FFCP PHASE1:Hg19::chr1:45477901..45477935,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:45477901..45477935,+
|short_description=p1@UROD
|description=CAGE_peak_1_at_UROD_5end
|association_with_transcript=0bp_to_ENST00000372135,ENST00000372139,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7389 | |EntrezGene=7389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12591 | |HGNC=12591 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T446 | |UniProt=Q5T446 | ||
|association_with_transcript=0bp_to_ENST00000372135,ENST00000372139,ENST00000434478,ENST00000460334,ENST00000494399_5end | |||
|cluster_id=chr1:45477901..45477935,+ | |||
|description=CAGE_peak_1_at_UROD_5end | |||
|id=chr1:45477901..45477935,+ | |||
|ontology_enrichment_celltype=CL:0000144!2.98e-34!625;CL:0000222!9.66e-32!119;CL:0002371!2.93e-31!591;CL:0000012!2.20e-30!682;CL:0000548!1.67e-29!679;CL:0000004!1.67e-29!679;CL:0000255!1.67e-29!679;CL:0000220!2.10e-29!246;CL:0002321!3.42e-29!248;CL:0000055!2.85e-25!180;CL:0000003!2.71e-20!722;CL:0000183!1.60e-19!59;CL:0000680!3.25e-17!57;CL:0000056!3.25e-17!57;CL:0000355!3.25e-17!57;CL:0000187!7.86e-17!54;CL:0000192!1.93e-15!42;CL:0000514!1.93e-15!42;CL:0000393!2.12e-15!60;CL:0000211!2.12e-15!60;CL:0000213!4.62e-14!57;CL:0000215!4.62e-14!57;CL:0002078!5.42e-14!44;CL:0000115!8.78e-14!35;CL:0000359!1.24e-12!32;CL:0002139!6.84e-10!24;CL:0000066!7.51e-10!254;CL:0000063!3.09e-09!578;CL:0000057!1.20e-08!75;CL:0000071!1.86e-08!18;CL:0002546!1.86e-08!18;CL:0000034!1.37e-07!444;CL:0000723!1.85e-07!436;CL:0000048!2.55e-07!430;CL:1000449!7.82e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.53e-12;36!CL:0000359;6.40e-12;32!CL:0000192;4.10e-11;43!CL:0002078;5.13e-10;45!CL:0002139;7.08e-10;24!CL:0000187;1.03e-09;55!CL:0000213;1.18e-08;58!CL:0000215;1.18e-08;58!CL:0000071;1.91e-08;18!CL:0000393;2.32e-08;61!CL:0000211;2.32e-08;61!CL:1000449;7.12e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.30e-32,121;CL:0002321,8.06e-30,250;CL:0000680,3.10e-17,58;CL:0000056,3.10e-17,58;CL:0000355,3.10e-17,58;CL:0000187,7.58e-17,55;CL:0000393,1.94e-15,61;CL:0000211,1.94e-15,61;CL:0000192,1.98e-15,43;CL:0000514,1.98e-15,43;CL:0000213,1.47e-14,58;CL:0000215,1.47e-14,58;CL:0002078,1.63e-14,45;CL:0000115,2.54e-14,36;CL:0000359,1.24e-12,32;CL:0002139,6.84e-10,24;CL:0000066,9.20e-10,253;CL:0000071,1.86e-08,18;CL:0002546,1.86e-08,18;CL:0000057,2.45e-08,76;CL:0000034,7.23e-08,441;CL:0000723,9.78e-08,433;CL:0000048,1.35e-07,427;CL:1000449,7.26e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.10e-11;43!CL:0000355;1.10e-09;58!CL:0000222;2.33e-09;121!CL:0002546;1.91e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.65e-21!79;UBERON:0007798!2.65e-21!79;UBERON:0003914!2.02e-18!118;UBERON:0000055!7.35e-18!69;UBERON:0000914!1.61e-17!83;UBERON:0002329!1.61e-17!83;UBERON:0003077!1.61e-17!83;UBERON:0003059!1.61e-17!83;UBERON:0007282!1.61e-17!83;UBERON:0009618!1.61e-17!83;UBERON:0007285!1.61e-17!83;UBERON:0000486!4.72e-17!82;UBERON:0004290!2.98e-16!70;UBERON:0004872!4.97e-16!84;UBERON:0005256!8.16e-16!143;UBERON:0001981!8.29e-16!60;UBERON:0007500!8.29e-16!60;UBERON:0004537!8.29e-16!60;UBERON:0006965!8.29e-16!60;UBERON:0001637!8.44e-16!42;UBERON:0003509!8.44e-16!42;UBERON:0004572!8.44e-16!42;UBERON:0001134!3.57e-15!61;UBERON:0002036!3.57e-15!61;UBERON:0003082!3.57e-15!61;UBERON:0000490!4.15e-15!138;UBERON:0004535!6.00e-14!110;UBERON:0002385!1.06e-13!63;UBERON:0001015!1.06e-13!63;UBERON:0000383!1.06e-13!63;UBERON:0001009!2.94e-13!113;UBERON:0004573!3.15e-12!33;UBERON:0004571!3.15e-12!33;UBERON:0000119!1.84e-09!312;UBERON:0002100!3.76e-09!216;UBERON:0000483!4.41e-09!309;UBERON:0001986!1.86e-08!18;UBERON:0004638!1.86e-08!18;UBERON:0004852!1.86e-08!18;UBERON:0003104!6.62e-08!238;UBERON:0009142!6.62e-08!238;UBERON:0000947!2.52e-07!21;UBERON:0010191!2.52e-07!21;UBERON:0000487!6.02e-07!22;UBERON:0004211!7.82e-07!16;UBERON:0001285!7.82e-07!16;UBERON:0007684!7.82e-07!16;UBERON:0003220!7.82e-07!16;UBERON:0004208!7.82e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.39e-11;42!UBERON:0003509;1.39e-11;42!UBERON:0004572;1.39e-11;42!UBERON:0007500;3.64e-11;56!UBERON:0001981;3.64e-11;56!UBERON:0004537;3.64e-11;56!UBERON:0004573;4.38e-11;33!UBERON:0004571;4.38e-11;33!UBERON:0003914;2.98e-10;74!UBERON:0000055;3.45e-10;65!UBERON:0002049;5.63e-10;75!UBERON:0007798;5.63e-10;75!UBERON:0004638;1.91e-08;18!UBERON:0001986;1.91e-08;18!UBERON:0004852;1.91e-08;18!UBERON:0000947;2.56e-07;21!UBERON:0010191;2.56e-07;21!UBERON:0000353;3.72e-07;15!UBERON:0000487;6.03e-07;22!UBERON:0000490;6.53e-07;33!UBERON:0006555;7.12e-07;15!UBERON:0004819;7.12e-07;15!UBERON:0001285;7.12e-07;15!UBERON:0007684;7.12e-07;15!UBERON:0000025;8.06e-07;93 | |||
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| ||
|short_description=p1@UROD | |||
}} | }} |
Latest revision as of 07:14, 18 September 2015
Short description: | p1@UROD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UROD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372135, ENST00000372139, ENST00000434478, ENST00000460334, ENST00000494399_5end |
EntrezGene: | UROD |
HGNC: | 12591 |
UniProt: | Q5T446 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.30e-32 | 121 |
embryonic cell | 8.06e-30 | 250 |
muscle precursor cell | 3.10e-17 | 58 |
myoblast | 3.10e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-17 | 58 |
muscle cell | 7.58e-17 | 55 |
electrically responsive cell | 1.94e-15 | 61 |
electrically active cell | 1.94e-15 | 61 |
smooth muscle cell | 1.98e-15 | 43 |
smooth muscle myoblast | 1.98e-15 | 43 |
lining cell | 1.47e-14 | 58 |
barrier cell | 1.47e-14 | 58 |
meso-epithelial cell | 1.63e-14 | 45 |
endothelial cell | 2.54e-14 | 36 |
vascular associated smooth muscle cell | 1.24e-12 | 32 |
endothelial cell of vascular tree | 6.84e-10 | 24 |
epithelial cell | 9.20e-10 | 253 |
blood vessel endothelial cell | 1.86e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.86e-08 | 18 |
fibroblast | 2.45e-08 | 76 |
stem cell | 7.23e-08 | 441 |
somatic stem cell | 9.78e-08 | 433 |
multi fate stem cell | 1.35e-07 | 427 |
epithelial cell of nephron | 7.26e-07 | 15 |