FFCP PHASE1:Hg19::chr10:27149904..27149920,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10006 | |EntrezGene=10006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11320 | |HGNC=11320 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000376166_5end | |association_with_transcript=0bp_to_ENST00000376166_5end | ||
|cluster_id=chr10:27149904..27149920,- | |||
|description=CAGE_peak_3_at_ABI1_5end | |description=CAGE_peak_3_at_ABI1_5end | ||
|id=chr10:27149904..27149920,- | |id=chr10:27149904..27149920,- | ||
|ontology_enrichment_celltype=CL:0000738!1.94e-20!140;CL:0002087!1.09e-16!119;CL:0002031!5.48e-16!124;CL:0002057!1.07e-15!42;CL:0000860!3.31e-14!45;CL:0000037!3.85e-14!172;CL:0000566!3.85e-14!172;CL:0000766!4.10e-14!76;CL:0002032!7.85e-14!165;CL:0000837!7.85e-14!165;CL:0002009!3.04e-13!65;CL:0002194!2.97e-12!63;CL:0000576!2.97e-12!63;CL:0000040!2.97e-12!63;CL:0000559!2.97e-12!63;CL:0000557!8.61e-12!71;CL:0000988!3.35e-11!182;CL:0000839!6.13e-11!70;CL:0000763!4.49e-09!112;CL:0000049!4.49e-09!112;CL:0000945!3.91e-07!24;CL:0000826!3.91e-07!24 | |ontology_enrichment_celltype=CL:0000738!1.94e-20!140;CL:0002087!1.09e-16!119;CL:0002031!5.48e-16!124;CL:0002057!1.07e-15!42;CL:0000860!3.31e-14!45;CL:0000037!3.85e-14!172;CL:0000566!3.85e-14!172;CL:0000766!4.10e-14!76;CL:0002032!7.85e-14!165;CL:0000837!7.85e-14!165;CL:0002009!3.04e-13!65;CL:0002194!2.97e-12!63;CL:0000576!2.97e-12!63;CL:0000040!2.97e-12!63;CL:0000559!2.97e-12!63;CL:0000557!8.61e-12!71;CL:0000988!3.35e-11!182;CL:0000839!6.13e-11!70;CL:0000763!4.49e-09!112;CL:0000049!4.49e-09!112;CL:0000945!3.91e-07!24;CL:0000826!3.91e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.68e-15;33!CL:0002057;1.68e-15;33!CL:0000473;2.17e-13;39!CL:0000234;2.17e-13;39!CL:0000576;5.31e-10;48!CL:0000766;6.15e-08;69!CL:0002087;3.02e-07;104!CL:0000945;3.60e-07;24 | |ontology_enrichment_celltype_v019=CL:0000860;1.68e-15;33!CL:0002057;1.68e-15;33!CL:0000473;2.17e-13;39!CL:0000234;2.17e-13;39!CL:0000576;5.31e-10;48!CL:0000766;6.15e-08;69!CL:0002087;3.02e-07;104!CL:0000945;3.60e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.50e-21,136;CL:0002087,9.12e-18,115;CL:0002031,5.33e-17,120;CL:0000473,2.76e-16,48;CL:0000234,2.76e-16,48;CL:0000860,1.07e-15,42;CL:0002057,1.07e-15,42;CL:0000766,1.86e-15,72;CL:0000037,7.24e-15,168;CL:0002009,1.09e-14,61;CL:0002032,1.44e-14,161;CL:0000837,1.44e-14,161;CL:0002194,1.21e-13,59;CL:0000576,1.21e-13,59;CL:0000040,1.21e-13,59;CL:0000559,1.21e-13,59;CL:0000557,5.13e-13,67;CL:0000839,4.19e-12,66;CL:0000988,4.25e-12,177;CL:0000763,8.86e-10,108;CL:0000049,8.86e-10,108;CL:0000945,3.91e-07,24;CL:0000826,3.91e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;5.71e-12;42 | |ontology_enrichment_development_v019=CL:0002057;5.71e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.20e-16!115;UBERON:0001049!4.91e-13!57;UBERON:0005068!4.91e-13!57;UBERON:0006241!4.91e-13!57;UBERON:0007135!4.91e-13!57;UBERON:0002390!1.19e-11!102;UBERON:0003061!1.19e-11!102;UBERON:0003080!8.48e-11!42;UBERON:0002780!1.02e-10!41;UBERON:0001890!1.02e-10!41;UBERON:0006240!1.02e-10!41;UBERON:0002020!2.37e-10!34;UBERON:0003528!2.37e-10!34;UBERON:0002371!5.13e-10!80;UBERON:0001893!5.43e-10!34;UBERON:0002791!8.36e-10!33;UBERON:0002193!9.72e-10!112;UBERON:0002616!1.27e-09!59;UBERON:0001474!1.37e-09!86;UBERON:0001869!2.21e-09!32;UBERON:0004765!6.37e-09!101;UBERON:0001434!6.37e-09!101;UBERON:0001017!2.08e-08!82;UBERON:0000955!6.39e-08!69;UBERON:0006238!6.39e-08!69;UBERON:0005743!9.85e-08!86;UBERON:0003075!4.63e-07!86;UBERON:0007284!4.63e-07!86;UBERON:0002346!6.00e-07!90 | |ontology_enrichment_uberon=UBERON:0007023!7.20e-16!115;UBERON:0001049!4.91e-13!57;UBERON:0005068!4.91e-13!57;UBERON:0006241!4.91e-13!57;UBERON:0007135!4.91e-13!57;UBERON:0002390!1.19e-11!102;UBERON:0003061!1.19e-11!102;UBERON:0003080!8.48e-11!42;UBERON:0002780!1.02e-10!41;UBERON:0001890!1.02e-10!41;UBERON:0006240!1.02e-10!41;UBERON:0002020!2.37e-10!34;UBERON:0003528!2.37e-10!34;UBERON:0002371!5.13e-10!80;UBERON:0001893!5.43e-10!34;UBERON:0002791!8.36e-10!33;UBERON:0002193!9.72e-10!112;UBERON:0002616!1.27e-09!59;UBERON:0001474!1.37e-09!86;UBERON:0001869!2.21e-09!32;UBERON:0004765!6.37e-09!101;UBERON:0001434!6.37e-09!101;UBERON:0001017!2.08e-08!82;UBERON:0000955!6.39e-08!69;UBERON:0006238!6.39e-08!69;UBERON:0005743!9.85e-08!86;UBERON:0003075!4.63e-07!86;UBERON:0007284!4.63e-07!86;UBERON:0002346!6.00e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.01e-09;34!UBERON:0002020;4.01e-09;34!UBERON:0002791;1.04e-08;32!UBERON:0001893;1.21e-08;34!UBERON:0001869;1.38e-08;32!UBERON:0002780;6.18e-08;41!UBERON:0001890;6.18e-08;41!UBERON:0000073;4.38e-07;53!UBERON:0002616;4.38e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0003528;4.01e-09;34!UBERON:0002020;4.01e-09;34!UBERON:0002791;1.04e-08;32!UBERON:0001893;1.21e-08;34!UBERON:0001869;1.38e-08;32!UBERON:0002780;6.18e-08;41!UBERON:0001890;6.18e-08;41!UBERON:0000073;4.38e-07;53!UBERON:0002616;4.38e-07;53 | ||
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| ||
|short_description=p3@ABI1 | |short_description=p3@ABI1 | ||
}} | }} |
Latest revision as of 18:37, 17 September 2015
Short description: | p3@ABI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376166_5end |
EntrezGene: | ABI1 |
HGNC: | 11320 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.50e-21 | 136 |
nongranular leukocyte | 9.12e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 5.33e-17 | 120 |
defensive cell | 2.76e-16 | 48 |
phagocyte | 2.76e-16 | 48 |
classical monocyte | 1.07e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-15 | 42 |
myeloid leukocyte | 1.86e-15 | 72 |
hematopoietic stem cell | 7.24e-15 | 168 |
macrophage dendritic cell progenitor | 1.09e-14 | 61 |
hematopoietic oligopotent progenitor cell | 1.44e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-14 | 161 |
monopoietic cell | 1.21e-13 | 59 |
monocyte | 1.21e-13 | 59 |
monoblast | 1.21e-13 | 59 |
promonocyte | 1.21e-13 | 59 |
granulocyte monocyte progenitor cell | 5.13e-13 | 67 |
myeloid lineage restricted progenitor cell | 4.19e-12 | 66 |
hematopoietic cell | 4.25e-12 | 177 |
myeloid cell | 8.86e-10 | 108 |
common myeloid progenitor | 8.86e-10 | 108 |
lymphocyte of B lineage | 3.91e-07 | 24 |
pro-B cell | 3.91e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.81e-15 | 114 |
neural tube | 6.03e-13 | 56 |
neural rod | 6.03e-13 | 56 |
future spinal cord | 6.03e-13 | 56 |
neural keel | 6.03e-13 | 56 |
hematopoietic system | 1.43e-12 | 98 |
blood island | 1.43e-12 | 98 |
regional part of nervous system | 1.05e-11 | 53 |
regional part of brain | 1.05e-11 | 53 |
bone marrow | 5.39e-11 | 76 |
regional part of forebrain | 1.02e-10 | 41 |
forebrain | 1.02e-10 | 41 |
anterior neural tube | 1.02e-10 | 41 |
future forebrain | 1.02e-10 | 41 |
hemolymphoid system | 1.75e-10 | 108 |
bone element | 1.75e-10 | 82 |
brain grey matter | 2.37e-10 | 34 |
gray matter | 2.37e-10 | 34 |
telencephalon | 5.43e-10 | 34 |
regional part of telencephalon | 1.68e-09 | 32 |
cerebral hemisphere | 2.21e-09 | 32 |
immune system | 2.59e-09 | 93 |
skeletal element | 3.16e-09 | 90 |
skeletal system | 1.04e-08 | 100 |
central nervous system | 2.66e-08 | 81 |
brain | 8.13e-08 | 68 |
future brain | 8.13e-08 | 68 |