FFCP PHASE1:Hg19::chr21:47531348..47531389,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1292 | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2212 | |HGNC=2212 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000397763_5end | |association_with_transcript=0bp_to_ENST00000397763_5end | ||
|cluster_id=chr21:47531348..47531389,+ | |||
|coexpression_cluster_id=C198 | |coexpression_cluster_id=C198 | ||
|description=CAGE_peak_10_at_COL6A2_5end | |description=CAGE_peak_10_at_COL6A2_5end | ||
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|ontology_enrichment_celltype=CL:0000055!9.65e-44!180;CL:0000057!8.13e-26!75;CL:0000680!1.96e-19!57;CL:0000056!1.96e-19!57;CL:0000355!1.96e-19!57;CL:0000187!1.66e-18!54;CL:0000183!3.92e-18!59;CL:0000393!1.49e-16!60;CL:0000211!1.49e-16!60;CL:0000192!4.06e-14!42;CL:0000514!4.06e-14!42;CL:0000048!1.60e-11!430;CL:0000359!8.67e-11!32;CL:0000723!1.81e-10!436;CL:0002620!2.30e-10!23;CL:0000034!7.92e-10!444;CL:0000222!1.43e-07!119;CL:0002570!5.27e-07!8;CL:0000499!8.68e-07!27 | |ontology_enrichment_celltype=CL:0000055!9.65e-44!180;CL:0000057!8.13e-26!75;CL:0000680!1.96e-19!57;CL:0000056!1.96e-19!57;CL:0000355!1.96e-19!57;CL:0000187!1.66e-18!54;CL:0000183!3.92e-18!59;CL:0000393!1.49e-16!60;CL:0000211!1.49e-16!60;CL:0000192!4.06e-14!42;CL:0000514!4.06e-14!42;CL:0000048!1.60e-11!430;CL:0000359!8.67e-11!32;CL:0000723!1.81e-10!436;CL:0002620!2.30e-10!23;CL:0000034!7.92e-10!444;CL:0000222!1.43e-07!119;CL:0002570!5.27e-07!8;CL:0000499!8.68e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.01e-12;23!CL:0000723;4.96e-12;61!CL:0000057;7.49e-12;73!CL:0000134;9.31e-12;55!CL:0000192;1.54e-11;43!CL:0000187;8.41e-11;55!CL:0000048;2.02e-10;58!CL:0002320;5.02e-10;188!CL:0000359;1.08e-09;32!CL:0000393;5.57e-09;61!CL:0000211;5.57e-09;61!CL:0002570;1.39e-08;8!CL:0000034;4.27e-08;69!CL:0002334;6.96e-08;12 | |ontology_enrichment_celltype_v019=CL:0002620;1.01e-12;23!CL:0000723;4.96e-12;61!CL:0000057;7.49e-12;73!CL:0000134;9.31e-12;55!CL:0000192;1.54e-11;43!CL:0000187;8.41e-11;55!CL:0000048;2.02e-10;58!CL:0002320;5.02e-10;188!CL:0000359;1.08e-09;32!CL:0000393;5.57e-09;61!CL:0000211;5.57e-09;61!CL:0002570;1.39e-08;8!CL:0000034;4.27e-08;69!CL:0002334;6.96e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.83e-30,76;CL:0000048,2.75e-20,427;CL:0000680,3.42e-20,58;CL:0000056,3.42e-20,58;CL:0000355,3.42e-20,58;CL:0000723,3.18e-19,433;CL:0000187,5.08e-19,55;CL:0000034,3.12e-18,441;CL:0000393,1.45e-15,61;CL:0000211,1.45e-15,61;CL:0000192,8.63e-15,43;CL:0000514,8.63e-15,43;CL:0002620,4.67e-13,23;CL:0002320,2.27e-10,361;CL:0000359,5.06e-10,32;CL:0002570,1.59e-08,8;CL:0000134,3.16e-08,354;CL:0002334,5.01e-08,12;CL:0000136,9.60e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.54e-11;43!CL:0000355;4.68e-11;58 | |ontology_enrichment_development_v019=CL:0000514;1.54e-11;43!CL:0000355;4.68e-11;58 | ||
|ontology_enrichment_disease=DOID:2394!5.31e-07!14 | |ontology_enrichment_disease=DOID:2394!5.31e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.49e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;8.49e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,9.07e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.85e-25!83;UBERON:0002329!2.85e-25!83;UBERON:0003077!2.85e-25!83;UBERON:0003059!2.85e-25!83;UBERON:0007282!2.85e-25!83;UBERON:0009618!2.85e-25!83;UBERON:0007285!2.85e-25!83;UBERON:0004290!9.16e-24!70;UBERON:0000486!2.32e-19!82;UBERON:0002385!4.15e-19!63;UBERON:0001015!4.15e-19!63;UBERON:0000383!4.15e-19!63;UBERON:0001134!8.61e-19!61;UBERON:0002036!8.61e-19!61;UBERON:0003082!8.61e-19!61;UBERON:0005256!4.37e-15!143;UBERON:0002199!4.16e-11!45;UBERON:0002416!4.16e-11!45;UBERON:0003102!1.27e-10!95;UBERON:0002100!4.18e-10!216;UBERON:0001013!1.44e-09!14;UBERON:0000475!4.20e-09!365;UBERON:0004872!6.06e-09!84;UBERON:0002097!1.65e-08!40;UBERON:0007100!3.03e-08!27;UBERON:0000948!5.53e-08!24;UBERON:0005498!5.53e-08!24;UBERON:0004140!5.53e-08!24;UBERON:0009881!5.53e-08!24;UBERON:0004141!5.53e-08!24;UBERON:0003084!5.53e-08!24;UBERON:0007005!5.53e-08!24;UBERON:0004139!5.53e-08!24;UBERON:0004291!5.53e-08!24;UBERON:0000481!3.61e-07!347;UBERON:0001637!3.91e-07!42;UBERON:0003509!3.91e-07!42;UBERON:0004572!3.91e-07!42;UBERON:0003104!4.15e-07!238;UBERON:0009142!4.15e-07!238;UBERON:0004573!4.33e-07!33;UBERON:0004571!4.33e-07!33;UBERON:0000490!5.37e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!2.85e-25!83;UBERON:0002329!2.85e-25!83;UBERON:0003077!2.85e-25!83;UBERON:0003059!2.85e-25!83;UBERON:0007282!2.85e-25!83;UBERON:0009618!2.85e-25!83;UBERON:0007285!2.85e-25!83;UBERON:0004290!9.16e-24!70;UBERON:0000486!2.32e-19!82;UBERON:0002385!4.15e-19!63;UBERON:0001015!4.15e-19!63;UBERON:0000383!4.15e-19!63;UBERON:0001134!8.61e-19!61;UBERON:0002036!8.61e-19!61;UBERON:0003082!8.61e-19!61;UBERON:0005256!4.37e-15!143;UBERON:0002199!4.16e-11!45;UBERON:0002416!4.16e-11!45;UBERON:0003102!1.27e-10!95;UBERON:0002100!4.18e-10!216;UBERON:0001013!1.44e-09!14;UBERON:0000475!4.20e-09!365;UBERON:0004872!6.06e-09!84;UBERON:0002097!1.65e-08!40;UBERON:0007100!3.03e-08!27;UBERON:0000948!5.53e-08!24;UBERON:0005498!5.53e-08!24;UBERON:0004140!5.53e-08!24;UBERON:0009881!5.53e-08!24;UBERON:0004141!5.53e-08!24;UBERON:0003084!5.53e-08!24;UBERON:0007005!5.53e-08!24;UBERON:0004139!5.53e-08!24;UBERON:0004291!5.53e-08!24;UBERON:0000481!3.61e-07!347;UBERON:0001637!3.91e-07!42;UBERON:0003509!3.91e-07!42;UBERON:0004572!3.91e-07!42;UBERON:0003104!4.15e-07!238;UBERON:0009142!4.15e-07!238;UBERON:0004573!4.33e-07!33;UBERON:0004571!4.33e-07!33;UBERON:0000490!5.37e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.98e-11;14!UBERON:0002199;4.35e-10;46!UBERON:0002416;4.35e-10;46!UBERON:0002384;7.79e-10;198!UBERON:0002385;4.90e-09;31!UBERON:0001015;4.90e-09;31!UBERON:0000383;4.90e-09;31!UBERON:0002097;6.08e-09;41!UBERON:0003102;1.05e-08;50!UBERON:0002067;4.84e-08;9!UBERON:0004573;1.27e-07;33!UBERON:0004571;1.27e-07;33!UBERON:0002204;1.62e-07;70!UBERON:0000948;2.46e-07;22!UBERON:0007100;3.23e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0001013;4.98e-11;14!UBERON:0002199;4.35e-10;46!UBERON:0002416;4.35e-10;46!UBERON:0002384;7.79e-10;198!UBERON:0002385;4.90e-09;31!UBERON:0001015;4.90e-09;31!UBERON:0000383;4.90e-09;31!UBERON:0002097;6.08e-09;41!UBERON:0003102;1.05e-08;50!UBERON:0002067;4.84e-08;9!UBERON:0004573;1.27e-07;33!UBERON:0004571;1.27e-07;33!UBERON:0002204;1.62e-07;70!UBERON:0000948;2.46e-07;22!UBERON:0007100;3.23e-07;25 | ||
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| ||
|short_description=p10@COL6A2 | |short_description=p10@COL6A2 | ||
}} | }} |
Latest revision as of 22:47, 18 September 2015
Short description: | p10@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 0bp_to_ENST00000397763_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.83e-30 | 76 |
multi fate stem cell | 2.75e-20 | 427 |
muscle precursor cell | 3.42e-20 | 58 |
myoblast | 3.42e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.42e-20 | 58 |
somatic stem cell | 3.18e-19 | 433 |
muscle cell | 5.08e-19 | 55 |
stem cell | 3.12e-18 | 441 |
electrically responsive cell | 1.45e-15 | 61 |
electrically active cell | 1.45e-15 | 61 |
smooth muscle cell | 8.63e-15 | 43 |
smooth muscle myoblast | 8.63e-15 | 43 |
skin fibroblast | 4.67e-13 | 23 |
connective tissue cell | 2.27e-10 | 361 |
vascular associated smooth muscle cell | 5.06e-10 | 32 |
mesenchymal stem cell of adipose | 1.59e-08 | 8 |
mesenchymal cell | 3.16e-08 | 354 |
preadipocyte | 5.01e-08 | 12 |
fat cell | 9.60e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.07e-09 | 14 |