FFCP PHASE1:Hg19::chr10:32217717..32217781,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94134 | |EntrezGene=94134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16348 | |HGNC=16348 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IWW6,Q504X1 | |UniProt=Q8IWW6,Q504X1 | ||
|association_with_transcript=0bp_to_ENST00000344936,ENST00000375245,ENST00000375250,ENST00000396144,NM_018287,uc001ivz.1,uc001iwb.1,uc001iwc.1,uc001iwd.1,uc009xlq.1,uc009xlr.1,uc009xls.2_5end | |association_with_transcript=0bp_to_ENST00000344936,ENST00000375245,ENST00000375250,ENST00000396144,NM_018287,uc001ivz.1,uc001iwb.1,uc001iwc.1,uc001iwd.1,uc009xlq.1,uc009xlr.1,uc009xls.2_5end | ||
|cluster_id=chr10:32217717..32217781,- | |||
|description=CAGE_peak_1_at_ARHGAP12_5end | |description=CAGE_peak_1_at_ARHGAP12_5end | ||
|id=chr10:32217717..32217781,- | |id=chr10:32217717..32217781,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-17!115;UBERON:0001017!6.27e-16!82;UBERON:0001049!3.13e-15!57;UBERON:0005068!3.13e-15!57;UBERON:0006241!3.13e-15!57;UBERON:0007135!3.13e-15!57;UBERON:0005743!1.16e-14!86;UBERON:0000073!1.93e-14!94;UBERON:0001016!1.93e-14!94;UBERON:0002616!1.81e-12!59;UBERON:0000955!6.09e-12!69;UBERON:0006238!6.09e-12!69;UBERON:0003080!2.90e-11!42;UBERON:0002780!4.39e-11!41;UBERON:0001890!4.39e-11!41;UBERON:0006240!4.39e-11!41;UBERON:0000924!1.26e-10!173;UBERON:0006601!1.26e-10!173;UBERON:0004121!2.82e-10!169;UBERON:0000153!3.43e-10!129;UBERON:0007811!3.43e-10!129;UBERON:0002346!5.12e-10!90;UBERON:0003075!1.06e-09!86;UBERON:0007284!1.06e-09!86;UBERON:0002020!2.93e-09!34;UBERON:0003528!2.93e-09!34;UBERON:0000033!3.39e-09!123;UBERON:0001893!9.93e-09!34;UBERON:0002791!1.65e-08!33;UBERON:0005409!3.31e-08!35;UBERON:0001869!5.62e-08!32;UBERON:0000160!8.32e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-17!115;UBERON:0001017!6.27e-16!82;UBERON:0001049!3.13e-15!57;UBERON:0005068!3.13e-15!57;UBERON:0006241!3.13e-15!57;UBERON:0007135!3.13e-15!57;UBERON:0005743!1.16e-14!86;UBERON:0000073!1.93e-14!94;UBERON:0001016!1.93e-14!94;UBERON:0002616!1.81e-12!59;UBERON:0000955!6.09e-12!69;UBERON:0006238!6.09e-12!69;UBERON:0003080!2.90e-11!42;UBERON:0002780!4.39e-11!41;UBERON:0001890!4.39e-11!41;UBERON:0006240!4.39e-11!41;UBERON:0000924!1.26e-10!173;UBERON:0006601!1.26e-10!173;UBERON:0004121!2.82e-10!169;UBERON:0000153!3.43e-10!129;UBERON:0007811!3.43e-10!129;UBERON:0002346!5.12e-10!90;UBERON:0003075!1.06e-09!86;UBERON:0007284!1.06e-09!86;UBERON:0002020!2.93e-09!34;UBERON:0003528!2.93e-09!34;UBERON:0000033!3.39e-09!123;UBERON:0001893!9.93e-09!34;UBERON:0002791!1.65e-08!33;UBERON:0005409!3.31e-08!35;UBERON:0001869!5.62e-08!32;UBERON:0000160!8.32e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41!UBERON:0003528;6.82e-08;34!UBERON:0002020;6.82e-08;34!UBERON:0002791;1.36e-07;32!UBERON:0001893;2.26e-07;34!UBERON:0001869;2.45e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000073;1.28e-08;53!UBERON:0002616;1.28e-08;53!UBERON:0002780;1.93e-08;41!UBERON:0001890;1.93e-08;41!UBERON:0003528;6.82e-08;34!UBERON:0002020;6.82e-08;34!UBERON:0002791;1.36e-07;32!UBERON:0001893;2.26e-07;34!UBERON:0001869;2.45e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.58e-17,114;UBERON:0001017,9.84e-16,81;UBERON:0001016,2.09e-15,89;UBERON:0001049,4.79e-15,56;UBERON:0005068,4.79e-15,56;UBERON:0006241,4.79e-15,56;UBERON:0007135,4.79e-15,56;UBERON:0011216,1.38e-14,223;UBERON:0000073,1.83e-13,53;UBERON:0002616,1.83e-13,53;UBERON:0000955,9.37e-12,68;UBERON:0006238,9.37e-12,68;UBERON:0002780,4.39e-11,41;UBERON:0001890,4.39e-11,41;UBERON:0003080,4.39e-11,41;UBERON:0006240,4.39e-11,41;UBERON:0004121,6.66e-10,171;UBERON:0000924,6.66e-10,171;UBERON:0006601,6.66e-10,171;UBERON:0003528,2.93e-09,34;UBERON:0002020,2.93e-09,34;UBERON:0002346,3.65e-09,86;UBERON:0003075,7.53e-09,82;UBERON:0007284,7.53e-09,82;UBERON:0001893,9.93e-09,34;UBERON:0002791,3.37e-08,32;UBERON:0001869,5.62e-08,32;UBERON:0010314,1.78e-07,132;UBERON:0005409,8.86e-07,25 | |||
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| ||
|short_description=p1@ARHGAP12 | |short_description=p1@ARHGAP12 | ||
}} | }} |
Latest revision as of 23:34, 17 September 2015
Short description: | p1@ARHGAP12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGAP12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344936, ENST00000375245, ENST00000375250, ENST00000396144, NM_018287, uc001ivz.1, uc001iwb.1, uc001iwc.1, uc001iwd.1, uc009xlq.1, uc009xlr.1, uc009xls.2_5end |
EntrezGene: | ARHGAP12 |
HGNC: | 16348 |
UniProt: | Q8IWW6Q504X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.58e-17 | 114 |
central nervous system | 9.84e-16 | 81 |
nervous system | 2.09e-15 | 89 |
neural tube | 4.79e-15 | 56 |
neural rod | 4.79e-15 | 56 |
future spinal cord | 4.79e-15 | 56 |
neural keel | 4.79e-15 | 56 |
organ system subdivision | 1.38e-14 | 223 |
regional part of nervous system | 1.83e-13 | 53 |
regional part of brain | 1.83e-13 | 53 |
brain | 9.37e-12 | 68 |
future brain | 9.37e-12 | 68 |
regional part of forebrain | 4.39e-11 | 41 |
forebrain | 4.39e-11 | 41 |
anterior neural tube | 4.39e-11 | 41 |
future forebrain | 4.39e-11 | 41 |
ectoderm-derived structure | 6.66e-10 | 171 |
ectoderm | 6.66e-10 | 171 |
presumptive ectoderm | 6.66e-10 | 171 |
brain grey matter | 2.93e-09 | 34 |
gray matter | 2.93e-09 | 34 |
neurectoderm | 3.65e-09 | 86 |
neural plate | 7.53e-09 | 82 |
presumptive neural plate | 7.53e-09 | 82 |
telencephalon | 9.93e-09 | 34 |
regional part of telencephalon | 3.37e-08 | 32 |
cerebral hemisphere | 5.62e-08 | 32 |
structure with developmental contribution from neural crest | 1.78e-07 | 132 |
gastrointestinal system | 8.86e-07 | 25 |