FFCP PHASE1:Hg19::chr8:80567211..80567218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11075 | |EntrezGene=11075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=10577 | |HGNC=10577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_AL110174_5end | |association_with_transcript=36bp_to_AL110174_5end | ||
|cluster_id=chr8:80567211..80567218,+ | |||
|coexpression_cluster_id=C552 | |coexpression_cluster_id=C552 | ||
|description=CAGE_peak_9_at_STMN2_5end | |description=CAGE_peak_9_at_STMN2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002617!4.98e-13!2 | |ontology_enrichment_celltype=CL:0002617!4.98e-13!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2 | |ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@STMN2 | |short_description=p9@STMN2 | ||
}} | }} |
Latest revision as of 03:56, 19 September 2015
Short description: | p9@STMN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STMN2_5end |
Coexpression cluster: | C552_medial_temporal_occipital_parietal_duodenum_brain_spinal |
Association with transcript: | 36bp_to_AL110174_5end |
EntrezGene: | STMN2 |
HGNC: | 10577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.44e-23 | 6 |
middle temporal gyrus | 3.11e-21 | 2 |
neocortex | 8.78e-18 | 20 |
regional part of cerebral cortex | 2.57e-16 | 22 |
cerebral cortex | 1.55e-14 | 25 |
pallium | 1.55e-14 | 25 |
duodenum | 1.60e-14 | 2 |
regional part of telencephalon | 1.24e-11 | 32 |
cerebral hemisphere | 1.24e-11 | 32 |
brain grey matter | 5.12e-11 | 34 |
gray matter | 5.12e-11 | 34 |
telencephalon | 5.12e-11 | 34 |
regional part of forebrain | 2.59e-09 | 41 |
forebrain | 2.59e-09 | 41 |
anterior neural tube | 2.59e-09 | 41 |
future forebrain | 2.59e-09 | 41 |
occipital lobe | 2.74e-09 | 5 |
small intestine | 2.97e-09 | 4 |
central nervous system | 2.64e-08 | 81 |
gyrus | 5.54e-08 | 6 |
nervous system | 1.50e-07 | 89 |
regional part of nervous system | 2.08e-07 | 53 |
regional part of brain | 2.08e-07 | 53 |
neural tube | 4.68e-07 | 56 |
neural rod | 4.68e-07 | 56 |
future spinal cord | 4.68e-07 | 56 |
neural keel | 4.68e-07 | 56 |