FF:11565-120D8: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00004690 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003 | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004690 | ||
|accession_numbers=CAGE;DRX008332;DRR009204;DRZ000629;DRZ002014;DRZ011979;DRZ013364 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037131;DRR041497;DRZ007139 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0000151,CL:0002371,CL:0000766,CL:0002274,CL:0000219,CL:0000163,CL:0000457,CL:0000738,CL:0000255,CL:0000097 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000260,FF:0000261 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr3:128212033..128212051,-!p1@GATA2!3.38!2404.80!GATA2;;chr19:45971246..45971265,+!p1@FOSB!2.88!13086.14!FOSB;;chr14:35872453..35872485,-!p2@NFKBIA!2.27!438.50!NFKBIA;;chr14:75745523..75745537,+!p1@FOS!2.12!14651.05!FOS;;chr2:157189180..157189290,-!p1@NR4A2!2.12!642.51!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!2.11!126.47!ZNF331;;chr12:52445218..52445237,+!p1@NR4A1!2.09!1423.72!NR4A1;;chr8:22550982..22550999,-!p1@EGR3!1.98!256.26!EGR3;;chr21:39870339..39870443,-!p1@ERG!1.96!90.60!ERG;;chr6:135502501..135502546,+!p1@MYB!1.92!98.07!MYB;;chr14:75988771..75988826,+!p1@BATF!1.90!103.25!BATF;;chr17:38497662..38497713,+!p4@RARA!1.90!90.19!RARA;;chr1:59249688..59249703,-!p3@JUN!1.88!429.17!JUN;;chr14:75746722..75746777,+!p2@FOS!1.87!92.47!FOS;;chrX:106960285..106960299,-!p1@TSC22D3!1.86!1805.41!TSC22D3;;chr18:77155922..77155939,+!p1@NFATC1!1.85!182.66!NFATC1;;chr14:75988831..75988847,+!p2@BATF!1.85!70.08!BATF;;chr14:35873947..35873965,-!p1@NFKBIA!1.83!3911.45!NFKBIA;;chr7:28725740..28725778,+!p1@CREB5!1.83!557.71!CREB5;;chr2:145271342..145271377,-!p5@ZEB2!1.80!62.61!ZEB2;;chr19:54041669..54041697,+!p2@ZNF331!1.79!61.37!ZNF331;;chr9:102584159..102584174,+!p2@NR4A3!1.78!105.12!NR4A3;;chr2:145277640..145277771,-!p1@ZEB2!1.76!705.12!ZEB2;;chr19:45971060..45971122,+!p3@FOSB!1.76!56.19!FOSB;;chr9:3525727..3525828,-!p2@RFX3!1.74!132.69!RFX3;;chr19:18391615..18391637,-!p5@JUND!1.74!69.25!JUND;;chr3:69788576..69788648,+!p1@MITF!1.73!264.34!MITF;;chr20:50159198..50159299,-!p1@NFATC2!1.72!74.43!NFATC2;;chr3:128205876..128205904,-!p4@GATA2!1.72!51.83!GATA2;;chr3:141150883..141150961,+!p6@ZBTB38!1.68!46.86!ZBTB38;;chr2:61108695..61108753,+!p1@REL!1.66!292.95!REL;;chr12:72056800..72056834,+!p1@THAP2!1.66!60.13!THAP2;;chr8:81397820..81397836,+!p2@ZBTB10!1.66!55.98!ZBTB10;;chr3:39195037..39195069,-!p2@CSRNP1!1.65!258.75!CSRNP1;;chr1:25256756..25256774,-!p1@RUNX3!1.63!76.71!RUNX3;;chr19:45972701..45972774,+!p2@FOSB!1.63!55.56!FOSB;;chr7:50344289..50344323,+!p1@IKZF1!1.62!40.64!IKZF1;;chr14:75746664..75746683,+!p7@FOS!1.62!40.64!FOS;;chr7:50344251..50344288,+!p3@IKZF1!1.62!40.43!IKZF1;;chrX:48644984..48645005,+!p1@GATA1!1.61!39.81!GATA1;;chr1:92951607..92951661,-!p1@GFI1!1.60!38.98!GFI1;;chr3:39195075..39195088,-!p1@CSRNP1!1.59!226.19!CSRNP1;;chr10:35484053..35484076,+!p1@CREM!1.59!91.85!CREM;;chr7:50343634..50343717,+!p2@IKZF1!1.59!37.73!IKZF1;;chr1:59249707..59249727,-!p1@JUN!1.58!1476.38!JUN;;chr19:36391434..36391450,-!p1@NFKBID!1.57!69.66!NFKBID;;chr1:158985493..158985535,+!p4@IFI16!1.56!52.45!IFI16;;chr19:13213511..13213545,-!p2@LYL1!1.55!37.53!LYL1;;chr12:52448420..52448460,+!p5@NR4A1!1.55!34.83!NR4A1;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.21!ATXN7;;chr10:3827389..3827408,-!p1@KLF6!1.54!2414.54!KLF6;;chr7:28725715..28725727,+!p3@CREB5!1.52!37.32!CREB5;;chr1:47697881..47697910,-!p4@TAL1!1.52!32.14!TAL1;;chr3:128206762..128206781,-!p2@GATA2!1.51!185.97!GATA2;;chr7:138666053..138666146,-!p1@KIAA1549!1.51!124.60!KIAA1549;;chr19:16435705..16435726,+!p3@KLF2!1.51!31.31!KLF2;;chr4:81118647..81118666,+!p1@PRDM8!1.50!39.81!PRDM8;;chr1:204042233..204042249,+!p1@SOX13!1.48!177.89!SOX13;;chr9:102584262..102584276,+!p1@NR4A3!1.48!64.48!NR4A3;;chr6:15401104..15401166,+!p5@JARID2!1.48!29.03!JARID2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.47!1422.89!NFKBIZ;;chr19:16435625..16435682,+!p1@KLF2!1.47!875.75!KLF2;;chr1:59249732..59249749,-!p2@JUN!1.46!320.32!JUN;;chr3:128205779..128205797,-!p5@GATA2!1.46!27.57!GATA2;;chr11:47400078..47400106,-!p1@SPI1!1.45!27.37!SPI1;;chr10:35484090..35484104,+!p6@CREM!1.45!27.16!CREM;;chr2:157189617..157189667,-!p4@NR4A2!1.45!27.16!NR4A2;;chr14:75746340..75746368,+!p3@FOS!1.45!26.95!FOS;;chr4:103422499..103422632,+!p1@NFKB1!1.44!529.93!NFKB1;;chr12:52448338..52448401,+!p7@NR4A1!1.44!26.33!NR4A1;;chr19:12902289..12902307,+!p1@JUNB!1.43!5713.13!JUNB;;chr19:18392422..18392440,-!p1@JUND!1.43!3380.90!JUND;;chr10:104154246..104154347,+!p3@NFKB2!1.42!150.73!NFKB2;;chr1:47695003..47695042,-!p2@TAL1!1.41!24.46!TAL1;;chr7:17338266..17338282,+!p1@AHR!1.40!253.15!AHR;;chr7:17338324..17338341,+!p3@AHR!1.40!78.37!AHR;;chr12:52448213..52448262,+!p6@NR4A1!1.40!24.26!NR4A1;;chr12:124968706..124968748,-!p18@NCOR2!1.40!24.05!NCOR2;;chr10:3827371..3827386,-!p2@KLF6!1.39!192.19!KLF6;;chr13:41593425..41593480,-!p1@ELF1!1.39!144.09!ELF1;;chr8:81397876..81397898,+!p5@ZBTB10!1.39!27.78!ZBTB10;;chr12:52431016..52431071,+!p4@NR4A1!1.39!27.37!NR4A1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!23.22!ZBED1;;chr9:110252035..110252057,-!p1@KLF4!1.36!337.94!KLF4;;chr14:35874077..35874091,-!p8@NFKBIA!1.36!21.98!NFKBIA;;chr14:35872414..35872425,-!p7@NFKBIA!1.35!23.84!NFKBIA;;chr19:6110474..6110551,-!p1@RFX2!1.34!122.32!RFX2;;chr12:52448151..52448200,+!p8@NR4A1!1.34!20.94!NR4A1;;chr14:75746705..75746720,+!p8@FOS!1.34!20.94!FOS;;chr2:208394817..208394834,+!p3@CREB1!1.33!80.44!CREB1;;chr9:102584128..102584144,+!p3@NR4A3!1.33!38.56!NR4A3;;chr6:135502408..135502459,+!p2@MYB!1.32!23.22!MYB;;chr9:135854091..1358541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| |expression_enrichment_score=chr3:128212033..128212051,-!p1@GATA2!3.38!2404.80!GATA2;;chr19:45971246..45971265,+!p1@FOSB!2.88!13086.14!FOSB;;chr14:35872453..35872485,-!p2@NFKBIA!2.27!438.50!NFKBIA;;chr14:75745523..75745537,+!p1@FOS!2.12!14651.05!FOS;;chr2:157189180..157189290,-!p1@NR4A2!2.12!642.51!NR4A2;;chr19:54058073..54058088,+!p1@ZNF331!2.11!126.47!ZNF331;;chr12:52445218..52445237,+!p1@NR4A1!2.09!1423.72!NR4A1;;chr8:22550982..22550999,-!p1@EGR3!1.98!256.26!EGR3;;chr21:39870339..39870443,-!p1@ERG!1.96!90.60!ERG;;chr6:135502501..135502546,+!p1@MYB!1.92!98.07!MYB;;chr14:75988771..75988826,+!p1@BATF!1.90!103.25!BATF;;chr17:38497662..38497713,+!p4@RARA!1.90!90.19!RARA;;chr1:59249688..59249703,-!p3@JUN!1.88!429.17!JUN;;chr14:75746722..75746777,+!p2@FOS!1.87!92.47!FOS;;chrX:106960285..106960299,-!p1@TSC22D3!1.86!1805.41!TSC22D3;;chr18:77155922..77155939,+!p1@NFATC1!1.85!182.66!NFATC1;;chr14:75988831..75988847,+!p2@BATF!1.85!70.08!BATF;;chr14:35873947..35873965,-!p1@NFKBIA!1.83!3911.45!NFKBIA;;chr7:28725740..28725778,+!p1@CREB5!1.83!557.71!CREB5;;chr2:145271342..145271377,-!p5@ZEB2!1.80!62.61!ZEB2;;chr19:54041669..54041697,+!p2@ZNF331!1.79!61.37!ZNF331;;chr9:102584159..102584174,+!p2@NR4A3!1.78!105.12!NR4A3;;chr2:145277640..145277771,-!p1@ZEB2!1.76!705.12!ZEB2;;chr19:45971060..45971122,+!p3@FOSB!1.76!56.19!FOSB;;chr9:3525727..3525828,-!p2@RFX3!1.74!132.69!RFX3;;chr19:18391615..18391637,-!p5@JUND!1.74!69.25!JUND;;chr3:69788576..69788648,+!p1@MITF!1.73!264.34!MITF;;chr20:50159198..50159299,-!p1@NFATC2!1.72!74.43!NFATC2;;chr3:128205876..128205904,-!p4@GATA2!1.72!51.83!GATA2;;chr3:141150883..141150961,+!p6@ZBTB38!1.68!46.86!ZBTB38;;chr2:61108695..61108753,+!p1@REL!1.66!292.95!REL;;chr12:72056800..72056834,+!p1@THAP2!1.66!60.13!THAP2;;chr8:81397820..81397836,+!p2@ZBTB10!1.66!55.98!ZBTB10;;chr3:39195037..39195069,-!p2@CSRNP1!1.65!258.75!CSRNP1;;chr1:25256756..25256774,-!p1@RUNX3!1.63!76.71!RUNX3;;chr19:45972701..45972774,+!p2@FOSB!1.63!55.56!FOSB;;chr7:50344289..50344323,+!p1@IKZF1!1.62!40.64!IKZF1;;chr14:75746664..75746683,+!p7@FOS!1.62!40.64!FOS;;chr7:50344251..50344288,+!p3@IKZF1!1.62!40.43!IKZF1;;chrX:48644984..48645005,+!p1@GATA1!1.61!39.81!GATA1;;chr1:92951607..92951661,-!p1@GFI1!1.60!38.98!GFI1;;chr3:39195075..39195088,-!p1@CSRNP1!1.59!226.19!CSRNP1;;chr10:35484053..35484076,+!p1@CREM!1.59!91.85!CREM;;chr7:50343634..50343717,+!p2@IKZF1!1.59!37.73!IKZF1;;chr1:59249707..59249727,-!p1@JUN!1.58!1476.38!JUN;;chr19:36391434..36391450,-!p1@NFKBID!1.57!69.66!NFKBID;;chr1:158985493..158985535,+!p4@IFI16!1.56!52.45!IFI16;;chr19:13213511..13213545,-!p2@LYL1!1.55!37.53!LYL1;;chr12:52448420..52448460,+!p5@NR4A1!1.55!34.83!NR4A1;;chr3:63953435..63953499,+!p1@ATXN7!1.55!34.21!ATXN7;;chr10:3827389..3827408,-!p1@KLF6!1.54!2414.54!KLF6;;chr7:28725715..28725727,+!p3@CREB5!1.52!37.32!CREB5;;chr1:47697881..47697910,-!p4@TAL1!1.52!32.14!TAL1;;chr3:128206762..128206781,-!p2@GATA2!1.51!185.97!GATA2;;chr7:138666053..138666146,-!p1@KIAA1549!1.51!124.60!KIAA1549;;chr19:16435705..16435726,+!p3@KLF2!1.51!31.31!KLF2;;chr4:81118647..81118666,+!p1@PRDM8!1.50!39.81!PRDM8;;chr1:204042233..204042249,+!p1@SOX13!1.48!177.89!SOX13;;chr9:102584262..102584276,+!p1@NR4A3!1.48!64.48!NR4A3;;chr6:15401104..15401166,+!p5@JARID2!1.48!29.03!JARID2;;chr3:101568349..101568365,+!p1@NFKBIZ!1.47!1422.89!NFKBIZ;;chr19:16435625..16435682,+!p1@KLF2!1.47!875.75!KLF2;;chr1:59249732..59249749,-!p2@JUN!1.46!320.32!JUN;;chr3:128205779..128205797,-!p5@GATA2!1.46!27.57!GATA2;;chr11:47400078..47400106,-!p1@SPI1!1.45!27.37!SPI1;;chr10:35484090..35484104,+!p6@CREM!1.45!27.16!CREM;;chr2:157189617..157189667,-!p4@NR4A2!1.45!27.16!NR4A2;;chr14:75746340..75746368,+!p3@FOS!1.45!26.95!FOS;;chr4:103422499..103422632,+!p1@NFKB1!1.44!529.93!NFKB1;;chr12:52448338..52448401,+!p7@NR4A1!1.44!26.33!NR4A1;;chr19:12902289..12902307,+!p1@JUNB!1.43!5713.13!JUNB;;chr19:18392422..18392440,-!p1@JUND!1.43!3380.90!JUND;;chr10:104154246..104154347,+!p3@NFKB2!1.42!150.73!NFKB2;;chr1:47695003..47695042,-!p2@TAL1!1.41!24.46!TAL1;;chr7:17338266..17338282,+!p1@AHR!1.40!253.15!AHR;;chr7:17338324..17338341,+!p3@AHR!1.40!78.37!AHR;;chr12:52448213..52448262,+!p6@NR4A1!1.40!24.26!NR4A1;;chr12:124968706..124968748,-!p18@NCOR2!1.40!24.05!NCOR2;;chr10:3827371..3827386,-!p2@KLF6!1.39!192.19!KLF6;;chr13:41593425..41593480,-!p1@ELF1!1.39!144.09!ELF1;;chr8:81397876..81397898,+!p5@ZBTB10!1.39!27.78!ZBTB10;;chr12:52431016..52431071,+!p4@NR4A1!1.39!27.37!NR4A1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!23.22!ZBED1;;chr9:110252035..110252057,-!p1@KLF4!1.36!337.94!KLF4;;chr14:35874077..35874091,-!p8@NFKBIA!1.36!21.98!NFKBIA;;chr14:35872414..35872425,-!p7@NFKBIA!1.35!23.84!NFKBIA;;chr19:6110474..6110551,-!p1@RFX2!1.34!122.32!RFX2;;chr12:52448151..52448200,+!p8@NR4A1!1.34!20.94!NR4A1;;chr14:75746705..75746720,+!p8@FOS!1.34!20.94!FOS;;chr2:208394817..208394834,+!p3@CREB1!1.33!80.44!CREB1;;chr9:102584128..102584144,+!p3@NR4A3!1.33!38.56!NR4A3;;chr6:135502408..135502459,+!p2@MYB!1.32!23.22!MYB;;chr9:135854091..135854159,+!p1@GFI1B!1.32!19.90!GFI1B;;chr5:137801160..137801176,+!p1@EGR1!1.31!1878.19!EGR1;;chr19:45252008..45252024,+!p2@BCL3!1.31!63.65!BCL3;;chr2:157186630..157186686,-!p6@NR4A2!1.30!19.07!NR4A2;;chr8:81397846..81397860,+!p3@ZBTB10!1.29!23.22!ZBTB10;;chr14:35874125..35874149,-!p11@NFKBIA!1.28!18.24!NFKBIA;;chr19:45974146..45974170,+!p7@FOSB!1.27!17.42!FOSB;;chr2:157199008..157199023,-!p3@NR4A2!1.26!36.08!NR4A2;;chr2:157186177..157186204,-!p14@NR4A2!1.26!17.00!NR4A2;;chr19:54041645..54041661,+!p5@ZNF331!1.26!17.00!ZNF331;;chr14:75746579..75746605,+!p9@FOS!1.26!17.00!FOS;;chr11:128563948..128564003,+!p1@FLI1!1.25!199.03!FLI1;;chr2:208031542..208031595,-!p2@KLF7!1.25!117.14!KLF7;;chr3:128205801..128205819,-!p6@GATA2!1.25!16.79!GATA2;;chr19:16435735..16435773,+!p4@KLF2!1.25!16.79!KLF2;;chr3:5021113..5021180,+!p1@BHLHE40!1.24!1118.95!BHLHE40;;chr18:22932080..22932170,-!p1@ZNF521!1.24!69.25!ZNF521;;chr14:35872962..35873025,-!p3@NFKBIA!1.24!40.84!NFKBIA;;chr8:123793988..123794016,+!p1@ZHX2!1.24!28.61!ZHX2;;chr14:35873101..35873119,-!p6@NFKBIA!1.24!21.35!NFKBIA;;chr10:3824125..3824146,-!p12@KLF6!1.24!16.38!KLF6;;chr14:75747296..75747329,+!p4@FOS!1.24!16.38!FOS;;chr2:178128250..178128293,-!p6@NFE2L2!1.23!40.01!NFE2L2;;chr9:102584241..102584261,+!p4@NR4A3!1.23!24.46!NR4A3;;chr10:3824646..3824677,-!p9@KLF6!1.23!16.17!KLF6;;chr14:75988851..75988862,+!p3@BATF!1.23!15.96!BATF;;chr10:3827417..3827428,-!p3@KLF6!1.22!130.41!KLF6;;chr16:30406101..30406114,+!p6@ZNF48!1.22!15.55!ZNF48;;chr12:26277956..26277980,-!p1@BHLHE41!1.21!53.70!BHLHE41;;chr10:35416142..35416169,+!p3@CREM!1.20!38.98!CREM;;chr12:72056773..72056796,+!p3@THAP2!1.20!19.07!THAP2;;chr19:45972563..45972577,+!p17@FOSB!1.20!14.93!FOSB;;chr14:75747250..75747267,+!p5@FOS!1.20!14.72!FOS;;chr3:5022272..5022321,+!p7@BHLHE40!1.19!14.51!BHLHE40;;chr1:151030536..151030549,+!p8@MLLT11!1.18!14.31!MLLT11;;chr20:34359925..34359991,+!p1@PHF20!1.17!601.87!PHF20;;chr2:68592406..68592424,+!p1@PLEK!1.17!13.89!PLEK;;chr1:37940170..37940190,+!p1@ZC3H12A!1.16!163.58!ZC3H12A;;chr12:52430894..52430952,+!p3@NR4A1!1.16!26.12!NR4A1;;chr16:31885093..31885165,+!p1@ZNF267!1.15!199.03!ZNF267;;chr14:75746687..75746702,+!p10@FOS!1.15!13.06!FOS;;chr9:117150254..117150271,-!p1@AKNA!1.14!34.83!AKNA;;chr19:18391708..18391737,-!p7@JUND!1.14!19.28!JUND;;chr19:13213555..13213568,-!p5@LYL1!1.14!12.85!LYL1;;chr19:45973107..45973118,+!p15@FOSB!1.14!12.85!FOSB;;chr19:45974005..45974026,+!p11@FOSB!1.14!12.85!FOSB;;chr19:54041508..54041527,+!p8@ZNF331!1.14!12.65!ZNF331;;chr17:74137321..74137337,-!p1@FOXJ1!1.14!12.65!FOXJ1;;chr8:60031619..60031676,-!p1@TOX!1.13!26.95!TOX;;chr2:61108771..61108789,+!p4@REL!1.13!18.87!REL;;chr2:157186310..157186350,-!p10@NR4A2!1.13!12.44!NR4A2;;chr1:212782094..212782109,+!p1@ATF3!1.12!327.58!ATF3;;chrX:152599604..152599626,+!p1@ZNF275!1.12!92.68!ZNF275;;chrX:106960180..106960197,-!p2@TSC22D3!1.12!46.03!TSC22D3;;chr4:103422471..103422495,+!p2@NFKB1!1.12!33.59!NFKB1;;chr7:17338239..17338262,+!p2@AHR!1.11!88.32!AHR;;chr10:63809013..63809041,+!p3@ARID5B!1.11!66.55!ARID5B;;chr1:59249645..59249656,-!p4@JUN!1.11!29.86!JUN;;chr3:39195139..39195150,-!p3@CSRNP1!1.11!15.13!CSRNP1;;chr19:45972203..45972226,+!p5@FOSB!1.11!11.82!FOSB;;chr1:158985553..158985574,+!p14@IFI16!1.11!11.82!IFI16;;chr2:28615716..28615733,+!p1@FOSL2!1.09!532.63!FOSL2;;chr2:157198916..157198978,-!p2@NR4A2!1.09!39.81!NR4A2;;chr10:63809077..63809089,+!p5@ARID5B!1.09!24.88!ARID5B;;chr15:37390850..37390909,-!p3@MEIS2!1.09!22.18!MEIS2;;chr10:3824332..3824425,-!p4@KLF6!1.09!18.45!KLF6;;chr19:18391652..18391669,-!p8@JUND!1.09!15.76!JUND;;chr17:40429090..40429125,-!p3@STAT5B!1.09!11.40!STAT5B;;chr6:44233252..44233296,-!p1@NFKBIE!1.08!109.68!NFKBIE;;chr22:38597987..38598021,+!p2@MAFF!1.08!67.17!MAFF;;chr12:54694758..54694805,-!p1@NFE2!1.08!13.27!NFE2;;chr1:158985469..158985489,+!p7@IFI16!1.08!13.06!IFI16;;chr1:47697539..47697573,-!p3@TAL1!1.08!10.99!TAL1;;chr17:38497715..38497734,+!p8@RARA!1.08!10.99!RARA;;chr8:22550530..22550609,-!p2@EGR3!1.08!10.99!EGR3;;chr17:38474489..38474548,+!p1@RARA!1.07!338.77!RARA;;chr4:106068026..106068084,+!p1@TET2!1.07!97.86!TET2;;chr20:50179368..50179392,-!p2@NFATC2!1.07!14.10!NFATC2;;chrX:107019163..107019179,-!p7@TSC22D3!1.07!12.44!TSC22D3;;chr11:47399996..47400014,-!p4@SPI1!1.07!10.78!SPI1;;chr19:58545369..58545404,+!p2@ZSCAN1!1.07!10.78!ZSCAN1;;chr10:104155480..104155534,+!p2@NFKB2!1.06!69.04!NFKB2;;chr19:45504688..45504782,+!p1@RELB!1.06!63.65!RELB;;chrX:106960221..106960236,-!p3@TSC22D3!1.06!29.44!TSC22D3;;chr4:87857474..87857489,+!p7@AFF1!1.06!18.45!AFF1;;chr1:204042723..204042784,+!p3@SOX13!1.06!17.62!SOX13;;chr18:3449330..3449344,+!p10@TGIF1!1.06!14.10!TGIF1;;chr14:75746624..75746635,+!p12@FOS!1.06!10.37!FOS;;chr12:52448515..52448538,+!p9@NR4A1!1.06!10.37!NR4A1;;chr19:6110555..6110617,-!p2@RFX2!1.05!35.04!RFX2;;chr2:145275162..145275202,-!p2@ZEB2!1.04!59.71!ZEB2;;chr1:204042275..204042286,+!p4@SOX13!1.04!15.96!SOX13;;chr19:11925071..11925113,+!p1@ZNF440!1.03!71.32!ZNF440;;chr19:11959532..1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| ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000097;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000151;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405 | |||
|ffid_belonging_in_development=CL:0000049,CL:0000134 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mast%2520cell%252c%2520donor2.CNhs12594.11565-120D8.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11565-120D8 | |id=FF:11565-120D8 | ||
|is_a=EFO:0002091;;FF:0000210;;FF:0000261 | |is_a=EFO:0002091;;FF:0000210;;FF:0000261 | ||
|is_obsolete= | |is_obsolete= | ||
|library_id=CNhs12594 | |||
|library_id_phase_based=2:CNhs12594 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11565 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10009.GCCAAT.11565 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11565 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10009.GCCAAT.11565 | |||
|name=Mast cell, donor2 | |name=Mast cell, donor2 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 43: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12594,LSID912,release011,COMPLETED | |profile_hcage=CNhs12594,LSID912,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10009,,, | |profile_srnaseq=SRhi10009,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=120 | |rna_box=120 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 82: | ||
|rna_tube_id=120D8 | |rna_tube_id=120D8 | ||
|rna_weight_ug=8.67744 | |rna_weight_ug=8.67744 | ||
|rnaseq_library_id=SRhi10009.GCCAAT | |||
|sample_age=76 | |sample_age=76 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 79: | Line 106: | ||
|top_motifs=ATF4:3.33386738573;CREB1:2.799649005;GATA6:2.7538377651;PPARG:2.7271280513;NFKB1_REL_RELA:2.60623832437;HSF1,2:2.54663995702;PAX2:2.43599377068;ATF5_CREB3:2.35267094945;EGR1..3:2.059795822;MAFB:2.0442048434;RFX1:1.68572381835;JUN:1.61463279334;FOXN1:1.595046261;SREBF1,2:1.55115762463;EP300:1.52072147266;ATF2:1.50056038335;RXRA_VDR{dimer}:1.46937196628;RUNX1..3:1.46773143893;TGIF1:1.46737919695;PATZ1:1.44051844677;HIF1A:1.43294887023;XBP1:1.39341486397;RFX2..5_RFXANK_RFXAP:1.37442356885;FOX{D1,D2}:1.37416104883;ESRRA:1.30673967962;SPIB:1.29228497957;FOS_FOS{B,L1}_JUN{B,D}:1.28634651049;SPI1:1.28323992963;SP1:1.27906224961;FOSL2:1.26455246142;BACH2:1.24229410059;STAT1,3:1.23807169698;ESR1:1.23299396632;TFAP2{A,C}:1.21943982685;ELF1,2,4:1.21895614796;NFE2L1:1.16048573756;ATF6:1.12374773757;NFE2:1.09994087018;BPTF:1.0088244799;FOX{F1,F2,J1}:0.978044332501;ETS1,2:0.960445376417;TLX2:0.956305951121;HOXA9_MEIS1:0.927040206971;RXR{A,B,G}:0.925503033335;CDX1,2,4:0.911368314218;SPZ1:0.821927933489;MEF2{A,B,C,D}:0.803254082537;SMAD1..7,9:0.764890283247;MAZ:0.701618819367;NFATC1..3:0.682247449178;MYB:0.67701265319;NHLH1,2:0.632327164881;HES1:0.621511889131;TFAP4:0.613849995806;TBX4,5:0.609393406151;HBP1_HMGB_SSRP1_UBTF:0.607171090822;DMAP1_NCOR{1,2}_SMARC:0.605188333361;NANOG{mouse}:0.598983598252;TBP:0.579591265078;AR:0.579471486212;ZNF238:0.473485585569;TFCP2:0.461328808932;ZFP161:0.426684307029;SRF:0.424530586395;ZNF148:0.406955551858;NFIL3:0.344579607336;BREu{core}:0.343567030726;FOX{I1,J2}:0.319556692412;SOX2:0.297849226899;HMX1:0.279236564295;EBF1:0.277446854105;IKZF2:0.228792692227;TFAP2B:0.219179583271;MYFfamily:0.211957785869;ZIC1..3:0.208041312833;VSX1,2:0.203229135698;GLI1..3:0.180032286214;PAX3,7:0.171969052518;POU2F1..3:0.171301832844;XCPE1{core}:0.150560649632;PBX1:0.142395409392;MED-1{core}:0.135390257609;DBP:0.114693759948;HIC1:0.114551809852;NFE2L2:0.0973554988556;NFY{A,B,C}:0.0279272336843;PAX1,9:0.0133015045606;FOXQ1:0.00549935299057;CRX:-0.0196359087958;FOXO1,3,4:-0.0841977856756;bHLH_family:-0.0872233717113;TAL1_TCF{3,4,12}:-0.0888765723814;ZBTB6:-0.0987515706235;MTE{core}:-0.117917818278;MTF1:-0.122597176801;FOXP1:-0.151519890659;AHR_ARNT_ARNT2:-0.154851594561;RREB1:-0.157921171172;HOX{A6,A7,B6,B7}:-0.183295753204;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.213864363786;NR6A1:-0.245171878331;ALX1:-0.247889859408;GTF2I:-0.277180472887;IRF1,2:-0.293081658721;MZF1:-0.306437646206;NKX3-2:-0.371948147193;TLX1..3_NFIC{dimer}:-0.38802477235;REST:-0.389566865778;HLF:-0.391994556829;GZF1:-0.413776407087;LHX3,4:-0.434066693673;EN1,2:-0.43803921338;SOX5:-0.438887233382;ELK1,4_GABP{A,B1}:-0.439646892715;PAX5:-0.465962292631;RBPJ:-0.496145980472;HNF4A_NR2F1,2:-0.505906530885;ZNF384:-0.510434401085;STAT2,4,6:-0.531193617917;CEBPA,B_DDIT3:-0.552976995997;CUX2:-0.553213093218;TFDP1:-0.560300920441;EVI1:-0.565501558129;FOXL1:-0.612890074518;NRF1:-0.615649361746;NKX6-1,2:-0.616734155505;E2F1..5:-0.622225989106;PAX6:-0.624722454395;PRRX1,2:-0.644954913782;HOX{A5,B5}:-0.647841798742;ZNF423:-0.652714881178;FOXP3:-0.659408335296;TOPORS:-0.669688217503;NKX2-3_NKX2-5:-0.701124332191;PAX8:-0.711509279585;SOX{8,9,10}:-0.712825972983;HNF1A:-0.728352440392;PAX4:-0.731159949696;ZNF143:-0.734828173763;TP53:-0.741924503939;ZEB1:-0.746020358946;TEAD1:-0.756227490133;RORA:-0.789231296204;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.799807486876;GATA4:-0.827868310793;NKX3-1:-0.848522143134;NR5A1,2:-0.851636605308;PITX1..3:-0.85825196107;NKX2-1,4:-0.89482873524;IKZF1:-0.905389093062;LEF1_TCF7_TCF7L1,2:-0.922677656;POU5F1:-0.923281557818;T:-0.943800100838;PRDM1:-0.966970167827;SNAI1..3:-0.982430659219;POU6F1:-0.995853227555;GTF2A1,2:-1.02856632349;OCT4_SOX2{dimer}:-1.03050989347;HAND1,2:-1.04139289673;NANOG:-1.08845373292;ZBTB16:-1.09649331035;YY1:-1.14815829114;FOXM1:-1.16451176487;HOX{A4,D4}:-1.21806975913;ARID5B:-1.22561413294;NKX2-2,8:-1.229645039;IRF7:-1.26001563964;STAT5{A,B}:-1.27334540163;SOX17:-1.28121812057;GFI1:-1.31504476213;UFEwm:-1.35309539076;FOXA2:-1.36395594674;AIRE:-1.3805062835;ONECUT1,2:-1.45664843387;POU1F1:-1.48141657697;NFIX:-1.48698144643;MYOD1:-1.53885555302;NR3C1:-1.54007983816;FOXD3:-1.55757165927;HMGA1,2:-1.61783149538;ALX4:-1.73949601709;GCM1,2:-1.77193924695;MYBL2:-1.81156413647;NR1H4:-1.97703042797;POU3F1..4:-2.11417507353;GFI1B:-2.15348422062;KLF4:-2.21393068929;PDX1:-2.24955954679;ADNP_IRX_SIX_ZHX:-2.49032173364;CDC5L:-2.54061109569;LMO2:-2.6975593626;TEF:-3.06987263563 | |top_motifs=ATF4:3.33386738573;CREB1:2.799649005;GATA6:2.7538377651;PPARG:2.7271280513;NFKB1_REL_RELA:2.60623832437;HSF1,2:2.54663995702;PAX2:2.43599377068;ATF5_CREB3:2.35267094945;EGR1..3:2.059795822;MAFB:2.0442048434;RFX1:1.68572381835;JUN:1.61463279334;FOXN1:1.595046261;SREBF1,2:1.55115762463;EP300:1.52072147266;ATF2:1.50056038335;RXRA_VDR{dimer}:1.46937196628;RUNX1..3:1.46773143893;TGIF1:1.46737919695;PATZ1:1.44051844677;HIF1A:1.43294887023;XBP1:1.39341486397;RFX2..5_RFXANK_RFXAP:1.37442356885;FOX{D1,D2}:1.37416104883;ESRRA:1.30673967962;SPIB:1.29228497957;FOS_FOS{B,L1}_JUN{B,D}:1.28634651049;SPI1:1.28323992963;SP1:1.27906224961;FOSL2:1.26455246142;BACH2:1.24229410059;STAT1,3:1.23807169698;ESR1:1.23299396632;TFAP2{A,C}:1.21943982685;ELF1,2,4:1.21895614796;NFE2L1:1.16048573756;ATF6:1.12374773757;NFE2:1.09994087018;BPTF:1.0088244799;FOX{F1,F2,J1}:0.978044332501;ETS1,2:0.960445376417;TLX2:0.956305951121;HOXA9_MEIS1:0.927040206971;RXR{A,B,G}:0.925503033335;CDX1,2,4:0.911368314218;SPZ1:0.821927933489;MEF2{A,B,C,D}:0.803254082537;SMAD1..7,9:0.764890283247;MAZ:0.701618819367;NFATC1..3:0.682247449178;MYB:0.67701265319;NHLH1,2:0.632327164881;HES1:0.621511889131;TFAP4:0.613849995806;TBX4,5:0.609393406151;HBP1_HMGB_SSRP1_UBTF:0.607171090822;DMAP1_NCOR{1,2}_SMARC:0.605188333361;NANOG{mouse}:0.598983598252;TBP:0.579591265078;AR:0.579471486212;ZNF238:0.473485585569;TFCP2:0.461328808932;ZFP161:0.426684307029;SRF:0.424530586395;ZNF148:0.406955551858;NFIL3:0.344579607336;BREu{core}:0.343567030726;FOX{I1,J2}:0.319556692412;SOX2:0.297849226899;HMX1:0.279236564295;EBF1:0.277446854105;IKZF2:0.228792692227;TFAP2B:0.219179583271;MYFfamily:0.211957785869;ZIC1..3:0.208041312833;VSX1,2:0.203229135698;GLI1..3:0.180032286214;PAX3,7:0.171969052518;POU2F1..3:0.171301832844;XCPE1{core}:0.150560649632;PBX1:0.142395409392;MED-1{core}:0.135390257609;DBP:0.114693759948;HIC1:0.114551809852;NFE2L2:0.0973554988556;NFY{A,B,C}:0.0279272336843;PAX1,9:0.0133015045606;FOXQ1:0.00549935299057;CRX:-0.0196359087958;FOXO1,3,4:-0.0841977856756;bHLH_family:-0.0872233717113;TAL1_TCF{3,4,12}:-0.0888765723814;ZBTB6:-0.0987515706235;MTE{core}:-0.117917818278;MTF1:-0.122597176801;FOXP1:-0.151519890659;AHR_ARNT_ARNT2:-0.154851594561;RREB1:-0.157921171172;HOX{A6,A7,B6,B7}:-0.183295753204;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.213864363786;NR6A1:-0.245171878331;ALX1:-0.247889859408;GTF2I:-0.277180472887;IRF1,2:-0.293081658721;MZF1:-0.306437646206;NKX3-2:-0.371948147193;TLX1..3_NFIC{dimer}:-0.38802477235;REST:-0.389566865778;HLF:-0.391994556829;GZF1:-0.413776407087;LHX3,4:-0.434066693673;EN1,2:-0.43803921338;SOX5:-0.438887233382;ELK1,4_GABP{A,B1}:-0.439646892715;PAX5:-0.465962292631;RBPJ:-0.496145980472;HNF4A_NR2F1,2:-0.505906530885;ZNF384:-0.510434401085;STAT2,4,6:-0.531193617917;CEBPA,B_DDIT3:-0.552976995997;CUX2:-0.553213093218;TFDP1:-0.560300920441;EVI1:-0.565501558129;FOXL1:-0.612890074518;NRF1:-0.615649361746;NKX6-1,2:-0.616734155505;E2F1..5:-0.622225989106;PAX6:-0.624722454395;PRRX1,2:-0.644954913782;HOX{A5,B5}:-0.647841798742;ZNF423:-0.652714881178;FOXP3:-0.659408335296;TOPORS:-0.669688217503;NKX2-3_NKX2-5:-0.701124332191;PAX8:-0.711509279585;SOX{8,9,10}:-0.712825972983;HNF1A:-0.728352440392;PAX4:-0.731159949696;ZNF143:-0.734828173763;TP53:-0.741924503939;ZEB1:-0.746020358946;TEAD1:-0.756227490133;RORA:-0.789231296204;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.799807486876;GATA4:-0.827868310793;NKX3-1:-0.848522143134;NR5A1,2:-0.851636605308;PITX1..3:-0.85825196107;NKX2-1,4:-0.89482873524;IKZF1:-0.905389093062;LEF1_TCF7_TCF7L1,2:-0.922677656;POU5F1:-0.923281557818;T:-0.943800100838;PRDM1:-0.966970167827;SNAI1..3:-0.982430659219;POU6F1:-0.995853227555;GTF2A1,2:-1.02856632349;OCT4_SOX2{dimer}:-1.03050989347;HAND1,2:-1.04139289673;NANOG:-1.08845373292;ZBTB16:-1.09649331035;YY1:-1.14815829114;FOXM1:-1.16451176487;HOX{A4,D4}:-1.21806975913;ARID5B:-1.22561413294;NKX2-2,8:-1.229645039;IRF7:-1.26001563964;STAT5{A,B}:-1.27334540163;SOX17:-1.28121812057;GFI1:-1.31504476213;UFEwm:-1.35309539076;FOXA2:-1.36395594674;AIRE:-1.3805062835;ONECUT1,2:-1.45664843387;POU1F1:-1.48141657697;NFIX:-1.48698144643;MYOD1:-1.53885555302;NR3C1:-1.54007983816;FOXD3:-1.55757165927;HMGA1,2:-1.61783149538;ALX4:-1.73949601709;GCM1,2:-1.77193924695;MYBL2:-1.81156413647;NR1H4:-1.97703042797;POU3F1..4:-2.11417507353;GFI1B:-2.15348422062;KLF4:-2.21393068929;PDX1:-2.24955954679;ADNP_IRX_SIX_ZHX:-2.49032173364;CDC5L:-2.54061109569;LMO2:-2.6975593626;TEF:-3.06987263563 | ||
|xref= | |xref= | ||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11565-120D8;search_select_hide=table117:FF:11565-120D8 | |||
}} | }} | ||
Latest revision as of 18:09, 4 June 2020
| Name: | Mast cell, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12594 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12594
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12594
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.191 |
| 10 | 10 | 0.395 |
| 100 | 100 | 0.203 |
| 101 | 101 | 0.421 |
| 102 | 102 | 0.807 |
| 103 | 103 | 0.405 |
| 104 | 104 | 0.859 |
| 105 | 105 | 0.228 |
| 106 | 106 | 0.318 |
| 107 | 107 | 0.0331 |
| 108 | 108 | 0.156 |
| 109 | 109 | 0.868 |
| 11 | 11 | 0.42 |
| 110 | 110 | 0.269 |
| 111 | 111 | 0.191 |
| 112 | 112 | 0.731 |
| 113 | 113 | 0.505 |
| 114 | 114 | 0.127 |
| 115 | 115 | 0.717 |
| 116 | 116 | 0.0922 |
| 117 | 117 | 0.0898 |
| 118 | 118 | 0.322 |
| 119 | 119 | 0.164 |
| 12 | 12 | 0.604 |
| 120 | 120 | 0.0462 |
| 121 | 121 | 0.153 |
| 122 | 122 | 0.243 |
| 123 | 123 | 0.256 |
| 124 | 124 | 0.0247 |
| 125 | 125 | 0.249 |
| 126 | 126 | 0.295 |
| 127 | 127 | 0.771 |
| 128 | 128 | 0.774 |
| 129 | 129 | 0.0125 |
| 13 | 13 | 0.462 |
| 130 | 130 | 0.51 |
| 131 | 131 | 0.943 |
| 132 | 132 | 0.0623 |
| 133 | 133 | 0.0883 |
| 134 | 134 | 0.438 |
| 135 | 135 | 0.792 |
| 136 | 136 | 0.175 |
| 137 | 137 | 0.0446 |
| 138 | 138 | 0.256 |
| 139 | 139 | 0.838 |
| 14 | 14 | 0.66 |
| 140 | 140 | 0.241 |
| 141 | 141 | 0.225 |
| 142 | 142 | 0.139 |
| 143 | 143 | 0.86 |
| 144 | 144 | 0.997 |
| 145 | 145 | 0.411 |
| 146 | 146 | 0.318 |
| 147 | 147 | 0.134 |
| 148 | 148 | 0.737 |
| 149 | 149 | 0.0858 |
| 15 | 15 | 0.637 |
| 150 | 150 | 0.706 |
| 151 | 151 | 0.495 |
| 152 | 152 | 0.0305 |
| 153 | 153 | 0.551 |
| 154 | 154 | 0.849 |
| 155 | 155 | 0.209 |
| 156 | 156 | 0.826 |
| 157 | 157 | 0.934 |
| 158 | 158 | 0.185 |
| 159 | 159 | 0.828 |
| 16 | 16 | 0.211 |
| 160 | 160 | 0.0642 |
| 161 | 161 | 0.448 |
| 162 | 162 | 0.0663 |
| 163 | 163 | 0.115 |
| 164 | 164 | 0.432 |
| 165 | 165 | 0.767 |
| 166 | 166 | 0.021 |
| 167 | 167 | 0.411 |
| 168 | 168 | 0.312 |
| 169 | 169 | 0.851 |
| 17 | 17 | 0.647 |
| 18 | 18 | 0.32 |
| 19 | 19 | 0.298 |
| 2 | 2 | 0.118 |
| 20 | 20 | 0.377 |
| 21 | 21 | 0.741 |
| 22 | 22 | 0.604 |
| 23 | 23 | 0.78 |
| 24 | 24 | 0.928 |
| 25 | 25 | 0.885 |
| 26 | 26 | 0.519 |
| 27 | 27 | 0.264 |
| 28 | 28 | 0.613 |
| 29 | 29 | 0.412 |
| 3 | 3 | 0.249 |
| 30 | 30 | 0.473 |
| 31 | 31 | 0.462 |
| 32 | 32 | 0.00582 |
| 33 | 33 | 0.825 |
| 34 | 34 | 0.835 |
| 35 | 35 | 0.175 |
| 36 | 36 | 0.893 |
| 37 | 37 | 0.47 |
| 38 | 38 | 0.77 |
| 39 | 39 | 0.717 |
| 4 | 4 | 0.641 |
| 40 | 40 | 0.647 |
| 41 | 41 | 0.372 |
| 42 | 42 | 0.248 |
| 43 | 43 | 0.467 |
| 44 | 44 | 0.111 |
| 45 | 45 | 0.757 |
| 46 | 46 | 0.418 |
| 47 | 47 | 0.319 |
| 48 | 48 | 0.208 |
| 49 | 49 | 0.498 |
| 5 | 5 | 0.779 |
| 50 | 50 | 0.921 |
| 51 | 51 | 0.968 |
| 52 | 52 | 0.905 |
| 53 | 53 | 0.961 |
| 54 | 54 | 0.951 |
| 55 | 55 | 0.65 |
| 56 | 56 | 0.53 |
| 57 | 57 | 0.0981 |
| 58 | 58 | 0.657 |
| 59 | 59 | 0.818 |
| 6 | 6 | 0.647 |
| 60 | 60 | 0.867 |
| 61 | 61 | 0.638 |
| 62 | 62 | 0.934 |
| 63 | 63 | 0.301 |
| 64 | 64 | 0.47 |
| 65 | 65 | 0.629 |
| 66 | 66 | 0.789 |
| 67 | 67 | 0.619 |
| 68 | 68 | 0.756 |
| 69 | 69 | 0.202 |
| 7 | 7 | 0.814 |
| 70 | 70 | 0.308 |
| 71 | 71 | 0.516 |
| 72 | 72 | 0.287 |
| 73 | 73 | 0.111 |
| 74 | 74 | 0.0125 |
| 75 | 75 | 0.738 |
| 76 | 76 | 0.878 |
| 77 | 77 | 0.0681 |
| 78 | 78 | 0.914 |
| 79 | 79 | 0.4 |
| 8 | 8 | 0.103 |
| 80 | 80 | 0.393 |
| 81 | 81 | 0.293 |
| 82 | 82 | 0.812 |
| 83 | 83 | 0.939 |
| 84 | 84 | 0.269 |
| 85 | 85 | 0.841 |
| 86 | 86 | 0.0741 |
| 87 | 87 | 0.471 |
| 88 | 88 | 0.53 |
| 89 | 89 | 0.0593 |
| 9 | 9 | 0.649 |
| 90 | 90 | 0.321 |
| 91 | 91 | 1 |
| 92 | 92 | 0.521 |
| 93 | 93 | 0.583 |
| 94 | 94 | 0.957 |
| 95 | 95 | 0.0966 |
| 96 | 96 | 0.455 |
| 97 | 97 | 0.79 |
| 98 | 98 | 0.496 |
| 99 | 99 | 4.37843e-5 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12594
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0000261 mast cell- heparinase treated sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0000151 (secretory cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0002274 (histamine secreting cell)
0000219 (motile cell)
0000163 (endocrine cell)
0000457 (biogenic amine secreting cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000097 (mast cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000260 (mast cell sample)
0000261 (mast cell- heparinase treated sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)
