FFCP PHASE1:Hg19::chr7:54610358..54610373,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222008 | |EntrezGene=222008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28499 | |HGNC=28499 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8J5 | |UniProt=F8W8J5 | ||
|association_with_transcript=60bp_to_ENST00000402613_5end | |association_with_transcript=60bp_to_ENST00000402613_5end | ||
|cluster_id=chr7:54610358..54610373,+ | |||
|description=CAGE_peak_15_at_VSTM2A_5end | |description=CAGE_peak_15_at_VSTM2A_5end | ||
|id=chr7:54610358..54610373,+ | |id=chr7:54610358..54610373,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;7.85e-11;10!UBERON:0006601;4.95e-10;82 | |ontology_enrichment_development_v019=UBERON:0006238;7.85e-11;10!UBERON:0006601;4.95e-10;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.63e-68!57;UBERON:0005068!3.63e-68!57;UBERON:0006241!3.63e-68!57;UBERON:0007135!3.63e-68!57;UBERON:0001017!6.37e-63!82;UBERON:0005743!1.37e-62!86;UBERON:0000073!7.18e-62!94;UBERON:0001016!7.18e-62!94;UBERON:0002780!4.10e-58!41;UBERON:0001890!4.10e-58!41;UBERON:0006240!4.10e-58!41;UBERON:0003080!1.38e-56!42;UBERON:0001893!2.29e-56!34;UBERON:0002020!2.35e-56!34;UBERON:0003528!2.35e-56!34;UBERON:0000955!8.72e-55!69;UBERON:0006238!8.72e-55!69;UBERON:0002616!1.44e-54!59;UBERON:0002791!2.95e-53!33;UBERON:0001869!4.59e-51!32;UBERON:0002619!8.83e-51!22;UBERON:0003075!1.74e-50!86;UBERON:0007284!1.74e-50!86;UBERON:0002346!7.78e-48!90;UBERON:0001950!8.11e-45!20;UBERON:0000956!2.49e-44!25;UBERON:0000203!2.49e-44!25;UBERON:0007023!1.34e-42!115;UBERON:0003056!1.06e-39!61;UBERON:0004121!8.07e-32!169;UBERON:0000924!7.55e-31!173;UBERON:0006601!7.55e-31!173;UBERON:0000033!1.13e-30!123;UBERON:0000153!7.89e-29!129;UBERON:0007811!7.89e-29!129;UBERON:0000200!2.21e-21!6;UBERON:0002021!2.09e-17!5;UBERON:0000025!2.55e-17!194;UBERON:0002298!3.48e-14!8;UBERON:0002308!2.65e-13!9;UBERON:0000125!2.65e-13!9;UBERON:0004111!5.21e-13!241;UBERON:0003076!9.35e-13!15;UBERON:0003057!9.35e-13!15;UBERON:0001872!5.32e-12!5;UBERON:0002771!3.33e-11!3;UBERON:0000349!4.01e-11!5;UBERON:0001871!1.03e-10!7;UBERON:0006331!1.59e-10!3;UBERON:0000988!1.87e-10!3;UBERON:0002240!2.14e-10!3;UBERON:0000477!2.98e-10!286;UBERON:0000064!1.04e-09!219;UBERON:0000483!1.64e-09!309;UBERON:0002420!2.26e-09!9;UBERON:0007245!2.26e-09!9;UBERON:0010009!2.26e-09!9;UBERON:0010011!2.26e-09!9;UBERON:0000454!2.26e-09!9;UBERON:0000119!2.50e-09!312;UBERON:0000475!3.33e-09!365;UBERON:0000369!1.00e-08!4;UBERON:0002435!1.00e-08!4;UBERON:0000204!1.00e-08!4;UBERON:0010082!1.00e-08!4;UBERON:0001870!2.63e-08!2;UBERON:0009663!3.92e-08!7;UBERON:0001897!7.26e-08!2;UBERON:0002148!8.62e-08!2;UBERON:0009662!8.62e-08!2;UBERON:0001954!1.02e-07!2;UBERON:0003022!1.02e-07!2;UBERON:0002421!1.02e-07!2;UBERON:0002600!1.02e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!3.63e-68!57;UBERON:0005068!3.63e-68!57;UBERON:0006241!3.63e-68!57;UBERON:0007135!3.63e-68!57;UBERON:0001017!6.37e-63!82;UBERON:0005743!1.37e-62!86;UBERON:0000073!7.18e-62!94;UBERON:0001016!7.18e-62!94;UBERON:0002780!4.10e-58!41;UBERON:0001890!4.10e-58!41;UBERON:0006240!4.10e-58!41;UBERON:0003080!1.38e-56!42;UBERON:0001893!2.29e-56!34;UBERON:0002020!2.35e-56!34;UBERON:0003528!2.35e-56!34;UBERON:0000955!8.72e-55!69;UBERON:0006238!8.72e-55!69;UBERON:0002616!1.44e-54!59;UBERON:0002791!2.95e-53!33;UBERON:0001869!4.59e-51!32;UBERON:0002619!8.83e-51!22;UBERON:0003075!1.74e-50!86;UBERON:0007284!1.74e-50!86;UBERON:0002346!7.78e-48!90;UBERON:0001950!8.11e-45!20;UBERON:0000956!2.49e-44!25;UBERON:0000203!2.49e-44!25;UBERON:0007023!1.34e-42!115;UBERON:0003056!1.06e-39!61;UBERON:0004121!8.07e-32!169;UBERON:0000924!7.55e-31!173;UBERON:0006601!7.55e-31!173;UBERON:0000033!1.13e-30!123;UBERON:0000153!7.89e-29!129;UBERON:0007811!7.89e-29!129;UBERON:0000200!2.21e-21!6;UBERON:0002021!2.09e-17!5;UBERON:0000025!2.55e-17!194;UBERON:0002298!3.48e-14!8;UBERON:0002308!2.65e-13!9;UBERON:0000125!2.65e-13!9;UBERON:0004111!5.21e-13!241;UBERON:0003076!9.35e-13!15;UBERON:0003057!9.35e-13!15;UBERON:0001872!5.32e-12!5;UBERON:0002771!3.33e-11!3;UBERON:0000349!4.01e-11!5;UBERON:0001871!1.03e-10!7;UBERON:0006331!1.59e-10!3;UBERON:0000988!1.87e-10!3;UBERON:0002240!2.14e-10!3;UBERON:0000477!2.98e-10!286;UBERON:0000064!1.04e-09!219;UBERON:0000483!1.64e-09!309;UBERON:0002420!2.26e-09!9;UBERON:0007245!2.26e-09!9;UBERON:0010009!2.26e-09!9;UBERON:0010011!2.26e-09!9;UBERON:0000454!2.26e-09!9;UBERON:0000119!2.50e-09!312;UBERON:0000475!3.33e-09!365;UBERON:0000369!1.00e-08!4;UBERON:0002435!1.00e-08!4;UBERON:0000204!1.00e-08!4;UBERON:0010082!1.00e-08!4;UBERON:0001870!2.63e-08!2;UBERON:0009663!3.92e-08!7;UBERON:0001897!7.26e-08!2;UBERON:0002148!8.62e-08!2;UBERON:0009662!8.62e-08!2;UBERON:0001954!1.02e-07!2;UBERON:0003022!1.02e-07!2;UBERON:0002421!1.02e-07!2;UBERON:0002600!1.02e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.68e-28;20!UBERON:0001869;4.22e-27;32!UBERON:0002619;8.43e-26;22!UBERON:0001893;2.51e-25;34!UBERON:0001872;4.51e-23;5!UBERON:0000956;9.01e-23;25!UBERON:0000203;9.01e-23;25!UBERON:0002791;5.30e-21;32!UBERON:0003528;7.73e-20;34!UBERON:0002020;7.73e-20;34!UBERON:0000200;3.97e-19;6!UBERON:0000955;5.77e-19;68!UBERON:0002780;2.87e-17;41!UBERON:0001890;2.87e-17;41!UBERON:0001017;2.99e-15;75!UBERON:0002581;1.04e-13;1!UBERON:0002902;1.04e-13;1!UBERON:0002022;1.04e-13;1!UBERON:0001874;1.04e-13;1!UBERON:0009899;1.04e-13;1!UBERON:0007190;1.04e-13;1!UBERON:0000073;9.36e-13;53!UBERON:0002616;9.36e-13;53!UBERON:0002021;7.50e-11;5!UBERON:0001016;1.51e-10;83!UBERON:0001897;1.70e-07;2!UBERON:0002702;1.70e-07;2!UBERON:0010225;1.70e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0001950;2.68e-28;20!UBERON:0001869;4.22e-27;32!UBERON:0002619;8.43e-26;22!UBERON:0001893;2.51e-25;34!UBERON:0001872;4.51e-23;5!UBERON:0000956;9.01e-23;25!UBERON:0000203;9.01e-23;25!UBERON:0002791;5.30e-21;32!UBERON:0003528;7.73e-20;34!UBERON:0002020;7.73e-20;34!UBERON:0000200;3.97e-19;6!UBERON:0000955;5.77e-19;68!UBERON:0002780;2.87e-17;41!UBERON:0001890;2.87e-17;41!UBERON:0001017;2.99e-15;75!UBERON:0002581;1.04e-13;1!UBERON:0002902;1.04e-13;1!UBERON:0002022;1.04e-13;1!UBERON:0001874;1.04e-13;1!UBERON:0009899;1.04e-13;1!UBERON:0007190;1.04e-13;1!UBERON:0000073;9.36e-13;53!UBERON:0002616;9.36e-13;53!UBERON:0002021;7.50e-11;5!UBERON:0001016;1.51e-10;83!UBERON:0001897;1.70e-07;2!UBERON:0002702;1.70e-07;2!UBERON:0010225;1.70e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.63e-29,32;UBERON:0001950,2.14e-28,20;UBERON:0000955,2.51e-28,68;UBERON:0006238,2.51e-28,68;UBERON:0002780,3.06e-28,41;UBERON:0001890,3.06e-28,41;UBERON:0003080,3.06e-28,41;UBERON:0006240,3.06e-28,41;UBERON:0001893,1.39e-27,34;UBERON:0002619,6.87e-26,22;UBERON:0001016,8.66e-25,89;UBERON:0001017,1.17e-23,81;UBERON:0002791,3.39e-23,32;UBERON:0001872,5.06e-23,5;UBERON:0000956,7.52e-23,25;UBERON:0000203,7.52e-23,25;UBERON:0003528,7.86e-22,34;UBERON:0002020,7.86e-22,34;UBERON:0000073,1.00e-21,53;UBERON:0002616,1.00e-21,53;UBERON:0001049,1.60e-20,56;UBERON:0005068,1.60e-20,56;UBERON:0006241,1.60e-20,56;UBERON:0007135,1.60e-20,56;UBERON:0000200,3.01e-19,6;UBERON:0003056,8.89e-19,61;UBERON:0007023,3.75e-14,114;UBERON:0002902,5.85e-14,1;UBERON:0009899,5.85e-14,1;UBERON:0002581,8.58e-14,1;UBERON:0003075,9.85e-14,82;UBERON:0007284,9.85e-14,82;UBERON:0007190,1.10e-13,1;UBERON:0002022,1.25e-13,1;UBERON:0001874,2.07e-13,1;UBERON:0002346,4.78e-13,86;UBERON:0004121,2.55e-12,171;UBERON:0000924,2.55e-12,171;UBERON:0006601,2.55e-12,171;UBERON:0002021,5.85e-11,5;UBERON:0010371,1.33e-10,104;UBERON:0011216,1.33e-10,223;UBERON:0010314,4.16e-08,132;UBERON:0002702,1.36e-07,2;UBERON:0001897,1.45e-07,2;UBERON:0010225,1.45e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.11321717794222,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0,0.964771509003264,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.625954653532499,0.573409195690071,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17420431216208,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.899209151350433,1.41696576325585,0.798169295285756,0.41023272848151,0.252071696221718,1.9364030689981,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,3.12431239445539,1.2401207790071,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.57854656550838,0,0,0,1.09980912941201,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,1.19370465096821,0,0,0,7.69910502190035,0,0,0,0,0.707029641304878,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.11321717794222,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0,0.964771509003264,0,0,0,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.823040347426423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.976210119215705,0.625954653532499,0.573409195690071,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17420431216208,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.899209151350433,1.41696576325585,0.798169295285756,0.41023272848151,0.252071696221718,1.9364030689981,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35075169236789,3.12431239445539,1.2401207790071,0.697573912132975,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,1.57854656550838,0,0,0,1.09980912941201,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0.233939463462106,1.19370465096821,0,0,0,7.69910502190035,0,0,0,0,0.707029641304878,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.883889372481891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p15@VSTM2A | |short_description=p15@VSTM2A | ||
}} | }} |
Latest revision as of 00:07, 19 September 2015
Short description: | p15@VSTM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_VSTM2A_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_ENST00000402613_5end |
EntrezGene: | VSTM2A |
HGNC: | 28499 |
UniProt: | F8W8J5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data