FFCP PHASE1:Hg19::chr19:12903672..12903694,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_CU678639,CU679368_5end | |association_with_transcript=-44bp_to_CU678639,CU679368_5end | ||
|cluster_id=chr19:12903672..12903694,- | |||
|description=CAGE_peak_4_at_CU678639_5end,CAGE_peak_4_at_CU679368_5end | |description=CAGE_peak_4_at_CU678639_5end,CAGE_peak_4_at_CU679368_5end | ||
|id=chr19:12903672..12903694,- | |id=chr19:12903672..12903694,- | ||
|ontology_enrichment_celltype=CL:0002057!2.99e-16!42;CL:0000860!1.41e-15!45;CL:0000738!5.81e-14!140;CL:0000766!2.13e-13!76;CL:0002087!2.45e-13!119;CL:0002031!5.10e-13!124;CL:0000557!8.32e-13!71;CL:0002009!1.60e-12!65;CL:0002194!7.55e-12!63;CL:0000576!7.55e-12!63;CL:0000040!7.55e-12!63;CL:0000559!7.55e-12!63;CL:0000839!1.13e-11!70;CL:0000988!2.89e-09!182;CL:0000037!7.99e-09!172;CL:0000566!7.99e-09!172;CL:0002032!1.07e-08!165;CL:0000837!1.07e-08!165;CL:0000763!4.88e-07!112;CL:0000049!4.88e-07!112 | |ontology_enrichment_celltype=CL:0002057!2.99e-16!42;CL:0000860!1.41e-15!45;CL:0000738!5.81e-14!140;CL:0000766!2.13e-13!76;CL:0002087!2.45e-13!119;CL:0002031!5.10e-13!124;CL:0000557!8.32e-13!71;CL:0002009!1.60e-12!65;CL:0002194!7.55e-12!63;CL:0000576!7.55e-12!63;CL:0000040!7.55e-12!63;CL:0000559!7.55e-12!63;CL:0000839!1.13e-11!70;CL:0000988!2.89e-09!182;CL:0000037!7.99e-09!172;CL:0000566!7.99e-09!172;CL:0002032!1.07e-08!165;CL:0000837!1.07e-08!165;CL:0000763!4.88e-07!112;CL:0000049!4.88e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000624;3.94e-11;6!CL:0000226;9.27e-09;3!CL:0000842;9.27e-09;3!CL:0000473;1.57e-08;39!CL:0000234;1.57e-08;39!CL:0000898;1.80e-08;3!CL:0000791;2.58e-08;18!CL:0000789;2.58e-08;18!CL:0002419;2.58e-08;18!CL:0000623;3.30e-08;3!CL:0000576;1.07e-07;48!CL:0000860;4.04e-07;33!CL:0002057;4.04e-07;33!CL:0000766;5.41e-07;69!CL:0000084;5.93e-07;25!CL:0002393;9.73e-07;6!CL:0002397;9.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.35e-21,136;CL:0002087,5.90e-20,115;CL:0002031,2.88e-17,120;CL:0000988,1.14e-15,177;CL:0000473,2.50e-15,48;CL:0000234,2.50e-15,48;CL:0000037,3.40e-15,168;CL:0000766,2.34e-14,72;CL:0002032,3.03e-13,161;CL:0000837,3.03e-13,161;CL:0000860,2.19e-12,42;CL:0002057,2.19e-12,42;CL:0000839,6.75e-12,66;CL:0000557,1.22e-11,67;CL:0002194,3.13e-11,59;CL:0000576,3.13e-11,59;CL:0000040,3.13e-11,59;CL:0000559,3.13e-11,59;CL:0000624,5.11e-11,6;CL:0002009,1.05e-10,61;CL:0000623,1.20e-08,3;CL:0000825,1.20e-08,3;CL:0000226,1.76e-08,3;CL:0000842,1.76e-08,3;CL:0002320,2.45e-08,361;CL:0000898,2.70e-08,3;CL:0000791,2.87e-08,18;CL:0000789,2.87e-08,18;CL:0002420,2.87e-08,18;CL:0002419,2.87e-08,18;CL:0000790,2.87e-08,18;CL:0000763,1.43e-07,108;CL:0000049,1.43e-07,108;CL:0000084,5.84e-07,25;CL:0000827,5.84e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;8.81e-09;42!CL:0000790;2.58e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.94e-17!102;UBERON:0003061!2.94e-17!102;UBERON:0002193!1.34e-15!112;UBERON:0002371!1.11e-12!80;UBERON:0001474!3.91e-11!86;UBERON:0004765!6.21e-10!101;UBERON:0001434!6.21e-10!101;UBERON:0002405!2.79e-08!115;UBERON:0003081!7.96e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.94e-17!102;UBERON:0003061!2.94e-17!102;UBERON:0002193!1.34e-15!112;UBERON:0002371!1.11e-12!80;UBERON:0001474!3.91e-11!86;UBERON:0004765!6.21e-10!101;UBERON:0001434!6.21e-10!101;UBERON:0002405!2.79e-08!115;UBERON:0003081!7.96e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.07e-10;8!UBERON:0000982;1.07e-10;8!UBERON:0004770;1.07e-10;8!UBERON:0011135;4.30e-08;5!UBERON:0002216;4.30e-08;5!UBERON:0011134;4.30e-08;5!UBERON:0002209;4.30e-08;5!UBERON:0002213;4.30e-08;5!UBERON:0007844;4.30e-08;5!UBERON:0011138;4.30e-08;5!UBERON:0001130;4.30e-08;5!UBERON:0001066;4.30e-08;5!UBERON:0001468;4.30e-08;5!UBERON:0000178;1.79e-07;15!UBERON:0000179;1.79e-07;15!UBERON:0000463;1.79e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.51e-15,98;UBERON:0003061,1.51e-15,98;UBERON:0002193,1.70e-14,108;UBERON:0001434,6.34e-14,100;UBERON:0004765,1.19e-13,90;UBERON:0004905,8.20e-11,8;UBERON:0000982,8.20e-11,8;UBERON:0004770,8.20e-11,8;UBERON:0002371,8.90e-11,76;UBERON:0001474,9.11e-11,82;UBERON:0002405,1.29e-09,93;UBERON:0011135,5.23e-08,5;UBERON:0002216,5.23e-08,5;UBERON:0011134,5.23e-08,5;UBERON:0002209,5.23e-08,5;UBERON:0002213,5.23e-08,5;UBERON:0005856,5.23e-08,5;UBERON:0005866,5.23e-08,5;UBERON:0005863,5.23e-08,5;UBERON:0007844,5.23e-08,5;UBERON:0011138,5.23e-08,5;UBERON:0001130,5.23e-08,5;UBERON:0001066,5.23e-08,5;UBERON:0001468,5.23e-08,5;UBERON:0002384,9.19e-08,371;UBERON:0000178,1.81e-07,15;UBERON:0000179,1.81e-07,15;UBERON:0000463,1.81e-07,15;UBERON:0002204,9.73e-07,167 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0,1.11389717664042,1.65698687863958,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.393364276848904,0,1.54816123316076,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0.601633342410425,1.30206522429511,0.447830948479849,0,0,0.872389432677388,0.377875943688809,0.485168122375632,1.16214518452842,0,1.23882548358041,1.1507695692886,0.768482119587302,0.709446689665756,0.689491361473237,0,0,0.752969358170419,0.818718450173537,1.12361742222542,0.612167784741805,0.641858054152187,2.55734850319616,0,0.797854630486527,0.852449501065388,1.7412554317715,0.56738522469114,1.24564449799115,1.50749199154046,1.0429658368404,0.217188844705117,1.81619850790011,0.368277635987565,0.632924774881769,1.47878700418359,2.76385589954557,0.838634582033504,4.04383072127382,3.60424542819615,0.803627933485401,0.570025487482497,1.19350006319454,0.91332076882317,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,1.76171156811282,2.6759125968766,0,0,0,0.590129310341499,2.75107533924415,5.96244347098577,0,2.28145586643513,0.946895611469467,0,0.334231370655521,2.65145316727353,1.99380505125259,2.16643091012012,0.640456598628376,0.910415432919148,0.164437904603676,0.276350017785848,0,3.70716407905151,1.07016331235885,2.09071047609954,0,1.14966148080576,0.34362744548263,1.77113784413652,0.318565414324097,0,0,0.150575119077773,0,0,0,0,2.82249440514625,2.40696176205157,3.18613688542158,0,1.34140171940727,0.895037932904712,0.361439152384566,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0,0,0,0,1.25849830862972,0,0,0,0,0,0.805658634218294,0.760272105718513,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0.993943903390637,0.25326102332916,0.662045904066094,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0.624320153660641,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0.375355559615893,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0.545492241181669,0,0,0,0,0.207322110030741,0,0,0,0,0,1.39310378409594,2.88751792667834,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.329250856225877,0,0.502644862058154,0,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0.288732895522148,1.38895653772983,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0.268675568108545,0.871901815541886,0.383382679165211,0,0.088048434013226,1.24396869324463,0.720599767084807,1.2624243342638,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,0,0.771622122786426,0,0,1.14382394926518,0,0,0.325736184293735,0,0,0,0,0.199945982364114,8.51366464488333,1.50677127429638,10.5416969741516,0,0,0,0,0,0,0,1.77327684181734,1.94064817373566,3.20857590699371,0,0,0,0.335032530668698,0.637938751653163,3.74503511973591,0,0.828831026872071,0.12269149171914,2.00068208423871,1.35632511849868,0,0.892144943985809,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0.195801157462741,1.02943027143257,1.03384013061444,4.31428401637234,3.62873696531711,0.303127571446259,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0.887808626565635,0.246381468041427,0,0.232420756919918,0.120859449591622,0,0.184161977871793,0.229628896329213,0.182091168006717,0.524497659837696,0,0.385076685522074,0.784349769176855,0,0.422206515571503,0,0,0,1.54227252690289,0,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0.511795582622668,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,2.53329162357197,1.97576935775941,0,0.349934720244983,0.0962221127255121,0.670302275535787,0,0.282431402330337,0.43050537267123,0,0.886860307073351,0.229723400206959,0,0.764637207142375,1.70894156152249,0.238231775457789,0.411362273086194,1.94541993357815,0,0.79312517629427,0.106824071127473,0,1.22520107990516,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0,0,0.338583555603207,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0.242721043499027,0.334330152832435,0,0.71623345421307,0,0.307160702099232,0,0.140669416410513,0.222617410045812,0.659215496907038,0,1.79323189425963,0.276283915531148,0,0.20453736500431,0,0,0.1797367022946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| ||
|short_description=p4@CU678639,p4@CU679368 | |short_description=p4@CU678639,p4@CU679368 | ||
}} | }} |
Latest revision as of 03:48, 26 July 2015
Short description: | p4@CU678639, p4@CU679368 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CU678639_5end, CAGE_peak_4_at_CU679368_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_CU678639, CU679368_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.51e-15 | 98 |
blood island | 1.51e-15 | 98 |
hemolymphoid system | 1.70e-14 | 108 |
skeletal system | 6.34e-14 | 100 |
skeletal element | 1.19e-13 | 90 |
articulation | 8.20e-11 | 8 |
skeletal joint | 8.20e-11 | 8 |
articular system | 8.20e-11 | 8 |
bone marrow | 8.90e-11 | 76 |
bone element | 9.11e-11 | 82 |
immune system | 1.29e-09 | 93 |
intervertebral cartilage | 5.23e-08 | 5 |
symphysis | 5.23e-08 | 5 |
nonsynovial joint | 5.23e-08 | 5 |
fibrous joint | 5.23e-08 | 5 |
cartilaginous joint | 5.23e-08 | 5 |
developing mesenchymal condensation | 5.23e-08 | 5 |
pre-cartilage condensation | 5.23e-08 | 5 |
cartilaginous condensation | 5.23e-08 | 5 |
cartilage element | 5.23e-08 | 5 |
post-cranial axial skeletal system | 5.23e-08 | 5 |
vertebral column | 5.23e-08 | 5 |
intervertebral disk | 5.23e-08 | 5 |
intervertebral joint | 5.23e-08 | 5 |
connective tissue | 9.19e-08 | 371 |
blood | 1.81e-07 | 15 |
haemolymphatic fluid | 1.81e-07 | 15 |
organism substance | 1.81e-07 | 15 |
musculoskeletal system | 9.73e-07 | 167 |