FFCP PHASE1:Hg19::chr7:65338055..65338071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154807 | |EntrezGene=154807 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21492 | |HGNC=21492 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N0U8 | |UniProt=Q8N0U8 | ||
|association_with_transcript=-182bp_to_ENST00000360768_5end | |association_with_transcript=-182bp_to_ENST00000360768_5end | ||
|cluster_id=chr7:65338055..65338071,+ | |||
|description=CAGE_peak_4_at_VKORC1L1_5end | |description=CAGE_peak_4_at_VKORC1L1_5end | ||
|id=chr7:65338055..65338071,+ | |id=chr7:65338055..65338071,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.72e-14;13!CL:0000540;2.66e-07;6!CL:0000404;2.66e-07;6 | |ontology_enrichment_celltype_v019=CL:0000136;7.72e-14;13!CL:0000540;2.66e-07;6!CL:0000404;2.66e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.34e-14,15;CL:0000047,1.96e-07,8;CL:0000540,3.38e-07,6;CL:0000031,3.38e-07,6;CL:0000404,3.38e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;2.66e-07;6 | |ontology_enrichment_development_v019=CL:0000031;2.66e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!4.20e-14!86;UBERON:0001017!7.20e-14!82;UBERON:0000073!1.82e-13!94;UBERON:0001016!1.82e-13!94;UBERON:0001049!8.27e-13!57;UBERON:0005068!8.27e-13!57;UBERON:0006241!8.27e-13!57;UBERON:0007135!8.27e-13!57;UBERON:0003080!2.00e-12!42;UBERON:0002780!8.02e-12!41;UBERON:0001890!8.02e-12!41;UBERON:0006240!8.02e-12!41;UBERON:0002346!9.07e-12!90;UBERON:0000955!9.22e-12!69;UBERON:0006238!9.22e-12!69;UBERON:0003075!2.13e-11!86;UBERON:0007284!2.13e-11!86;UBERON:0003056!4.78e-11!61;UBERON:0002616!7.65e-11!59;UBERON:0000924!2.63e-10!173;UBERON:0006601!2.63e-10!173;UBERON:0001893!3.37e-10!34;UBERON:0004121!6.42e-10!169;UBERON:0002791!1.25e-09!33;UBERON:0002020!1.32e-09!34;UBERON:0003528!1.32e-09!34;UBERON:0001869!2.00e-09!32;UBERON:0000153!9.94e-09!129;UBERON:0007811!9.94e-09!129;UBERON:0000033!1.38e-08!123;UBERON:0000956!3.72e-07!25;UBERON:0000203!3.72e-07!25;UBERON:0000475!8.61e-07!365 | |ontology_enrichment_uberon=UBERON:0005743!4.20e-14!86;UBERON:0001017!7.20e-14!82;UBERON:0000073!1.82e-13!94;UBERON:0001016!1.82e-13!94;UBERON:0001049!8.27e-13!57;UBERON:0005068!8.27e-13!57;UBERON:0006241!8.27e-13!57;UBERON:0007135!8.27e-13!57;UBERON:0003080!2.00e-12!42;UBERON:0002780!8.02e-12!41;UBERON:0001890!8.02e-12!41;UBERON:0006240!8.02e-12!41;UBERON:0002346!9.07e-12!90;UBERON:0000955!9.22e-12!69;UBERON:0006238!9.22e-12!69;UBERON:0003075!2.13e-11!86;UBERON:0007284!2.13e-11!86;UBERON:0003056!4.78e-11!61;UBERON:0002616!7.65e-11!59;UBERON:0000924!2.63e-10!173;UBERON:0006601!2.63e-10!173;UBERON:0001893!3.37e-10!34;UBERON:0004121!6.42e-10!169;UBERON:0002791!1.25e-09!33;UBERON:0002020!1.32e-09!34;UBERON:0003528!1.32e-09!34;UBERON:0001869!2.00e-09!32;UBERON:0000153!9.94e-09!129;UBERON:0007811!9.94e-09!129;UBERON:0000033!1.38e-08!123;UBERON:0000956!3.72e-07!25;UBERON:0000203!3.72e-07!25;UBERON:0000475!8.61e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.83e-11;41!UBERON:0001890;1.83e-11;41!UBERON:0001893;1.08e-09;34!UBERON:0001869;1.83e-09;32!UBERON:0002791;1.54e-08;32!UBERON:0000073;8.02e-08;53!UBERON:0002616;8.02e-08;53!UBERON:0003528;1.19e-07;34!UBERON:0002020;1.19e-07;34!UBERON:0000956;1.63e-07;25!UBERON:0000203;1.63e-07;25!UBERON:0003296;2.08e-07;4!UBERON:0010133;2.08e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.83e-11;41!UBERON:0001890;1.83e-11;41!UBERON:0001893;1.08e-09;34!UBERON:0001869;1.83e-09;32!UBERON:0002791;1.54e-08;32!UBERON:0000073;8.02e-08;53!UBERON:0002616;8.02e-08;53!UBERON:0003528;1.19e-07;34!UBERON:0002020;1.19e-07;34!UBERON:0000956;1.63e-07;25!UBERON:0000203;1.63e-07;25!UBERON:0003296;2.08e-07;4!UBERON:0010133;2.08e-07;4 | ||
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|phase1_expression=1.09007027562334,2.5692062866918,0.704772020479856,1.0007329835313,1.78784437770915,0,2.53299878168311,0.631719873426831,3.3954131665979,0.245733936501509,0.697801167972428,0.655324116390517,0.791300934685361,0,0.662794751455832,0.672325146451775,0,0,0,0.738726348460727,0.816002764977012,0.626909442956176,1.43117993565528,0.821246550437305,1.38096903554283,0.534893840235659,0.410502947249729,0.0787107813136792,0,0,0,0,0.6024118375565,0,0.852139206383318,0.142169232487422,0.293600439334847,0,0,0,0,0,0.77272670290256,0,0,0.485168122375632,0,0.411167888021826,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.221533894583621,0,0,0.260118695119756,0,0,0,0.296573126324121,0.802622484269139,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.473554504088034,0,0.403213486449465,0.534880391567015,0.579297615531196,0,0.670700859703636,0.767175371061182,1.0843174571537,0.50133791063589,0.579386075843295,0,0.973269740605272,0.189069634328136,1.33037638477538,0.614843499851882,0.458426764241994,0,0.370784442784429,0.324547393654683,0,0.531831842075461,0.238490624305342,0,0,0.79504962946682,0,0.347140501607594,0.56530794192401,0.838998872419812,0.275118041940067,0,0.258416759169329,0.71153252537342,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0.357198913136319,0.22452937262617,0.450445921933289,0,0,0.732806975721629,0,0,0,0.993943903390637,0.25326102332916,0,0.286836620748814,1.06400514659507,0,0,0,0,0.67355336034844,0.163461903113459,0,0.576175924479999,1.64025002283658,0.312160076830321,0.570471821544449,0.298897361103602,0.822041490506354,0.809364721840658,0.561803226808994,0.408308342509787,0.368502951935304,0.516628905878827,1.18800285728205,0,0,0,0.841680569770331,0.375355559615893,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.226864366320042,0.179389635688862,0.427114777637135,0.635795703478686,0.300091096084402,0.824420233907511,0.515281080091258,0.18611685633159,0.337552664482532,1.16924406193438,0.252433774244115,0.736399189138395,0.323292113637624,0.355009592516614,0.201504196455281,0.339121184620975,0,0,0.573609190778008,0.853815942907168,0.795178609928912,1.16193942869518,0.310983165046111,0.756962552626885,0.36497735907583,1.56449532329816,0,0,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,2.057870056657,0,0,0,0,0,0.368965315629341,0.686271241194102,0.329250856225877,0,0.201057944823262,0.185176890317059,0.325808305310325,0,1.44331342025273,0.927443239800615,0.70445216541493,0.144366447761074,0,0.761016608938393,0,0,0,0.936017060556951,0.743155811443641,0,0.335964256397719,0.283550194484773,0.716468181622786,0,0.383382679165211,0,0.352193736052904,0,0,0.25248486685276,0.317489471460845,0.381988425558278,0,1.71072446022705,0.411309970813294,0,0.285826432630578,1.00917975910825,0.43596006883328,0.22001485746285,0.646358578788889,0,0,0.531876233169741,0,1.28603687131071,0,0.532844358032199,0.428933980974443,0,0.823240336780769,0.977208552881205,0.355391948742546,0.791951872933429,0.602878754119172,0,0.699810938274399,0,0,0,1.19812427745791,0,0,0.289562613335158,0.205476322550383,0.716243852959582,0.784596007954691,0.197030760201927,0.215627574859517,0,0,1.30139853857622,1.54657762555539,1.00509759200609,0,0,0,0,1.10422342547226,0,0.813795071099207,0,0.535286966391485,0.315404830067869,0.234282829985426,0.300946099727719,0,0,0.664225598535437,0.921845842708516,0.434418072340414,0.391602314925481,0.686286847621712,0,0,0,0,0,1.20956117331872,0,0.460385919864187,1.40330047216537,0.640695746278505,0.511707249066704,0.804269605718038,0,0.154209693802656,0.355123450626254,0.657017248110473,0,0.581051892299796,0.241718899183244,0.200506470303285,0.644566922551274,0.34444334449382,0.182091168006717,0.393373244878272,1.35359883872224,1.15523005656622,1.56869953835371,0,0.422206515571503,0,0.340187410553031,0.431831832204279,3.08454505380579,1.08378575017541,1.00337954770971,0.764628819135115,0,0.223874754722178,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0.206082023295445,1.28197250745681,1.23764249880882,0.574265537996172,0,3.21367859688319,0.580024309752732,0.154048617114644,0,0.413509717453592,0.322260734604821,0.290033387828457,0.426133137080504,0.267096106940212,0,0.576570202095319,0,0.50578890427775,0.464845549297286,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0.55597265731176,0.858749320451947,0,0.316379424718726,0.571890581771475,0.255897791311334,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0.471249609382746,0.404364963146632,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0.409499734223957,0.707027159768564,0,0,0,0.8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| ||
|short_description=p4@VKORC1L1 | |short_description=p4@VKORC1L1 | ||
}} | }} |
Latest revision as of 05:38, 19 September 2015
Short description: | p4@VKORC1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VKORC1L1_5end |
Coexpression cluster: | NA |
Association with transcript: | -182bp_to_ENST00000360768_5end |
EntrezGene: | VKORC1L1 |
HGNC: | 21492 |
UniProt: | Q8N0U8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.34e-14 | 15 |
neuronal stem cell | 1.96e-07 | 8 |
neuron | 3.38e-07 | 6 |
neuroblast | 3.38e-07 | 6 |
electrically signaling cell | 3.38e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.21e-17 | 81 |
regional part of forebrain | 1.49e-16 | 41 |
forebrain | 1.49e-16 | 41 |
anterior neural tube | 1.49e-16 | 41 |
future forebrain | 1.49e-16 | 41 |
nervous system | 5.37e-16 | 89 |
neural tube | 4.67e-14 | 56 |
neural rod | 4.67e-14 | 56 |
future spinal cord | 4.67e-14 | 56 |
neural keel | 4.67e-14 | 56 |
regional part of nervous system | 1.46e-12 | 53 |
regional part of brain | 1.46e-12 | 53 |
pre-chordal neural plate | 2.02e-12 | 61 |
telencephalon | 3.90e-12 | 34 |
cerebral hemisphere | 1.24e-11 | 32 |
brain | 2.97e-11 | 68 |
future brain | 2.97e-11 | 68 |
neural plate | 4.73e-10 | 82 |
presumptive neural plate | 4.73e-10 | 82 |
regional part of telencephalon | 5.39e-10 | 32 |
neurectoderm | 2.99e-09 | 86 |
brain grey matter | 3.41e-09 | 34 |
gray matter | 3.41e-09 | 34 |
cerebral cortex | 1.91e-08 | 25 |
pallium | 1.91e-08 | 25 |
ecto-epithelium | 6.07e-08 | 104 |
gland of diencephalon | 1.77e-07 | 4 |
neuroendocrine gland | 1.77e-07 | 4 |
adult organism | 2.60e-07 | 114 |
ectoderm-derived structure | 2.98e-07 | 171 |
ectoderm | 2.98e-07 | 171 |
presumptive ectoderm | 2.98e-07 | 171 |
regional part of cerebral cortex | 7.77e-07 | 22 |