FFCP PHASE1:Hg19::chr1:75602768..75602785,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:75602768..75602785,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_at_chr1:75602768..75602785,+ | |description=CAGE_peak_at_chr1:75602768..75602785,+ | ||
|id=chr1:75602768..75602785,+ | |id=chr1:75602768..75602785,+ | ||
|ontology_enrichment_celltype=CL:0002556!5.76e-50!6;CL:0002552!5.26e-27!5;CL:0000057!1.28e-09!75 | |ontology_enrichment_celltype=CL:0002556!5.76e-50!6;CL:0002552!5.26e-27!5;CL:0000057!1.28e-09!75 | ||
|ontology_enrichment_celltype_v019=CL:0002556;7.13e-20;6!CL:0002552;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,5.89e-20,6;CL:0002552,5.70e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.37e-29;1!UBERON:0003852;2.37e-29;1!UBERON:0005062;2.26e-08;4!UBERON:0007284;2.26e-08;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!5.76e-50!6;UBERON:0003672!5.76e-50!6;UBERON:0003129!8.74e-37!11;UBERON:0000075!4.98e-31!13;UBERON:0005944!4.98e-31!13;UBERON:0004288!4.98e-31!13;UBERON:0003089!4.98e-31!13;UBERON:0000165!2.29e-28!28;UBERON:0000930!2.29e-28!28;UBERON:0001444!4.61e-23!48;UBERON:0001828!5.49e-17!8;UBERON:0000078!2.02e-16!18;UBERON:0000033!1.94e-12!123;UBERON:0000153!9.55e-12!129;UBERON:0007811!9.55e-12!129;UBERON:0003102!1.20e-10!95;UBERON:0005705!6.31e-10!1;UBERON:0008193!6.31e-10!1;UBERON:0002514!6.31e-10!1;UBERON:0003462!6.31e-10!1;UBERON:0008001!6.31e-10!1;UBERON:0007914!6.31e-10!1;UBERON:0003457!6.31e-10!1;UBERON:0009292!6.31e-10!1;UBERON:0007375!6.31e-10!1;UBERON:0003323!6.31e-10!1;UBERON:0002397!6.31e-10!1;UBERON:0001709!6.31e-10!1;UBERON:0004066!6.31e-10!1;UBERON:0002244!6.31e-10!1;UBERON:0005620!6.31e-10!1;UBERON:0004068!6.31e-10!1;UBERON:0004362!6.31e-10!1;UBERON:0001282!8.17e-10!1;UBERON:0009842!8.17e-10!1;UBERON:0003704!8.17e-10!1;UBERON:0001171!8.17e-10!1;UBERON:0001172!8.17e-10!1;UBERON:0002146!1.36e-09!1;UBERON:0005623!1.36e-09!1;UBERON:0004121!1.37e-09!169;UBERON:0000924!2.62e-09!173;UBERON:0006601!2.62e-09!173;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1 | |ontology_enrichment_uberon=UBERON:0001758!5.76e-50!6;UBERON:0003672!5.76e-50!6;UBERON:0003129!8.74e-37!11;UBERON:0000075!4.98e-31!13;UBERON:0005944!4.98e-31!13;UBERON:0004288!4.98e-31!13;UBERON:0003089!4.98e-31!13;UBERON:0000165!2.29e-28!28;UBERON:0000930!2.29e-28!28;UBERON:0001444!4.61e-23!48;UBERON:0001828!5.49e-17!8;UBERON:0000078!2.02e-16!18;UBERON:0000033!1.94e-12!123;UBERON:0000153!9.55e-12!129;UBERON:0007811!9.55e-12!129;UBERON:0003102!1.20e-10!95;UBERON:0005705!6.31e-10!1;UBERON:0008193!6.31e-10!1;UBERON:0002514!6.31e-10!1;UBERON:0003462!6.31e-10!1;UBERON:0008001!6.31e-10!1;UBERON:0007914!6.31e-10!1;UBERON:0003457!6.31e-10!1;UBERON:0009292!6.31e-10!1;UBERON:0007375!6.31e-10!1;UBERON:0003323!6.31e-10!1;UBERON:0002397!6.31e-10!1;UBERON:0001709!6.31e-10!1;UBERON:0004066!6.31e-10!1;UBERON:0002244!6.31e-10!1;UBERON:0005620!6.31e-10!1;UBERON:0004068!6.31e-10!1;UBERON:0004362!6.31e-10!1;UBERON:0001282!8.17e-10!1;UBERON:0009842!8.17e-10!1;UBERON:0003704!8.17e-10!1;UBERON:0001171!8.17e-10!1;UBERON:0001172!8.17e-10!1;UBERON:0002146!1.36e-09!1;UBERON:0005623!1.36e-09!1;UBERON:0004121!1.37e-09!169;UBERON:0000924!2.62e-09!173;UBERON:0006601!2.62e-09!173;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0005705;2.37e-29;1!UBERON:0008193;2.37e-29;1!UBERON:0010912;2.37e-29;1!UBERON:0002514;2.37e-29;1!UBERON:0003457;2.37e-29;1!UBERON:0008907;2.37e-29;1!UBERON:0008001;2.37e-29;1!UBERON:0007213;2.37e-29;1!UBERON:0009891;2.37e-29;1!UBERON:0007914;2.37e-29;1!UBERON:0007375;2.37e-29;1!UBERON:0003323;2.37e-29;1!UBERON:0010258;2.37e-29;1!UBERON:0005253;2.37e-29;1!UBERON:0007842;2.37e-29;1!UBERON:0002397;2.37e-29;1!UBERON:0003113;2.37e-29;1!UBERON:0003277;2.37e-29;1!UBERON:0001709;2.37e-29;1!UBERON:0002244;2.37e-29;1!UBERON:0005620;2.37e-29;1!UBERON:0010364;2.37e-29;1!UBERON:0004288;2.37e-29;1!UBERON:0011137;8.34e-24;11!UBERON:0010323;8.34e-24;11!UBERON:0001758;7.13e-20;6!UBERON:0003672;7.13e-20;6!UBERON:0003129;3.42e-17;7!UBERON:0000075;1.25e-16;16!UBERON:0004089;2.05e-15;2!UBERON:0000165;8.04e-10;28!UBERON:0001708;2.26e-08;4!UBERON:0008895;2.26e-08;4!UBERON:0000153;1.18e-07;54!UBERON:0000033;3.19e-07;50!UBERON:0001434;5.96e-07;36!UBERON:0001872;6.04e-07;5!UBERON:0011159;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005705,4.20e-29,1;UBERON:0008193,4.20e-29,1;UBERON:0010912,4.20e-29,1;UBERON:0002514,4.20e-29,1;UBERON:0003457,4.20e-29,1;UBERON:0008907,4.20e-29,1;UBERON:0008001,4.20e-29,1;UBERON:0007213,4.20e-29,1;UBERON:0009891,4.20e-29,1;UBERON:0007914,4.20e-29,1;UBERON:0009292,4.20e-29,1;UBERON:0003099,4.20e-29,1;UBERON:0007375,4.20e-29,1;UBERON:0003323,4.20e-29,1;UBERON:0010258,4.20e-29,1;UBERON:0007842,4.20e-29,1;UBERON:0009494,4.20e-29,1;UBERON:0010042,4.20e-29,1;UBERON:0010045,4.20e-29,1;UBERON:0010259,4.20e-29,1;UBERON:0010359,4.20e-29,1;UBERON:0009526,4.20e-29,1;UBERON:0002397,4.20e-29,1;UBERON:0003113,4.20e-29,1;UBERON:0003277,4.20e-29,1;UBERON:0001709,4.20e-29,1;UBERON:0004066,4.20e-29,1;UBERON:0002244,4.20e-29,1;UBERON:0005620,4.20e-29,1;UBERON:0004362,4.20e-29,1;UBERON:0010364,4.20e-29,1;UBERON:0010046,4.20e-29,1;UBERON:0005868,4.20e-29,1;UBERON:0007238,4.20e-29,1;UBERON:0004288,4.20e-29,1;UBERON:0004068,4.20e-29,1;UBERON:0010334,4.20e-29,1;UBERON:0003852,4.20e-29,1;UBERON:0010253,4.20e-29,1;UBERON:0010323,8.35e-24,11;UBERON:0001758,5.89e-20,6;UBERON:0003672,5.89e-20,6;UBERON:0011137,6.89e-19,14;UBERON:0003129,2.90e-17,7;UBERON:0000075,1.25e-16,16;UBERON:0000165,4.15e-16,29;UBERON:0000930,4.15e-16,29;UBERON:0005253,2.74e-15,2;UBERON:0004089,2.74e-15,2;UBERON:0001444,9.61e-10,49;UBERON:0000033,1.40e-08,56;UBERON:0001708,2.61e-08,4;UBERON:0008895,2.61e-08,4;UBERON:0000153,8.61e-08,62;UBERON:0007811,8.61e-08,62;UBERON:0001872,6.39e-07,5;UBERON:0011159,6.77e-07,5 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.61417158655884,0.206651562351531,0,1.23633464639278,0,0,0.168336113954066,0.375355559615893,0.277064115484183,1.31693286264251,2.14541457059314,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,1.19760786519031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9537629862636,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.61417158655884,0.206651562351531,0,1.23633464639278,0,0,0.168336113954066,0.375355559615893,0.277064115484183,1.31693286264251,2.14541457059314,0.45071417671979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,0,0,1.19760786519031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9537629862636,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05802783107205,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801652215796681,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:75602768..75602785,+ | |short_description=p@chr1:75602768..75602785,+ | ||
}} | }} |
Latest revision as of 10:19, 28 July 2015
Short description: | p@chr1:75602768..75602785, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:75602768..75602785, + |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 5.89e-20 | 6 |
fibroblast of gingiva | 5.70e-07 | 5 |