FFCP PHASE1:Hg19::chr8:92082319..92082348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003yet.2_5end | |association_with_transcript=0bp_to_uc003yet.2_5end | ||
|cluster_id=chr8:92082319..92082348,- | |||
|coexpression_cluster_id=C2931 | |coexpression_cluster_id=C2931 | ||
|description=CAGE_peak_2_at_uc003yet.2_5end | |description=CAGE_peak_2_at_uc003yet.2_5end | ||
|id=chr8:92082319..92082348,- | |id=chr8:92082319..92082348,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.14e-08;82 | |||
|ontology_enrichment_disease=DOID:162!1.61e-07!235;DOID:14566!3.81e-07!239 | |ontology_enrichment_disease=DOID:162!1.61e-07!235;DOID:14566!3.81e-07!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.59e-07,235;DOID:14566,3.76e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-28!115;UBERON:0000073!8.37e-16!94;UBERON:0001016!8.37e-16!94;UBERON:0001049!3.09e-15!57;UBERON:0005068!3.09e-15!57;UBERON:0006241!3.09e-15!57;UBERON:0007135!3.09e-15!57;UBERON:0005743!3.09e-15!86;UBERON:0001017!5.25e-15!82;UBERON:0000955!7.66e-13!69;UBERON:0006238!7.66e-13!69;UBERON:0004121!1.17e-12!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0002616!1.35e-12!59;UBERON:0003080!2.68e-12!42;UBERON:0002780!4.35e-12!41;UBERON:0001890!4.35e-12!41;UBERON:0006240!4.35e-12!41;UBERON:0000033!4.61e-11!123;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0002346!1.81e-10!90;UBERON:0000153!2.88e-10!129;UBERON:0007811!2.88e-10!129;UBERON:0002020!4.08e-09!34;UBERON:0003528!4.08e-09!34;UBERON:0001893!2.31e-08!34;UBERON:0002791!2.93e-08!33;UBERON:0001869!1.05e-07!32;UBERON:0003056!1.19e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.24e-28!115;UBERON:0000073!8.37e-16!94;UBERON:0001016!8.37e-16!94;UBERON:0001049!3.09e-15!57;UBERON:0005068!3.09e-15!57;UBERON:0006241!3.09e-15!57;UBERON:0007135!3.09e-15!57;UBERON:0005743!3.09e-15!86;UBERON:0001017!5.25e-15!82;UBERON:0000955!7.66e-13!69;UBERON:0006238!7.66e-13!69;UBERON:0004121!1.17e-12!169;UBERON:0000924!1.31e-12!173;UBERON:0006601!1.31e-12!173;UBERON:0002616!1.35e-12!59;UBERON:0003080!2.68e-12!42;UBERON:0002780!4.35e-12!41;UBERON:0001890!4.35e-12!41;UBERON:0006240!4.35e-12!41;UBERON:0000033!4.61e-11!123;UBERON:0003075!1.18e-10!86;UBERON:0007284!1.18e-10!86;UBERON:0002346!1.81e-10!90;UBERON:0000153!2.88e-10!129;UBERON:0007811!2.88e-10!129;UBERON:0002020!4.08e-09!34;UBERON:0003528!4.08e-09!34;UBERON:0001893!2.31e-08!34;UBERON:0002791!2.93e-08!33;UBERON:0001869!1.05e-07!32;UBERON:0003056!1.19e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.38e-09;53!UBERON:0002616;7.38e-09;53!UBERON:0002780;9.43e-09;41!UBERON:0001890;9.43e-09;41!UBERON:0007023;1.10e-08;114!UBERON:0003528;1.15e-07;34!UBERON:0002020;1.15e-07;34!UBERON:0002791;2.84e-07;32!UBERON:0001893;3.62e-07;34!UBERON:0001017;5.15e-07;75!UBERON:0001869;6.29e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.39e-28,114;UBERON:0001016,2.42e-15,89;UBERON:0001049,5.10e-15,56;UBERON:0005068,5.10e-15,56;UBERON:0006241,5.10e-15,56;UBERON:0007135,5.10e-15,56;UBERON:0001017,8.50e-15,81;UBERON:0000073,8.08e-14,53;UBERON:0002616,8.08e-14,53;UBERON:0000955,1.22e-12,68;UBERON:0006238,1.22e-12,68;UBERON:0004121,1.90e-12,171;UBERON:0000924,1.90e-12,171;UBERON:0006601,1.90e-12,171;UBERON:0002780,4.34e-12,41;UBERON:0001890,4.34e-12,41;UBERON:0003080,4.34e-12,41;UBERON:0006240,4.34e-12,41;UBERON:0003075,4.96e-11,82;UBERON:0007284,4.96e-11,82;UBERON:0002346,8.09e-11,86;UBERON:0011216,2.18e-10,223;UBERON:0010371,1.52e-09,104;UBERON:0003528,4.08e-09,34;UBERON:0002020,4.08e-09,34;UBERON:0001893,2.31e-08,34;UBERON:0002791,4.22e-08,32;UBERON:0010314,4.66e-08,132;UBERON:0003056,1.02e-07,61;UBERON:0001869,1.05e-07,32 | |||
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| ||
|short_description=p2@uc003yet.2 | |short_description=p2@uc003yet.2 | ||
}} | }} |
Latest revision as of 20:31, 31 July 2015
Short description: | p2@uc003yet.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_uc003yet.2_5end |
Coexpression cluster: | C2931_Mast_malignant_pituitary_occipital_pineal_cerebellum_small |
Association with transcript: | 0bp_to_uc003yet.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 8.39e-28 | 114 |
nervous system | 2.42e-15 | 89 |
neural tube | 5.10e-15 | 56 |
neural rod | 5.10e-15 | 56 |
future spinal cord | 5.10e-15 | 56 |
neural keel | 5.10e-15 | 56 |
central nervous system | 8.50e-15 | 81 |
regional part of nervous system | 8.08e-14 | 53 |
regional part of brain | 8.08e-14 | 53 |
brain | 1.22e-12 | 68 |
future brain | 1.22e-12 | 68 |
ectoderm-derived structure | 1.90e-12 | 171 |
ectoderm | 1.90e-12 | 171 |
presumptive ectoderm | 1.90e-12 | 171 |
regional part of forebrain | 4.34e-12 | 41 |
forebrain | 4.34e-12 | 41 |
anterior neural tube | 4.34e-12 | 41 |
future forebrain | 4.34e-12 | 41 |
neural plate | 4.96e-11 | 82 |
presumptive neural plate | 4.96e-11 | 82 |
neurectoderm | 8.09e-11 | 86 |
organ system subdivision | 2.18e-10 | 223 |
ecto-epithelium | 1.52e-09 | 104 |
brain grey matter | 4.08e-09 | 34 |
gray matter | 4.08e-09 | 34 |
telencephalon | 2.31e-08 | 34 |
regional part of telencephalon | 4.22e-08 | 32 |
structure with developmental contribution from neural crest | 4.66e-08 | 132 |
pre-chordal neural plate | 1.02e-07 | 61 |
cerebral hemisphere | 1.05e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.59e-07 | 235 |
disease of cellular proliferation | 3.76e-07 | 239 |