERON:0007023!8.50e-07!115;UBERON:0003133!9.48e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.53e-11;30!UBERON:0001008;5.53e-11;30!UBERON:0000065;1.38e-08;44!UBERON:0000489;1.58e-08;29!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0005911;1.51e-07;36!UBERON:0001004;1.55e-07;65!UBERON:0000072;1.98e-07;37!UBERON:0004211;3.34e-07;10!UBERON:0009773;3.34e-07;10!UBERON:0001231;3.34e-07;10!UBERON:0004810;3.34e-07;10!UBERON:0006555;5.96e-07;15!UBERON:0004819;5.96e-07;15!UBERON:0001285;5.96e-07;15!UBERON:0007684;5.96e-07;15!UBERON:0004807;6.38e-07;22 | |||
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|phase1_expression=0.726713517082227,0.428201047781966,0.986680828671798,0,0.446961094427288,0.872338524100369,0,0,0,194.867011645697,610.576021975874,121.016520160115,135.048692852968,0.495065411840187,0,0,0,0,0,0.492484232307152,0.408001382488506,1.25381888591235,0,0.136874425072884,0,38.1302894682277,36.288460536876,37.0727779987429,0.786728553697808,0.767658796194425,0.464448369948228,206.869775507759,234.940616647035,198.927657469732,0.0774672005803016,0.853015394924529,1.17440175733939,0.553995408531877,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0.800791974072025,0,1.98313461835459,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0,0.651844533267181,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0.950452044448374,0.752875595388864,0.255973222308837,1.24930726552346,0,0,1.81446068902259,0.534880391567015,0.868946423296794,0,1.34140171940727,2.9408389224012,0.361439152384566,0,2.462390822334,1.5905718941022,5.83961844363163,11.5332476940163,23.5033161310318,15.9859309961489,22.0699742213646,368.666831752053,292.548925356915,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0.183201743930407,0,0,367.627285956156,0.993943903390637,0.379891534993739,0,0,3.19201543978521,5.04609840128076,0,0.49333509683432,2.48968828319813,0.134710672069688,0.326923806226917,0.756787138224657,0,0,0,5.13424639390004,0.298897361103602,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,1.24775401476023,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0.974370051611986,0.757301322732344,0.460249493211497,0,0,0.10075209822764,0,215.292590423913,211.650989578488,227.43604414348,175.886084238877,210.192212557876,160.580029045674,92.7766442387565,189.997600709348,165.699721020427,0,0,0,0.464367928031979,0.721879481669586,41.2890732139055,37.0886318171824,39.5258089008911,42.0220036110421,35.5143493870622,38.4378402959977,45.9774760826161,42.3838364670748,47.323900304406,0,0,29.2217548045294,2.94017422771084,0,2.94848165003288,1.18157981336281,0,129.752802662985,8.92152613552333,253.193908437699,230.42359417812,175.221998913473,216.00884255485,0.977424915930974,0,8.6598805215164,2.08674728955138,4.10930429825376,0,0,0,66.3771694285791,74.6882961022539,0,0,0,457.421109855472,261.884137862022,377.405308859233,135.770720417518,124.972593561004,251.499037532379,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.507983154337352,0.763976851116555,1.17217447210047,6.84289784090821,1.02827492703324,2.40274446275134,0.857479297891735,0,0,0,0.775630294546667,3.57656445851882,0,0.531876233169741,0,0.514414748524284,0,0,0.142977993658148,0,0.823240336780769,0,0.355391948742546,0,13.5647719676814,20.0452695478068,51.1861714852132,0,0,0,0.958499421966331,0,0,0.144781306667579,0.821905290201534,1.61154866915906,1.56919201590938,0.985153801009636,0.431255149719035,0.385029108839245,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0.813795071099207,0.623912584592421,1.07057393278297,0.630809660135739,0,2.10662269809403,25.0148254461583,5.17365356462525,3.32112799267718,2.58116835958384,0.260650843404249,0.195801157462741,0,0.413536052245775,0.215714200818617,0.320182673410333,49.4097941457403,134.812706003503,72.876060692453,0.744323423456331,1.53461973288062,1.96462066103151,1.66580894032411,3.07024349440022,0.482561763430822,4.45254199334973,0,0.177561725313127,0,0,0,227.094905782658,193.087730902063,104.78816540905,0.34444334449382,0.182091168006717,1.18011973463482,261.244575873391,182.757394948776,180.400446910677,131.525302187935,107.029351697376,1.13733384070897,0.170093705276516,7.34114114747274,18.5072703228347,15.7148933775435,71.741637661244,265.326200239885,319.13318742863,151.787083701637,0,0,7.43705362837529,41.0018307124632,29.9348123091159,11.5405933045449,0,0,257.270961022285,317.229400065822,1.6068392984416,0.193341436584244,1.23238893691716,0.307007349452259,0.137836572484531,1.28904293841928,0.725083469571143,0.255679882248303,0,232.555875912896,230.243700703397,107.832742057924,150.219304570492,0.929691098594572,0,0,0,3.19383618190213,0,0,0.286249773483982,0,0,0.190630193923825,2.04718233049067,0.42793898803392,0,0,3.23770423649967,1.92175920815238,2.00281083987667,1.81964233415984,0,0.421258456238981,1.46290121726877,0,0,0.136499911407986,0,1.13008116620243,0,0,0,0,0.655894752046633,0,2.16876448669825,0,0.143411352204052,0.294747123039363,0,1.41904425628239,1.47775344708365,0.329294892959902,0,0,223.235301523188,298.284512613425,321.228405340902,8.94366107379402,439.976490869997,306.618085715079,244.773444752245,195.264890175916,0,0,0,0.238231775457789,0,0,0,0,64.9490352455037,0,147.514210020581,0,0,0,0.797131363644112,0,0,0.635020748171649,0,0,0,0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| ||
|short_description=p1@DMKN | |||
}} | }} |
Latest revision as of 12:20, 17 September 2015
Short description: | p1@DMKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DMKN_5end |
Coexpression cluster: | C2484_Alveolar_Mallassezderived_Urothelial_epidermoid_Esophageal_Corneal_endometrial |
Association with transcript: | 0bp_to_ENST00000392206, ENST00000402589, ENST00000414866, ENST00000436012, ENST00000443640, ENST00000450261, ENST00000458071, ENST00000460051, ENST00000462721, ENST00000464709, ENST00000464894, ENST00000467532, ENST00000467637, ENST00000470857, ENST00000471786, ENST00000472065, ENST00000474928, ENST00000474992, ENST00000476051, ENST00000476246, ENST00000480502, ENST00000482321, ENST00000483855, ENST00000486450, ENST00000488542, ENST00000488762, ENST00000488892, ENST00000490622, ENST00000492341, ENST00000493517, ENST00000493979, ENST00000498211, ENST00000498593_5end |
EntrezGene: | DMKN |
HGNC: | 25063 |
UniProt: | E9PAQ7C9JCN1C9J186C9IYI1C9J3V3E7EMS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.36e-41 | 253 |
endo-epithelial cell | 2.32e-16 | 42 |
endodermal cell | 6.88e-13 | 58 |
respiratory epithelial cell | 3.02e-08 | 13 |
epithelial cell of alimentary canal | 1.84e-07 | 20 |
kidney tubule cell | 3.37e-07 | 10 |
nephron tubule epithelial cell | 3.37e-07 | 10 |
epithelial cell of nephron | 6.79e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.05e-25 | 106 |
cell type cancer | 4.32e-19 | 143 |
squamous cell carcinoma | 3.61e-10 | 14 |
cancer | 2.86e-09 | 235 |
adenocarcinoma | 1.15e-08 | 25 |
disease of cellular proliferation | 2.45e-08 | 239 |