FFCP PHASE1:Hg19::chr19:42547060..42547064,-: Difference between revisions
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|id=chr19:42547060..42547064,-
|short_description=p4@GRIK5
|description=CAGE_peak_4_at_GRIK5_5end
|association_with_transcript=-7bp_to_uc002osi.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2901 | |EntrezGene=2901 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4583 | |HGNC=4583 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc002osi.1_5end | |||
|cluster_id=chr19:42547060..42547064,- | |||
|coexpression_cluster_id=C335 | |||
|description=CAGE_peak_4_at_GRIK5_5end | |||
|id=chr19:42547060..42547064,- | |||
|ontology_enrichment_celltype=CL:0000540!2.23e-07!6;CL:0000031!2.23e-07!6;CL:0000404!2.23e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.74e-88;3 | |||
|ontology_enrichment_disease=DOID:178!9.05e-11!1;DOID:326!9.05e-11!1;DOID:3978!9.05e-11!1;DOID:3394!9.05e-11!1;DOID:5844!9.05e-11!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.13e-47!22;UBERON:0000956!5.33e-42!25;UBERON:0000203!5.33e-42!25;UBERON:0001950!7.58e-35!20;UBERON:0001017!6.36e-34!82;UBERON:0001869!9.11e-33!32;UBERON:0005743!2.90e-32!86;UBERON:0002791!9.30e-32!33;UBERON:0000955!1.17e-31!69;UBERON:0006238!1.17e-31!69;UBERON:0002020!8.33e-31!34;UBERON:0003528!8.33e-31!34;UBERON:0001893!8.33e-31!34;UBERON:0001049!8.61e-30!57;UBERON:0005068!8.61e-30!57;UBERON:0006241!8.61e-30!57;UBERON:0007135!8.61e-30!57;UBERON:0000073!4.99e-29!94;UBERON:0001016!4.99e-29!94;UBERON:0002771!6.91e-29!3;UBERON:0002616!9.99e-29!59;UBERON:0002780!2.07e-25!41;UBERON:0001890!2.07e-25!41;UBERON:0006240!2.07e-25!41;UBERON:0000200!3.31e-25!6;UBERON:0003080!8.80e-25!42;UBERON:0007023!3.99e-21!115;UBERON:0001954!3.02e-20!2;UBERON:0003022!3.02e-20!2;UBERON:0002421!3.02e-20!2;UBERON:0002600!3.02e-20!2;UBERON:0001871!2.34e-19!7;UBERON:0000033!2.71e-19!123;UBERON:0003075!3.89e-19!86;UBERON:0007284!3.89e-19!86;UBERON:0000153!2.73e-18!129;UBERON:0007811!2.73e-18!129;UBERON:0002346!3.38e-18!90;UBERON:0003056!1.08e-16!61;UBERON:0002037!2.58e-15!6;UBERON:0006215!2.58e-15!6;UBERON:0004121!3.43e-15!169;UBERON:0000924!8.78e-15!173;UBERON:0006601!8.78e-15!173;UBERON:0003112!9.97e-11!1;UBERON:0000032!9.97e-11!1;UBERON:0005253!9.97e-11!1;UBERON:0003128!9.97e-11!1;UBERON:0002241!9.97e-11!1;UBERON:0001703!9.97e-11!1;UBERON:0004761!9.97e-11!1;UBERON:0009617!9.97e-11!1;UBERON:0002022!1.33e-10!1;UBERON:0002581!1.61e-10!1;UBERON:0002680!2.16e-10!9;UBERON:0001895!2.16e-10!9;UBERON:0010092!2.16e-10!9;UBERON:0000349!1.18e-08!5;UBERON:0001872!2.16e-08!5;UBERON:0004733!6.48e-08!12;UBERON:0002028!6.48e-08!12;UBERON:0007277!6.48e-08!12;UBERON:0004732!2.43e-07!13;UBERON:0000025!2.82e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.22e-44;6!UBERON:0002680;3.09e-30;9!UBERON:0001895;3.09e-30;9!UBERON:0004733;5.13e-23;12!UBERON:0002028;5.13e-23;12!UBERON:0004732;2.40e-21;13!UBERON:0001871;8.99e-11;6!UBERON:0001016;1.15e-07;83!UBERON:0000073;2.51e-07;53!UBERON:0002616;2.51e-07;53!UBERON:0001017;2.51e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-44,6;UBERON:0006215,1.22e-44,6;UBERON:0002680,3.09e-30,9;UBERON:0001895,3.09e-30,9;UBERON:0010092,3.09e-30,9;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0004732,2.40e-21,13;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0001871,8.99e-11,6;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p4@GRIK5 | |||
}} | }} |
Latest revision as of 07:40, 18 September 2015
Short description: | p4@GRIK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GRIK5_5end |
Coexpression cluster: | C335_cerebellum_parietal_occipital_temporal_duodenum_brain_medial |
Association with transcript: | -7bp_to_uc002osi.1_5end |
EntrezGene: | GRIK5 |
HGNC: | 4583 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-44 | 6 |
rhombic lip | 1.22e-44 | 6 |
regional part of metencephalon | 3.09e-30 | 9 |
metencephalon | 3.09e-30 | 9 |
future metencephalon | 3.09e-30 | 9 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
temporal lobe | 8.99e-11 | 6 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |