FFCP PHASE1:Hg19::chr1:153917700..153917766,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:153917700..153917766,-
|short_description=p1@DENND4B
|description=CAGE_peak_1_at_DENND4B_5end
|association_with_transcript=0bp_to_ENST00000368646_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9909 | |EntrezGene=9909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29044 | |HGNC=29044 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAK5 | |UniProt=E9PAK5 | ||
|association_with_transcript=0bp_to_ENST00000368646_5end | |||
|cluster_id=chr1:153917700..153917766,- | |||
|coexpression_cluster_id=C1172 | |||
|description=CAGE_peak_1_at_DENND4B_5end | |||
|id=chr1:153917700..153917766,- | |||
|ontology_enrichment_celltype=CL:0000037!1.09e-79!172;CL:0000566!1.09e-79!172;CL:0000988!1.36e-75!182;CL:0002032!2.47e-75!165;CL:0000837!2.47e-75!165;CL:0000738!7.50e-70!140;CL:0002031!1.43e-58!124;CL:0002087!2.74e-58!119;CL:0000763!1.83e-47!112;CL:0000049!1.83e-47!112;CL:0000766!9.45e-39!76;CL:0000557!2.19e-34!71;CL:0000839!7.82e-33!70;CL:0002009!1.10e-31!65;CL:0002194!5.53e-31!63;CL:0000576!5.53e-31!63;CL:0000040!5.53e-31!63;CL:0000559!5.53e-31!63;CL:0002057!4.50e-28!42;CL:0000860!1.44e-24!45;CL:0000542!2.73e-23!53;CL:0000051!2.73e-23!53;CL:0000838!6.65e-23!52;CL:0000134!1.72e-11!358;CL:0000084!2.72e-11!25;CL:0000827!2.72e-11!25;CL:0000945!3.67e-11!24;CL:0000826!3.67e-11!24;CL:0002320!3.14e-10!365;CL:0000791!3.29e-10!18;CL:0000789!3.29e-10!18;CL:0002420!3.29e-10!18;CL:0002419!3.29e-10!18;CL:0000790!3.29e-10!18;CL:0000236!2.54e-08!14;CL:0002393!4.00e-08!9;CL:0002397!4.00e-08!9;CL:0000625!1.81e-07!11;CL:0000094!6.61e-07!8;CL:0000219!7.51e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.03e-22;48!CL:0000860;5.49e-22;33!CL:0002057;5.49e-22;33!CL:0000473;8.11e-22;39!CL:0000234;8.11e-22;39!CL:0000766;2.01e-20;69!CL:0002087;1.38e-18;104!CL:0000738;2.77e-17;136!CL:0000763;2.90e-16;100!CL:0000542;4.69e-15;53!CL:0000988;1.17e-14;177!CL:0000084;9.92e-13;25!CL:0000945;8.02e-12;24!CL:0000791;1.90e-11;18!CL:0000789;1.90e-11;18!CL:0002419;1.90e-11;18!CL:0000236;1.96e-08;13!CL:0000625;2.82e-08;11!CL:0000094;1.24e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.41e-89,168;CL:0000988,3.06e-85,177;CL:0002032,2.04e-84,161;CL:0000837,2.04e-84,161;CL:0000738,1.74e-83,136;CL:0002087,2.60e-70,115;CL:0002031,1.05e-68,120;CL:0000763,1.17e-53,108;CL:0000049,1.17e-53,108;CL:0000766,3.78e-49,72;CL:0000557,5.31e-44,67;CL:0002009,5.74e-41,61;CL:0000839,2.50e-40,66;CL:0002194,3.28e-40,59;CL:0000576,3.28e-40,59;CL:0000040,3.28e-40,59;CL:0000559,3.28e-40,59;CL:0000473,9.55e-36,48;CL:0000234,9.55e-36,48;CL:0000860,1.07e-31,42;CL:0002057,1.07e-31,42;CL:0000542,1.50e-25,53;CL:0000051,1.50e-25,53;CL:0000838,4.13e-25,52;CL:0000134,1.31e-13,354;CL:0000084,1.29e-12,25;CL:0000827,1.29e-12,25;CL:0002320,2.02e-12,361;CL:0000945,8.72e-12,24;CL:0000826,8.72e-12,24;CL:0000791,2.20e-11,18;CL:0000789,2.20e-11,18;CL:0002420,2.20e-11,18;CL:0002419,2.20e-11,18;CL:0000790,2.20e-11,18;CL:0002393,5.10e-09,9;CL:0002397,5.10e-09,9;CL:0000219,1.04e-08,386;CL:0000236,1.68e-08,14;CL:0000625,2.83e-08,11;CL:0000094,1.23e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.94e-23;42!CL:0000049;4.18e-15;108!CL:0000051;4.69e-15;53!CL:0000790;1.90e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!9.92e-12!51;DOID:0060083!9.92e-12!51;DOID:1240!1.10e-10!39;DOID:8692!6.37e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.32e-08;39!DOID:8692;1.33e-07;31!DOID:2531;9.42e-07;51!DOID:0060083;9.42e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.86e-11,51;DOID:0060083,5.86e-11,51;DOID:1240,6.30e-10,39;DOID:8692,6.16e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.60e-41!102;UBERON:0003061!3.60e-41!102;UBERON:0002193!4.61e-41!112;UBERON:0002371!7.82e-29!80;UBERON:0001474!1.56e-25!86;UBERON:0002405!5.07e-25!115;UBERON:0007023!2.82e-19!115;UBERON:0004765!2.84e-18!101;UBERON:0001434!2.84e-18!101;UBERON:0003081!4.80e-14!216;UBERON:0000178!1.66e-10!15;UBERON:0000179!1.66e-10!15;UBERON:0000463!1.66e-10!15;UBERON:0002384!3.87e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.61e-12;15!UBERON:0000179;9.61e-12;15!UBERON:0000463;9.61e-12;15!UBERON:0002390;1.25e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.66e-52,98;UBERON:0003061,4.66e-52,98;UBERON:0002193,2.97e-50,108;UBERON:0002405,3.51e-39,93;UBERON:0002371,1.19e-37,76;UBERON:0001474,1.29e-32,82;UBERON:0004765,4.87e-27,90;UBERON:0001434,1.81e-21,100;UBERON:0003081,1.31e-20,203;UBERON:0007023,1.04e-13,114;UBERON:0000178,1.01e-11,15;UBERON:0000179,1.01e-11,15;UBERON:0000463,1.01e-11,15;UBERON:0002384,2.99e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.55830144377054,7.30695246104517,7.08397031823113,41.6966133459838,27.2518872649021,28.9506150601062,0,0,0,9.6059328719574,5.40243083452202,4.9912074686924,41.5496556398908,38.3039894667971,38.4109241167058,46.7983341161442,33.3610475999549,49.712084553398,50.1623923789498,37.7875943688809,39.0560338512384,55.3181107835529,33.7157668177897,42.7394791835243,37.1123186095574,34.0693739683704,28.8508320464074,32.7508396699788,21.3009945582663,25.7310324529249,53.4608244300997,45.5753270596602,32.1354582756471,48.0551711022317,43.0044896281965,26.8521592835597,34.6343865196052,40.6905861548129,28.9832830362232,35.9859455899444,25.5323351111013,18.6846674698673,39.194791780052,22.9452484104889,26.9314167434345,25.4267791106015,20.2552699793161,23.7346790580663,51.1237792874899,46.1351330924144,50.3180749220102,50.5478840159228,45.9541292095009,43.2351828215146,73.2482751415009,52.1161694261616,54.2512536680963,29.9193615584249,40.4142572333977,36.4698794084057,30.297845802222,40.4399946906373,40.8074232367683,38.340602621522,41.978365199556,36.9988429921141,33.4725197941435,30.9641314781435,7.93027971474155,9.52864557068611,6.05783394982677,23.9985919538876,24.3666672904482,26.1113903729377,42.1309968384509,13.3628129319772,31.2475551784924,13.6378709885538,24.5103005147382,19.4439898933393,23.4825928258638,30.8716404692118,32.2790125708701,30.1737686338918,23.350182453722,21.831651405082,34.7763702882063,25.6535754270365,21.6708070752668,22.9978152370949,28.6672637024842,31.0408599817556,26.8029407476451,28.0851858141648,32.4936722610579,31.2520057851081,24.7117531556577,27.2540965530769,26.7492017312734,33.7312961691334,35.7533650586466,34.487375870684,27.8217305650131,28.0812205572683,24.1856754484274,0,0,0.12786256184353,0,0,0,0,0,0,0,0.43917392846563,4.06035134042909,0.364295288292542,0,43.4893507497276,43.7065640621161,36.9623130242445,21.4641561874808,24.5957811635455,15.9726725571713,1.78886166630035,0.860234595106124,2.42998351125316,0,2.09749718104953,1.37559020970034,2.29894463190492,1.55050055501597,2.49036383880697,0.66944122552934,2.81980521976403,3.04108842287405,4.88124115096339,1.47065232138347,0,1.3394959242612,0.898117490504679,1.35133776579987,0,1.89853131913626,2.19842092716489,35.5807127077371,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,1.00973509697646,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0.4115740113314,0,0,3.9313088667105,1.77236972004421,3.09024169590255,0,0,0.109750285408626,0,0,0,0,0,0,0,0,4.33099343283221,0.925971025153221,2.66355813128438,0,0,42.3493250470323,25.9744734304554,34.0365361641188,0,0,0,0,0,0,9.36060152002293,18.7543164448171,16.5862492432618,15.7090749224488,15.6540617448711,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.4871341923571,29.1309113030633,23.1917333431335,0,0,0,0,0,0,2.01753259188349,33.1011677139238,28.0315847317373,31.5723869248181,0,0,0,0.335032530668698,0,57.673540843933,59.832291840805,75.4236234453584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.319765093963,40.5542697539,40.343016849702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,1.13733384070897,2.2112181685947,0.863663664408557,1.54227252690289,0,0,0.254876273045038,0,0,0.877039506583738,0.784306353074702,0,0,0,6.28550171051106,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,2.16876448669825,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,6.59006605437454,0,0,0,0,48.7149704862883,49.7014184642544,56.3950715302421,55.7462354571226,60.0588918705844,46.6900784058756,45.3626407280016,49.1737609302448,0,0,0,12.6346159085489,6.78065300989291,2.20539714380084,3.34795172730527,6.58611925728295,10.5327953572802,28.1525865022764,4.22008522356922,16.2862363305806,6.61880569196257,3.91699739432558,20.0507581672054,6.43308755646092,11.0805771821553,12.5115818458449,13.2012333684001,8.93113896364988,18.4344458585075,14.0915947972222,15.0164227540718,14.458719059751,0.278406173895242,1.23087398947712,4.05683517713975,6.32836739195858,11.278960407028,0,12.1601788795672,0,9.58413104786314,0,0,0.890894042497916,0,0.994147647766298,2.2507106625682,0,2.63686198762815,0.211125408127993,3.18796781201712,18.2347384250557,0,0,12.431565351568,0.311039587661807,0,0,12.7893092556718,3.94573622547734,19.1586473877552,0,0.969332746095218,1.20598527610407,0,0,0,5.79999660347835,0,0,0,0,0,0,0.885741385813839,2.05013945663194,0,0.663475559587348,0.295547618953547,0.438770794307945,0,0,2.15460723810632,0,0.23056390438806,0,0.217294743844016,0.638002319463839,0.183195186803725,2.1321391040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| ||
|short_description=p1@DENND4B | |||
}} | }} |
Latest revision as of 07:40, 17 September 2015
Short description: | p1@DENND4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DENND4B_5end |
Coexpression cluster: | C1172_Neutrophils_Whole_CD14_CD14CD16_Eosinophils_CD19_Dendritic |
Association with transcript: | 0bp_to_ENST00000368646_5end |
EntrezGene: | DENND4B |
HGNC: | 29044 |
UniProt: | E9PAK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.66e-52 | 98 |
blood island | 4.66e-52 | 98 |
hemolymphoid system | 2.97e-50 | 108 |
immune system | 3.51e-39 | 93 |
bone marrow | 1.19e-37 | 76 |
bone element | 1.29e-32 | 82 |
skeletal element | 4.87e-27 | 90 |
skeletal system | 1.81e-21 | 100 |
lateral plate mesoderm | 1.31e-20 | 203 |
adult organism | 1.04e-13 | 114 |
blood | 1.01e-11 | 15 |
haemolymphatic fluid | 1.01e-11 | 15 |
organism substance | 1.01e-11 | 15 |
connective tissue | 2.99e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.86e-11 | 51 |
immune system cancer | 5.86e-11 | 51 |
leukemia | 6.30e-10 | 39 |
myeloid leukemia | 6.16e-08 | 31 |