FFCP PHASE1:Hg19::chr10:43633941..43633960,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=7bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |association_with_transcript=7bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | ||
|cluster_id=chr10:43633941..43633960,+ | |||
|coexpression_cluster_id=C3017 | |coexpression_cluster_id=C3017 | ||
|description=CAGE_peak_3_at_CSGALNACT2_5end | |description=CAGE_peak_3_at_CSGALNACT2_5end | ||
|id=chr10:43633941..43633960,+ | |id=chr10:43633941..43633960,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.21e-33!140;CL:0000766!2.25e-31!76;CL:0000557!6.07e-28!71;CL:0002057!2.22e-27!42;CL:0002031!2.89e-26!124;CL:0000839!1.87e-25!70;CL:0002009!2.31e-25!65;CL:0000037!2.87e-25!172;CL:0000566!2.87e-25!172;CL:0002087!4.53e-25!119;CL:0002194!2.61e-24!63;CL:0000576!2.61e-24!63;CL:0000040!2.61e-24!63;CL:0000559!2.61e-24!63;CL:0000860!1.97e-23!45;CL:0000988!6.33e-23!182;CL:0002032!7.66e-23!165;CL:0000837!7.66e-23!165;CL:0000763!2.42e-20!112;CL:0000049!2.42e-20!112;CL:0000134!9.85e-18!358;CL:0002320!1.18e-16!365;CL:0000219!5.71e-14!390;CL:0000048!3.37e-13!430;CL:0000723!1.49e-12!436;CL:0000034!4.91e-12!444;CL:0000791!8.80e-08!18;CL:0000789!8.80e-08!18;CL:0002420!8.80e-08!18;CL:0002419!8.80e-08!18;CL:0000790!8.80e-08!18;CL:0000084!1.02e-07!25;CL:0000827!1.02e-07!25;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9 | |ontology_enrichment_celltype=CL:0000738!5.21e-33!140;CL:0000766!2.25e-31!76;CL:0000557!6.07e-28!71;CL:0002057!2.22e-27!42;CL:0002031!2.89e-26!124;CL:0000839!1.87e-25!70;CL:0002009!2.31e-25!65;CL:0000037!2.87e-25!172;CL:0000566!2.87e-25!172;CL:0002087!4.53e-25!119;CL:0002194!2.61e-24!63;CL:0000576!2.61e-24!63;CL:0000040!2.61e-24!63;CL:0000559!2.61e-24!63;CL:0000860!1.97e-23!45;CL:0000988!6.33e-23!182;CL:0002032!7.66e-23!165;CL:0000837!7.66e-23!165;CL:0000763!2.42e-20!112;CL:0000049!2.42e-20!112;CL:0000134!9.85e-18!358;CL:0002320!1.18e-16!365;CL:0000219!5.71e-14!390;CL:0000048!3.37e-13!430;CL:0000723!1.49e-12!436;CL:0000034!4.91e-12!444;CL:0000791!8.80e-08!18;CL:0000789!8.80e-08!18;CL:0002420!8.80e-08!18;CL:0002419!8.80e-08!18;CL:0000790!8.80e-08!18;CL:0000084!1.02e-07!25;CL:0000827!1.02e-07!25;CL:0002393!3.69e-07!9;CL:0002397!3.69e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.87e-22;33!CL:0002057;7.87e-22;33!CL:0000473;7.91e-20;39!CL:0000234;7.91e-20;39!CL:0000576;8.65e-18;48!CL:0000766;1.40e-16;69!CL:0002087;2.33e-09;104!CL:0000738;8.32e-09;136!CL:0000791;2.94e-08;18!CL:0000789;2.94e-08;18!CL:0002419;2.94e-08;18!CL:0000084;5.01e-08;25!CL:0000081;4.42e-07;11!CL:0000763;4.73e-07;100!CL:0000094;4.89e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.28e-38,136;CL:0000766,6.76e-38,72;CL:0000557,5.05e-34,67;CL:0000473,3.07e-31,48;CL:0000234,3.07e-31,48;CL:0002009,3.45e-31,61;CL:0000839,8.56e-31,66;CL:0002031,1.40e-30,120;CL:0002194,5.19e-30,59;CL:0000576,5.19e-30,59;CL:0000040,5.19e-30,59;CL:0000559,5.19e-30,59;CL:0000860,9.27e-30,42;CL:0002057,9.27e-30,42;CL:0002087,1.69e-29,115;CL:0000037,1.95e-29,168;CL:0000988,2.31e-28,177;CL:0002032,1.05e-26,161;CL:0000837,1.05e-26,161;CL:0000763,2.24e-24,108;CL:0000049,2.24e-24,108;CL:0000134,3.58e-21,354;CL:0002320,7.46e-20,361;CL:0000219,1.34e-16,386;CL:0000048,4.79e-15,427;CL:0000723,6.88e-14,433;CL:0000034,1.67e-13,441;CL:0000791,2.36e-08,18;CL:0000789,2.36e-08,18;CL:0002420,2.36e-08,18;CL:0002419,2.36e-08,18;CL:0000790,2.36e-08,18;CL:0000084,6.77e-08,25;CL:0000827,6.77e-08,25;CL:0002393,1.12e-07,9;CL:0002397,1.12e-07,9;CL:0000094,6.13e-07,8;CL:0000081,6.76e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.32e-22;42!CL:0000790;2.94e-08;18!CL:0000049;2.75e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.54e-30!102;UBERON:0003061!2.54e-30!102;UBERON:0002193!8.30e-26!112;UBERON:0002371!1.48e-25!80;UBERON:0001474!2.24e-25!86;UBERON:0004765!2.19e-24!101;UBERON:0001434!2.19e-24!101;UBERON:0002384!1.05e-16!375;UBERON:0002405!1.61e-14!115;UBERON:0002204!1.09e-13!167;UBERON:0003081!7.18e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.54e-30!102;UBERON:0003061!2.54e-30!102;UBERON:0002193!8.30e-26!112;UBERON:0002371!1.48e-25!80;UBERON:0001474!2.24e-25!86;UBERON:0004765!2.19e-24!101;UBERON:0001434!2.19e-24!101;UBERON:0002384!1.05e-16!375;UBERON:0002405!1.61e-14!115;UBERON:0002204!1.09e-13!167;UBERON:0003081!7.18e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p3@CSGALNACT2 | |short_description=p3@CSGALNACT2 | ||
}} | }} |
Latest revision as of 05:40, 18 September 2015
Short description: | p3@CSGALNACT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSGALNACT2_5end |
Coexpression cluster: | C3017_CD14_CD14CD16_Eosinophils_Mast_Neutrophils_Basophils_CD34 |
Association with transcript: | 7bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
EntrezGene: | CSGALNACT2 |
HGNC: | 24292 |
UniProt: | Q8N6G5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.58e-35 | 98 |
blood island | 2.58e-35 | 98 |
bone marrow | 9.85e-31 | 76 |
bone element | 2.73e-30 | 82 |
hemolymphoid system | 3.76e-30 | 108 |
skeletal element | 3.33e-28 | 90 |
immune system | 3.20e-26 | 93 |
skeletal system | 7.81e-26 | 100 |
connective tissue | 5.49e-20 | 371 |
musculoskeletal system | 6.13e-13 | 167 |
lateral plate mesoderm | 9.81e-12 | 203 |