FFCP PHASE1:Hg19::chr10:115614503..115614514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374354 | |EntrezGene=374354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24731 | |HGNC=24731 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-68bp_to_ENST00000468890_5end | |association_with_transcript=-68bp_to_ENST00000468890_5end | ||
|cluster_id=chr10:115614503..115614514,+ | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_4_at_NHLRC2_5end | |description=CAGE_peak_4_at_NHLRC2_5end | ||
|id=chr10:115614503..115614514,+ | |id=chr10:115614503..115614514,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002032;3.08e-12;1!CL:0000557;3.08e-12;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.48e-12;1!UBERON:0010226;1.48e-12;1!UBERON:0005062;2.40e-12;4!UBERON:0007284;2.40e-12;4!UBERON:0006603;8.63e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.34e-23;2!DOID:178;1.48e-12;1!DOID:326;1.48e-12;1!DOID:3978;1.48e-12;1!DOID:3394;1.48e-12;1!DOID:5844;1.48e-12;1!DOID:1287;2.68e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.13e-23,2;DOID:178,1.25e-12,1;DOID:326,1.25e-12,1;DOID:3978,1.25e-12,1;DOID:3394,1.25e-12,1;DOID:5844,1.25e-12,1;DOID:1287,2.47e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.25e-17!115 | |ontology_enrichment_uberon=UBERON:0007023!3.25e-17!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.07e-22;2!UBERON:0002757;1.07e-22;2!UBERON:0010134;1.07e-22;2!UBERON:0005408;1.07e-22;2!UBERON:0001899;1.07e-22;2!UBERON:0003978;3.83e-16;3!UBERON:0000946;3.83e-16;3!UBERON:0007100;5.80e-16;25!UBERON:0002146;8.84e-13;1!UBERON:0005623;8.84e-13;1!UBERON:0002135;1.05e-12;1!UBERON:0001389;1.05e-12;1!UBERON:0000026;1.05e-12;1!UBERON:0008784;1.05e-12;1!UBERON:0006058;1.05e-12;1!UBERON:0003663;1.05e-12;1!UBERON:0004256;1.05e-12;1!UBERON:0004708;1.05e-12;1!UBERON:0002101;1.05e-12;1!UBERON:0004709;1.05e-12;1!UBERON:0002529;1.05e-12;1!UBERON:0010538;1.05e-12;1!UBERON:0003661;1.05e-12;1!UBERON:0010890;1.05e-12;1!UBERON:0002471;1.05e-12;1!UBERON:0001383;1.05e-12;1!UBERON:0010758;1.05e-12;1!UBERON:0010707;1.05e-12;1!UBERON:0000978;1.05e-12;1!UBERON:0002103;1.05e-12;1!UBERON:0001665;1.05e-12;1!UBERON:0003823;1.05e-12;1!UBERON:0000154;1.05e-12;1!UBERON:0010709;1.05e-12;1!UBERON:0002084;1.48e-12;1!UBERON:0002082;1.48e-12;1!UBERON:0007195;3.08e-12;1!UBERON:0003296;7.52e-12;4!UBERON:0010133;7.52e-12;4!UBERON:0002784;7.52e-12;4!UBERON:0001894;3.79e-07;7!UBERON:0005090;5.57e-07;2!UBERON:0001630;5.57e-07;2!UBERON:0002133;5.57e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.19e-22,2;UBERON:0002757,1.19e-22,2;UBERON:0010134,1.19e-22,2;UBERON:0005408,1.19e-22,2;UBERON:0001899,1.19e-22,2;UBERON:0003978,3.69e-16,3;UBERON:0009751,3.69e-16,3;UBERON:0000946,3.69e-16,3;UBERON:0002523,3.69e-16,3;UBERON:0005983,3.69e-16,3;UBERON:0002165,3.69e-16,3;UBERON:0002062,3.69e-16,3;UBERON:0007280,3.69e-16,3;UBERON:0007100,8.81e-15,27;UBERON:0002146,8.85e-13,1;UBERON:0005623,8.85e-13,1;UBERON:0002135,9.92e-13,1;UBERON:0005418,1.11e-12,1;UBERON:0001389,1.11e-12,1;UBERON:0000026,1.11e-12,1;UBERON:0008784,1.11e-12,1;UBERON:0006058,1.11e-12,1;UBERON:0003663,1.11e-12,1;UBERON:0004256,1.11e-12,1;UBERON:0004708,1.11e-12,1;UBERON:0002101,1.11e-12,1;UBERON:0004709,1.11e-12,1;UBERON:0002529,1.11e-12,1;UBERON:0010538,1.11e-12,1;UBERON:0003661,1.11e-12,1;UBERON:0010890,1.11e-12,1;UBERON:0002471,1.11e-12,1;UBERON:0001383,1.11e-12,1;UBERON:0004357,1.11e-12,1;UBERON:0004347,1.11e-12,1;UBERON:0005420,1.11e-12,1;UBERON:0005732,1.11e-12,1;UBERON:0010758,1.11e-12,1;UBERON:0010707,1.11e-12,1;UBERON:0000978,1.11e-12,1;UBERON:0002103,1.11e-12,1;UBERON:0001665,1.11e-12,1;UBERON:0003823,1.11e-12,1;UBERON:0000154,1.11e-12,1;UBERON:0010709,1.11e-12,1;UBERON:0005733,1.11e-12,1;UBERON:0005730,1.11e-12,1;UBERON:0002084,1.40e-12,1;UBERON:0002082,1.40e-12,1;UBERON:0010226,1.40e-12,1;UBERON:0007023,2.09e-12,114;UBERON:0007195,3.45e-12,1;UBERON:0003296,7.95e-12,4;UBERON:0010133,7.95e-12,4;UBERON:0002784,7.95e-12,4;UBERON:0003103,1.70e-07,68;UBERON:0004797,1.96e-07,7;UBERON:0001894,3.91e-07,7;UBERON:0006222,3.91e-07,7;UBERON:0002133,5.41e-07,2;UBERON:0005090,5.73e-07,2;UBERON:0001630,5.73e-07,2 | |||
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|short_description=p4@NHLRC2 | |short_description=p4@NHLRC2 | ||
}} | }} |
Latest revision as of 12:10, 16 September 2015
Short description: | p4@NHLRC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NHLRC2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -68bp_to_ENST00000468890_5end |
EntrezGene: | NHLRC2 |
HGNC: | 24731 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.13e-23 | 2 |
vascular disease | 1.25e-12 | 1 |
ischemia | 1.25e-12 | 1 |
extrinsic cardiomyopathy | 1.25e-12 | 1 |
myocardial ischemia | 1.25e-12 | 1 |
myocardial infarction | 1.25e-12 | 1 |
cardiovascular system disease | 2.47e-12 | 4 |