FFCP PHASE1:Hg19::chr8:129061678..129061731,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:129061678..129061731,+ | |||
|coexpression_cluster_id=C1299 | |coexpression_cluster_id=C1299 | ||
|description=CAGE_peak_at_chr8:129061678..129061731,+ | |description=CAGE_peak_at_chr8:129061678..129061731,+ | ||
|id=chr8:129061678..129061731,+ | |id=chr8:129061678..129061731,+ | ||
|ontology_enrichment_celltype=CL:0000766;1.76e-23;69!CL:0000860;8.23e-23;33!CL:0002057;8.23e-23;33!CL:0000576;5.06e-21;48!CL:0000763;7.69e-19;100!CL:0000473;8.38e-17;39!CL:0000234;8.38e-17;39!CL:0000097;1.24e-15;5!CL:0002393;3.30e-13;6!CL:0002397;3.30e-13;6!CL:0000988;3.23e-10;177!CL:0000226;2.41e-09;3!CL:0000842;2.41e-09;3!CL:0000163;1.63e-08;9!CL:0000738;2.53e-08;136!CL:0002087;1.04e-07;104!CL:0000840;1.08e-07;5 | |ontology_enrichment_celltype=CL:0000763!4.53e-67!112;CL:0000049!4.53e-67!112;CL:0000037!2.49e-52!172;CL:0000566!2.49e-52!172;CL:0000988!3.86e-50!182;CL:0002032!6.17e-50!165;CL:0000837!6.17e-50!165;CL:0000766!2.43e-49!76;CL:0000839!2.36e-46!70;CL:0000557!4.15e-44!71;CL:0002009!5.18e-39!65;CL:0002194!8.19e-39!63;CL:0000576!8.19e-39!63;CL:0000040!8.19e-39!63;CL:0000559!8.19e-39!63;CL:0002057!1.58e-37!42;CL:0000860!4.53e-34!45;CL:0000738!4.86e-34!140;CL:0002031!2.49e-30!124;CL:0002087!3.26e-26!119;CL:0000134!5.52e-13!358;CL:0002320!3.43e-12!365;CL:0002393!4.88e-12!9;CL:0002397!4.88e-12!9;CL:0000219!7.38e-10!390;CL:0002274!8.02e-08!5;CL:0000457!8.02e-08!5;CL:0002191!8.02e-08!5;CL:0000097!8.02e-08!5;CL:0000831!8.02e-08!5;CL:0002028!8.02e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000766;1.76e-23;69!CL:0000860;8.23e-23;33!CL:0002057;8.23e-23;33!CL:0000576;5.06e-21;48!CL:0000763;7.69e-19;100!CL:0000473;8.38e-17;39!CL:0000234;8.38e-17;39!CL:0000097;1.24e-15;5!CL:0002393;3.30e-13;6!CL:0002397;3.30e-13;6!CL:0000988;3.23e-10;177!CL:0000226;2.41e-09;3!CL:0000842;2.41e-09;3!CL:0000163;1.63e-08;9!CL:0000738;2.53e-08;136!CL:0002087;1.04e-07;104!CL:0000840;1.08e-07;5 | ||
|ontology_enrichment_disease=DOID:8692;1.06e-19;31!DOID:1036;9.06e-15;8!DOID:1240;1.04e-13;39!DOID:2531;4.51e-10;51!DOID:0060083;4.51e-10;51 | |ontology_enrichment_celltype_v019_2=CL:0000763,1.71e-64,108;CL:0000049,1.71e-64,108;CL:0000766,5.67e-47,72;CL:0000037,2.22e-46,168;CL:0000557,2.29e-45,67;CL:0000839,2.16e-43,66;CL:0000988,2.32e-43,177;CL:0002032,3.74e-43,161;CL:0000837,3.74e-43,161;CL:0002009,1.10e-35,61;CL:0000860,2.13e-35,42;CL:0002057,2.13e-35,42;CL:0002194,1.57e-34,59;CL:0000576,1.57e-34,59;CL:0000040,1.57e-34,59;CL:0000559,1.57e-34,59;CL:0000473,6.71e-33,48;CL:0000234,6.71e-33,48;CL:0000738,1.08e-29,136;CL:0002031,1.14e-24,120;CL:0002087,5.35e-21,115;CL:0000134,8.40e-17,354;CL:0002320,3.25e-16,361;CL:0000097,1.27e-15,5;CL:0002028,1.27e-15,5;CL:0000219,3.79e-14,386;CL:0002393,3.76e-12,9;CL:0002397,3.76e-12,9;CL:0000048,1.26e-11,427;CL:0000034,1.39e-11,441;CL:0000723,2.81e-11,433;CL:0000226,4.73e-09,3;CL:0000842,4.73e-09,3;CL:0000163,1.64e-08,9;CL:0000840,9.36e-08,5;CL:0001029,9.36e-08,5 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;5.52e-23;42!CL:0000049;2.74e-14;108 | ||
|ontology_enrichment_disease=DOID:8692!3.96e-21!31;DOID:1240!1.24e-16!39;DOID:2531!3.89e-13!51;DOID:0060083!3.89e-13!51;DOID:1036!4.68e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.06e-19;31!DOID:1036;9.06e-15;8!DOID:1240;1.04e-13;39!DOID:2531;4.51e-10;51!DOID:0060083;4.51e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.48e-20,31;DOID:1240,3.30e-17,39;DOID:1036,9.01e-15,8;DOID:2531,5.21e-14,51;DOID:0060083,5.21e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.84e-39!102;UBERON:0003061!4.84e-39!102;UBERON:0002371!6.13e-37!80;UBERON:0002193!1.29e-34!112;UBERON:0001474!5.19e-33!86;UBERON:0002405!1.11e-26!115;UBERON:0004765!2.65e-25!101;UBERON:0001434!2.65e-25!101;UBERON:0003081!1.54e-19!216;UBERON:0002384!5.20e-12!375;UBERON:0002204!3.36e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.90e-39,76;UBERON:0002390,3.30e-36,98;UBERON:0003061,3.30e-36,98;UBERON:0001474,1.86e-35,82;UBERON:0002193,6.04e-32,108;UBERON:0004765,1.63e-31,90;UBERON:0002405,3.28e-30,93;UBERON:0001434,1.80e-27,100;UBERON:0003081,2.54e-17,203;UBERON:0002384,2.05e-15,371;UBERON:0002204,6.15e-13,167;UBERON:0000926,4.06e-08,315;UBERON:0004120,4.06e-08,315;UBERON:0006603,4.06e-08,315 | |||
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|short_description=p@chr8:129061678..129061731,+ | |short_description=p@chr8:129061678..129061731,+ | ||
}} | }} |
Latest revision as of 14:59, 31 July 2015
Short description: | p@chr8:129061678..129061731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:129061678..129061731, + |
Coexpression cluster: | C1299_chronic_acute_chorionic_leukemia_choriocarcinoma_pancreatic_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.90e-39 | 76 |
hematopoietic system | 3.30e-36 | 98 |
blood island | 3.30e-36 | 98 |
bone element | 1.86e-35 | 82 |
hemolymphoid system | 6.04e-32 | 108 |
skeletal element | 1.63e-31 | 90 |
immune system | 3.28e-30 | 93 |
skeletal system | 1.80e-27 | 100 |
lateral plate mesoderm | 2.54e-17 | 203 |
connective tissue | 2.05e-15 | 371 |
musculoskeletal system | 6.15e-13 | 167 |
mesoderm | 4.06e-08 | 315 |
mesoderm-derived structure | 4.06e-08 | 315 |
presumptive mesoderm | 4.06e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.48e-20 | 31 |
leukemia | 3.30e-17 | 39 |
chronic leukemia | 9.01e-15 | 8 |
hematologic cancer | 5.21e-14 | 51 |
immune system cancer | 5.21e-14 | 51 |