FFCP PHASE1:Hg19::chr19:45810751..45810769,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45810751..45810769,-
|short_description=p8@CKM
|description=CAGE_peak_8_at_CKM_5end
|association_with_transcript=138bp_to_M16440_5end
|EntrezGene=1158
|...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1158 | |EntrezGene=1158 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1994 | |HGNC=1994 | ||
|TSSclassifier=strong | |||
|UniProt=P06732 | |UniProt=P06732 | ||
|association_with_transcript=138bp_to_M16440_5end | |||
|cluster_id=chr19:45810751..45810769,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_8_at_CKM_5end | |||
|id=chr19:45810751..45810769,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.24e-10;1!UBERON:0010226;1.43e-10;1!UBERON:0010227;1.65e-10;1!UBERON:0009143;3.45e-10;1!UBERON:0004140;3.45e-10;1!UBERON:0005062;6.84e-10;4!UBERON:0007284;6.84e-10;4!UBERON:0006603;2.35e-07;65!UBERON:0003104;4.58e-07;31 | |||
|ontology_enrichment_disease=DOID:114!1.98e-12!2;DOID:178!5.69e-07!1;DOID:326!5.69e-07!1;DOID:3978!5.69e-07!1;DOID:3394!5.69e-07!1;DOID:5844!5.69e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;6.83e-19;2!DOID:178;3.45e-10;1!DOID:326;3.45e-10;1!DOID:3978;3.45e-10;1!DOID:3394;3.45e-10;1!DOID:5844;3.45e-10;1!DOID:1287;6.39e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.53e-19,2;DOID:178,3.29e-10,1;DOID:326,3.29e-10,1;DOID:3978,3.29e-10,1;DOID:3394,3.29e-10,1;DOID:5844,3.29e-10,1;DOID:1287,6.25e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.81e-21!115;UBERON:0003103!3.58e-13!69;UBERON:0001630!4.39e-13!2;UBERON:0005090!4.39e-13!2;UBERON:0000341!1.41e-12!2;UBERON:0007100!2.17e-12!27;UBERON:0003127!8.11e-12!2;UBERON:0001723!6.18e-09!3;UBERON:0001033!6.18e-09!3;UBERON:0010056!6.18e-09!3;UBERON:0004151!9.80e-09!3;UBERON:0003978!1.38e-08!3;UBERON:0009751!1.38e-08!3;UBERON:0000946!1.38e-08!3;UBERON:0002523!1.38e-08!3;UBERON:0005983!1.38e-08!3;UBERON:0002165!1.38e-08!3;UBERON:0002062!1.38e-08!3;UBERON:0007280!1.38e-08!3;UBERON:0000078!1.28e-07!18;UBERON:0005418!2.09e-07!1;UBERON:0001389!2.09e-07!1;UBERON:0000026!2.09e-07!1;UBERON:0008784!2.09e-07!1;UBERON:0006058!2.09e-07!1;UBERON:0003663!2.09e-07!1;UBERON:0001383!2.09e-07!1;UBERON:0004256!2.09e-07!1;UBERON:0002529!2.09e-07!1;UBERON:0004708!2.09e-07!1;UBERON:0002101!2.09e-07!1;UBERON:0004709!2.09e-07!1;UBERON:0003661!2.09e-07!1;UBERON:0002471!2.09e-07!1;UBERON:0004357!2.09e-07!1;UBERON:0009872!2.09e-07!1;UBERON:0004347!2.09e-07!1;UBERON:0005420!2.09e-07!1;UBERON:0005732!2.09e-07!1;UBERON:0006057!2.09e-07!1;UBERON:0000978!2.09e-07!1;UBERON:0002103!2.09e-07!1;UBERON:0001665!2.09e-07!1;UBERON:0003823!2.09e-07!1;UBERON:0000154!2.09e-07!1;UBERON:0005733!2.09e-07!1;UBERON:0005730!2.09e-07!1;UBERON:0002426!2.36e-07!1;UBERON:0003831!2.36e-07!1;UBERON:0003898!2.36e-07!1;UBERON:0004830!2.36e-07!1;UBERON:0001774!2.36e-07!1;UBERON:0003830!2.36e-07!1;UBERON:0005175!2.36e-07!1;UBERON:0003897!2.36e-07!1;UBERON:0001103!2.36e-07!1;UBERON:0010084!2.36e-07!1;UBERON:0000989!2.99e-07!1;UBERON:0008811!2.99e-07!1;UBERON:0006258!2.99e-07!1;UBERON:0005876!2.99e-07!1;UBERON:0004874!2.99e-07!1;UBERON:0002084!3.36e-07!1;UBERON:0002082!3.36e-07!1;UBERON:0004706!3.36e-07!1;UBERON:0002079!3.78e-07!1;UBERON:0007029!4.25e-07!1;UBERON:0002146!4.51e-07!1;UBERON:0005623!4.51e-07!1;UBERON:0002135!4.78e-07!1;UBERON:0001301!7.15e-07!1;UBERON:0001736!7.57e-07!1;UBERON:0006298!7.57e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;5.07e-22;25!UBERON:0005090;5.86e-20;2!UBERON:0001630;5.86e-20;2!UBERON:0000341;4.53e-19;2!UBERON:0001723;1.60e-13;3!UBERON:0001033;1.60e-13;3!UBERON:0004151;3.26e-13;3!UBERON:0003978;6.97e-13;3!UBERON:0000946;6.97e-13;3!UBERON:0001389;6.73e-11;1!UBERON:0000026;6.73e-11;1!UBERON:0008784;6.73e-11;1!UBERON:0006058;6.73e-11;1!UBERON:0003663;6.73e-11;1!UBERON:0004256;6.73e-11;1!UBERON:0004708;6.73e-11;1!UBERON:0002101;6.73e-11;1!UBERON:0004709;6.73e-11;1!UBERON:0002529;6.73e-11;1!UBERON:0010538;6.73e-11;1!UBERON:0003661;6.73e-11;1!UBERON:0010890;6.73e-11;1!UBERON:0002471;6.73e-11;1!UBERON:0001383;6.73e-11;1!UBERON:0010758;6.73e-11;1!UBERON:0010707;6.73e-11;1!UBERON:0000978;6.73e-11;1!UBERON:0002103;6.73e-11;1!UBERON:0001665;6.73e-11;1!UBERON:0003823;6.73e-11;1!UBERON:0000154;6.73e-11;1!UBERON:0010709;6.73e-11;1!UBERON:0002426;8.14e-11;1!UBERON:0003831;8.14e-11;1!UBERON:0003898;8.14e-11;1!UBERON:0004830;8.14e-11;1!UBERON:0003830;8.14e-11;1!UBERON:0005175;8.14e-11;1!UBERON:0001774;8.14e-11;1!UBERON:0001103;8.14e-11;1!UBERON:0000989;1.24e-10;1!UBERON:0008811;1.24e-10;1!UBERON:0002084;1.43e-10;1!UBERON:0002082;1.43e-10;1!UBERON:0002079;1.65e-10;1!UBERON:0007029;2.18e-10;1!UBERON:0002146;2.18e-10;1!UBERON:0005623;2.18e-10;1!UBERON:0002135;3.45e-10;1!UBERON:0001301;3.45e-10;1!UBERON:0000948;3.95e-10;22!UBERON:0001134;1.20e-09;16!UBERON:0002036;1.20e-09;16!UBERON:0000974;5.93e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.47e-20,27;UBERON:0005090,5.87e-20,2;UBERON:0001630,5.87e-20,2;UBERON:0000341,3.77e-19,2;UBERON:0003103,3.85e-17,68;UBERON:0001723,1.60e-13,3;UBERON:0001033,1.60e-13,3;UBERON:0010056,1.60e-13,3;UBERON:0007023,2.55e-13,114;UBERON:0004151,3.36e-13,3;UBERON:0003978,5.81e-13,3;UBERON:0009751,5.81e-13,3;UBERON:0000946,5.81e-13,3;UBERON:0002523,5.81e-13,3;UBERON:0005983,5.81e-13,3;UBERON:0002165,5.81e-13,3;UBERON:0002062,5.81e-13,3;UBERON:0007280,5.81e-13,3;UBERON:0005418,6.73e-11,1;UBERON:0001389,6.73e-11,1;UBERON:0000026,6.73e-11,1;UBERON:0008784,6.73e-11,1;UBERON:0006058,6.73e-11,1;UBERON:0003663,6.73e-11,1;UBERON:0004256,6.73e-11,1;UBERON:0004708,6.73e-11,1;UBERON:0002101,6.73e-11,1;UBERON:0004709,6.73e-11,1;UBERON:0002529,6.73e-11,1;UBERON:0010538,6.73e-11,1;UBERON:0003661,6.73e-11,1;UBERON:0010890,6.73e-11,1;UBERON:0002471,6.73e-11,1;UBERON:0001383,6.73e-11,1;UBERON:0004357,6.73e-11,1;UBERON:0004347,6.73e-11,1;UBERON:0005420,6.73e-11,1;UBERON:0005732,6.73e-11,1;UBERON:0010758,6.73e-11,1;UBERON:0010707,6.73e-11,1;UBERON:0000978,6.73e-11,1;UBERON:0002103,6.73e-11,1;UBERON:0001665,6.73e-11,1;UBERON:0003823,6.73e-11,1;UBERON:0000154,6.73e-11,1;UBERON:0010709,6.73e-11,1;UBERON:0005733,6.73e-11,1;UBERON:0005730,6.73e-11,1;UBERON:0002426,8.14e-11,1;UBERON:0003831,8.14e-11,1;UBERON:0003898,8.14e-11,1;UBERON:0004830,8.14e-11,1;UBERON:0003830,8.14e-11,1;UBERON:0005175,8.14e-11,1;UBERON:0001774,8.14e-11,1;UBERON:0001103,8.14e-11,1;UBERON:0010084,8.14e-11,1;UBERON:0000989,1.19e-10,1;UBERON:0008811,1.19e-10,1;UBERON:0006258,1.19e-10,1;UBERON:0005876,1.19e-10,1;UBERON:0004874,1.19e-10,1;UBERON:0002084,1.43e-10,1;UBERON:0002082,1.43e-10,1;UBERON:0010226,1.43e-10,1;UBERON:0002079,1.73e-10,1;UBERON:0007029,2.08e-10,1;UBERON:0002146,2.28e-10,1;UBERON:0005623,2.28e-10,1;UBERON:0002135,2.50e-10,1;UBERON:0001301,4.75e-10,1;UBERON:0000948,2.83e-09,24;UBERON:0005498,2.83e-09,24;UBERON:0004140,2.83e-09,24;UBERON:0009881,2.83e-09,24;UBERON:0004141,2.83e-09,24;UBERON:0003084,2.83e-09,24;UBERON:0007005,2.83e-09,24;UBERON:0004139,2.83e-09,24;UBERON:0004291,2.83e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6695964770673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,2.06244381610515,0,1.39775300349294,3.43380838509257,5.35611497860494,1.14211903227435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,7.28301167401975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4128571029538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,51.1468781378437,15.0914326078683,16.2374020387348,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,11.301401040752,1.42838658878244,0,0,0,0.318235791390825,1.41482032270754,28.085460478708,14.3737986455818,0.202056159043763,0.0717222053926763,1.33064142618405,0,0,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.6695964770673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,2.06244381610515,0,1.39775300349294,3.43380838509257,5.35611497860494,1.14211903227435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,7.28301167401975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4128571029538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,51.1468781378437,15.0914326078683,16.2374020387348,2.4285549652957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,11.301401040752,1.42838658878244,0,0,0,0.318235791390825,1.41482032270754,28.085460478708,14.3737986455818,0.202056159043763,0.0717222053926763,1.33064142618405,0,0,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p8@CKM | |||
}} | }} |
Latest revision as of 16:20, 18 September 2015
Short description: | p8@CKM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CKM_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 138bp_to_M16440_5end |
EntrezGene: | CKM |
HGNC: | 1994 |
UniProt: | P06732 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 6.53e-19 | 2 |
vascular disease | 3.29e-10 | 1 |
ischemia | 3.29e-10 | 1 |
extrinsic cardiomyopathy | 3.29e-10 | 1 |
myocardial ischemia | 3.29e-10 | 1 |
myocardial infarction | 3.29e-10 | 1 |
cardiovascular system disease | 6.25e-10 | 4 |