FFCP PHASE1:Hg19::chr1:41174988..41175047,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:41174988..41175047,+
|short_description=p4@NFYC
|description=CAGE_peak_4_at_NFYC_5end
|association_with_transcript=0bp_to_ENST00000372652,uc001cgb.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4802 | |EntrezGene=4802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7806 | |HGNC=7806 | ||
|TSSclassifier=strong | |||
|UniProt=Q13952 | |UniProt=Q13952 | ||
|association_with_transcript=0bp_to_ENST00000372652,uc001cgb.2_5end | |||
|cluster_id=chr1:41174988..41175047,+ | |||
|description=CAGE_peak_4_at_NFYC_5end | |||
|id=chr1:41174988..41175047,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.46e-08!24;CL:0000826!1.46e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.10e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.97e-09,24;CL:0000826,7.97e-09,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.42e-20!115;UBERON:0005743!2.34e-16!86;UBERON:0001017!7.05e-16!82;UBERON:0000073!1.19e-15!94;UBERON:0001016!1.19e-15!94;UBERON:0001049!3.78e-14!57;UBERON:0005068!3.78e-14!57;UBERON:0006241!3.78e-14!57;UBERON:0007135!3.78e-14!57;UBERON:0002346!2.66e-13!90;UBERON:0000955!3.29e-13!69;UBERON:0006238!3.29e-13!69;UBERON:0000924!3.34e-13!173;UBERON:0006601!3.34e-13!173;UBERON:0000153!3.73e-13!129;UBERON:0007811!3.73e-13!129;UBERON:0003075!7.66e-13!86;UBERON:0007284!7.66e-13!86;UBERON:0004121!1.04e-12!169;UBERON:0002780!2.41e-12!41;UBERON:0001890!2.41e-12!41;UBERON:0006240!2.41e-12!41;UBERON:0002616!4.61e-12!59;UBERON:0000033!6.87e-12!123;UBERON:0003080!2.05e-11!42;UBERON:0003056!3.24e-11!61;UBERON:0001893!2.02e-10!34;UBERON:0001869!3.04e-10!32;UBERON:0002791!5.43e-10!33;UBERON:0002020!6.09e-10!34;UBERON:0003528!6.09e-10!34;UBERON:0000956!2.11e-09!25;UBERON:0000203!2.11e-09!25;UBERON:0002619!9.37e-09!22;UBERON:0001950!1.54e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.31e-09;25!UBERON:0000203;1.31e-09;25!UBERON:0001869;1.74e-09;32!UBERON:0001893;2.42e-09;34!UBERON:0002780;2.79e-09;41!UBERON:0001890;2.79e-09;41!UBERON:0002791;3.87e-09;32!UBERON:0000073;3.94e-09;53!UBERON:0002616;3.94e-09;53!UBERON:0003528;4.53e-09;34!UBERON:0002020;4.53e-09;34!UBERON:0002619;7.45e-09;22!UBERON:0001950;1.51e-08;20!UBERON:0000922;2.02e-07;49!UBERON:0000955;4.76e-07;68!UBERON:0001017;5.13e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-19,114;UBERON:0001017,8.95e-17,81;UBERON:0001016,2.39e-15,89;UBERON:0001049,2.67e-15,56;UBERON:0005068,2.67e-15,56;UBERON:0006241,2.67e-15,56;UBERON:0007135,2.67e-15,56;UBERON:0002346,5.09e-15,86;UBERON:0000073,1.43e-14,53;UBERON:0002616,1.43e-14,53;UBERON:0003075,1.50e-14,82;UBERON:0007284,1.50e-14,82;UBERON:0000955,4.01e-14,68;UBERON:0006238,4.01e-14,68;UBERON:0004121,4.64e-13,171;UBERON:0000924,4.64e-13,171;UBERON:0006601,4.64e-13,171;UBERON:0003056,1.07e-12,61;UBERON:0002780,1.75e-12,41;UBERON:0001890,1.75e-12,41;UBERON:0003080,1.75e-12,41;UBERON:0006240,1.75e-12,41;UBERON:0011216,3.16e-12,223;UBERON:0010371,1.55e-10,104;UBERON:0001893,1.75e-10,34;UBERON:0001869,2.70e-10,32;UBERON:0003528,5.39e-10,34;UBERON:0002020,5.39e-10,34;UBERON:0002791,7.85e-10,32;UBERON:0000956,2.12e-09,25;UBERON:0000203,2.12e-09,25;UBERON:0002619,1.01e-08,22;UBERON:0001950,1.73e-08,20 | |||
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| ||
|short_description=p4@NFYC | |||
}} | }} |
Latest revision as of 01:55, 18 September 2015
Short description: | p4@NFYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFYC_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372652, uc001cgb.2_5end |
EntrezGene: | NFYC |
HGNC: | 7806 |
UniProt: | Q13952 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.97e-09 | 24 |
pro-B cell | 7.97e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.31e-19 | 114 |
central nervous system | 8.95e-17 | 81 |
nervous system | 2.39e-15 | 89 |
neural tube | 2.67e-15 | 56 |
neural rod | 2.67e-15 | 56 |
future spinal cord | 2.67e-15 | 56 |
neural keel | 2.67e-15 | 56 |
neurectoderm | 5.09e-15 | 86 |
regional part of nervous system | 1.43e-14 | 53 |
regional part of brain | 1.43e-14 | 53 |
neural plate | 1.50e-14 | 82 |
presumptive neural plate | 1.50e-14 | 82 |
brain | 4.01e-14 | 68 |
future brain | 4.01e-14 | 68 |
ectoderm-derived structure | 4.64e-13 | 171 |
ectoderm | 4.64e-13 | 171 |
presumptive ectoderm | 4.64e-13 | 171 |
pre-chordal neural plate | 1.07e-12 | 61 |
regional part of forebrain | 1.75e-12 | 41 |
forebrain | 1.75e-12 | 41 |
anterior neural tube | 1.75e-12 | 41 |
future forebrain | 1.75e-12 | 41 |
organ system subdivision | 3.16e-12 | 223 |
ecto-epithelium | 1.55e-10 | 104 |
telencephalon | 1.75e-10 | 34 |
cerebral hemisphere | 2.70e-10 | 32 |
brain grey matter | 5.39e-10 | 34 |
gray matter | 5.39e-10 | 34 |
regional part of telencephalon | 7.85e-10 | 32 |
cerebral cortex | 2.12e-09 | 25 |
pallium | 2.12e-09 | 25 |
regional part of cerebral cortex | 1.01e-08 | 22 |
neocortex | 1.73e-08 | 20 |