FFCP PHASE1:Hg19::chr10:3930116..3930153,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3930116..3930153,- | |||
|coexpression_cluster_id=C151 | |coexpression_cluster_id=C151 | ||
|description=CAGE_peak_at_chr10:3930116..3930153,- | |description=CAGE_peak_at_chr10:3930116..3930153,- | ||
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|ontology_enrichment_celltype_v019=CL:0000860;6.85e-39;33!CL:0002057;6.85e-39;33!CL:0000473;1.75e-29;39!CL:0000234;1.75e-29;39!CL:0000576;3.49e-23;48!CL:0000766;1.14e-20;69!CL:0002087;2.77e-14;104!CL:0000623;1.38e-11;3!CL:0000767;8.22e-11;3!CL:0000763;3.24e-10;100!CL:0000624;8.42e-09;6!CL:0000738;1.87e-08;136!CL:0000791;3.62e-08;18!CL:0000789;3.62e-08;18!CL:0002419;3.62e-08;18!CL:0001014;6.83e-08;2!CL:0001016;6.83e-08;2!CL:0000097;4.96e-07;5!CL:0000094;5.38e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;6.85e-39;33!CL:0002057;6.85e-39;33!CL:0000473;1.75e-29;39!CL:0000234;1.75e-29;39!CL:0000576;3.49e-23;48!CL:0000766;1.14e-20;69!CL:0002087;2.77e-14;104!CL:0000623;1.38e-11;3!CL:0000767;8.22e-11;3!CL:0000763;3.24e-10;100!CL:0000624;8.42e-09;6!CL:0000738;1.87e-08;136!CL:0000791;3.62e-08;18!CL:0000789;3.62e-08;18!CL:0002419;3.62e-08;18!CL:0001014;6.83e-08;2!CL:0001016;6.83e-08;2!CL:0000097;4.96e-07;5!CL:0000094;5.38e-07;8 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.30e-31;42!CL:0000790;3.62e-08;18!CL:0000049;7.64e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.30e-31;42!CL:0000790;3.62e-08;18!CL:0000049;7.64e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-19!80;UBERON:0003081!7.51e-19!216;UBERON:0001474!3.72e-18!86;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0004765!2.15e-15!101;UBERON:0001434!2.15e-15!101;UBERON:0002193!6.63e-15!112;UBERON:0002405!6.25e-14!115;UBERON:0002384!1.23e-13!375;UBERON:0002204!2.83e-10!167 | |ontology_enrichment_uberon=UBERON:0002371!1.15e-19!80;UBERON:0003081!7.51e-19!216;UBERON:0001474!3.72e-18!86;UBERON:0002390!1.91e-16!102;UBERON:0003061!1.91e-16!102;UBERON:0004765!2.15e-15!101;UBERON:0001434!2.15e-15!101;UBERON:0002193!6.63e-15!112;UBERON:0002405!6.25e-14!115;UBERON:0002384!1.23e-13!375;UBERON:0002204!2.83e-10!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.06e-34,76;UBERON:0001474,2.51e-31,82;UBERON:0002390,1.10e-30,98;UBERON:0003061,1.10e-30,98;UBERON:0002405,1.19e-28,93;UBERON:0004765,7.54e-28,90;UBERON:0002193,4.69e-27,108;UBERON:0001434,2.78e-24,100;UBERON:0003081,3.62e-16,203;UBERON:0002204,1.70e-14,167;UBERON:0002384,1.51e-13,371;UBERON:0000926,9.47e-08,315;UBERON:0004120,9.47e-08,315;UBERON:0006603,9.47e-08,315 | |||
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|short_description=p@chr10:3930116..3930153,- | |short_description=p@chr10:3930116..3930153,- | ||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3930116..3930153, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3930116..3930153, - |
Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.06e-34 | 76 |
bone element | 2.51e-31 | 82 |
hematopoietic system | 1.10e-30 | 98 |
blood island | 1.10e-30 | 98 |
immune system | 1.19e-28 | 93 |
skeletal element | 7.54e-28 | 90 |
hemolymphoid system | 4.69e-27 | 108 |
skeletal system | 2.78e-24 | 100 |
lateral plate mesoderm | 3.62e-16 | 203 |
musculoskeletal system | 1.70e-14 | 167 |
connective tissue | 1.51e-13 | 371 |
mesoderm | 9.47e-08 | 315 |
mesoderm-derived structure | 9.47e-08 | 315 |
presumptive mesoderm | 9.47e-08 | 315 |