FFCP PHASE1:Hg19::chr1:154474247..154474267,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126669 | |EntrezGene=126669 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27004 | |HGNC=27004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=321bp_to_uc001ffc.2_5end | |association_with_transcript=321bp_to_uc001ffc.2_5end | ||
|cluster_id=chr1:154474247..154474267,- | |||
|description=CAGE_peak_2_at_SHE_5end | |description=CAGE_peak_2_at_SHE_5end | ||
|id=chr1:154474247..154474267,- | |id=chr1:154474247..154474267,- | ||
|ontology_enrichment_celltype=CL:0000115!2.14e-25!35;CL:0002139!5.33e-24!24;CL:0002078!7.07e-19!44;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000213!5.58e-12!57;CL:0000215!5.58e-12!57;CL:1000413!2.82e-10!9;CL:0005020!8.05e-08!6;CL:0002138!8.05e-08!6;CL:0005022!8.05e-08!6;CL:0002544!3.19e-07!6;CL:0002543!6.86e-07!6 | |ontology_enrichment_celltype=CL:0000115!2.14e-25!35;CL:0002139!5.33e-24!24;CL:0002078!7.07e-19!44;CL:0000071!9.36e-18!18;CL:0002546!9.36e-18!18;CL:0000213!5.58e-12!57;CL:0000215!5.58e-12!57;CL:1000413!2.82e-10!9;CL:0005020!8.05e-08!6;CL:0002138!8.05e-08!6;CL:0005022!8.05e-08!6;CL:0002544!3.19e-07!6;CL:0002543!6.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;5.39e-30;36!CL:0002139;4.35e-28;24!CL:0000071;3.33e-18;18!CL:0002078;6.29e-18;45!CL:1000413;4.66e-13;9!CL:0002138;5.38e-12;6!CL:0000213;1.70e-10;58!CL:0000215;1.70e-10;58!CL:0002544;3.87e-08;6!CL:0002543;7.51e-08;6!CL:0002618;5.44e-07;3 | |ontology_enrichment_celltype_v019=CL:0000115;5.39e-30;36!CL:0002139;4.35e-28;24!CL:0000071;3.33e-18;18!CL:0002078;6.29e-18;45!CL:1000413;4.66e-13;9!CL:0002138;5.38e-12;6!CL:0000213;1.70e-10;58!CL:0000215;1.70e-10;58!CL:0002544;3.87e-08;6!CL:0002543;7.51e-08;6!CL:0002618;5.44e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.54e-35,36;CL:0002139,3.41e-28,24;CL:0002078,4.92e-26,45;CL:0000071,2.69e-18,18;CL:0002546,2.69e-18,18;CL:0000213,2.93e-18,58;CL:0000215,2.93e-18,58;CL:1000413,2.92e-13,9;CL:0005020,5.31e-12,6;CL:0002138,5.31e-12,6;CL:0005022,5.31e-12,6;CL:0002544,2.77e-08,6;CL:0002543,9.41e-08,6;CL:0002618,5.43e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;3.33e-18;18!CL:0005022;5.38e-12;6 | |ontology_enrichment_development_v019=CL:0002546;3.33e-18;18!CL:0005022;5.38e-12;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.45e-64!115;UBERON:0000477!2.33e-23!286;UBERON:0004111!2.85e-22!241;UBERON:0000025!2.00e-18!194;UBERON:0001986!9.36e-18!18;UBERON:0004638!9.36e-18!18;UBERON:0004852!9.36e-18!18;UBERON:0001049!2.63e-17!57;UBERON:0005068!2.63e-17!57;UBERON:0006241!2.63e-17!57;UBERON:0007135!2.63e-17!57;UBERON:0002616!2.97e-14!59;UBERON:0003080!3.05e-14!42;UBERON:0002780!2.44e-13!41;UBERON:0001890!2.44e-13!41;UBERON:0006240!2.44e-13!41;UBERON:0000487!2.53e-13!22;UBERON:0000467!5.49e-13!625;UBERON:0000480!6.98e-13!626;UBERON:0003075!7.00e-13!86;UBERON:0007284!7.00e-13!86;UBERON:0000468!9.24e-13!659;UBERON:0006914!4.01e-12!25;UBERON:0000955!5.68e-12!69;UBERON:0006238!5.68e-12!69;UBERON:0002020!9.35e-12!34;UBERON:0003528!9.35e-12!34;UBERON:0002346!1.07e-11!90;UBERON:0001893!1.63e-11!34;UBERON:0001017!3.04e-11!82;UBERON:0002791!4.48e-11!33;UBERON:0005743!6.79e-11!86;UBERON:0001869!2.12e-10!32;UBERON:0003915!2.82e-10!9;UBERON:0004700!2.82e-10!9;UBERON:0001917!2.82e-10!9;UBERON:0000073!1.89e-09!94;UBERON:0001016!1.89e-09!94;UBERON:0001009!2.56e-09!113;UBERON:0000483!3.77e-09!309;UBERON:0000922!3.87e-09!612;UBERON:0002050!6.12e-09!605;UBERON:0005423!6.12e-09!605;UBERON:0000119!8.13e-09!312;UBERON:0000923!1.14e-08!604;UBERON:0005291!1.14e-08!604;UBERON:0006598!1.14e-08!604;UBERON:0002532!1.14e-08!604;UBERON:0000062!2.58e-08!511;UBERON:0004872!3.96e-08!84;UBERON:0000055!4.28e-08!69;UBERON:0002619!6.97e-08!22;UBERON:0002420!7.13e-08!9;UBERON:0007245!7.13e-08!9;UBERON:0010009!7.13e-08!9;UBERON:0010011!7.13e-08!9;UBERON:0000454!7.13e-08!9;UBERON:0002308!7.27e-08!9;UBERON:0000125!7.27e-08!9;UBERON:0004535!7.73e-08!110;UBERON:0003056!8.46e-08!61;UBERON:0002298!1.07e-07!8;UBERON:0000153!1.11e-07!129;UBERON:0007811!1.11e-07!129;UBERON:0002465!4.03e-07!10;UBERON:0003103!6.73e-07!69;UBERON:0001950!7.22e-07!20;UBERON:0000064!7.36e-07!219;UBERON:0000033!9.36e-07!123;UBERON:0007100!9.42e-07!27 | |ontology_enrichment_uberon=UBERON:0007023!5.45e-64!115;UBERON:0000477!2.33e-23!286;UBERON:0004111!2.85e-22!241;UBERON:0000025!2.00e-18!194;UBERON:0001986!9.36e-18!18;UBERON:0004638!9.36e-18!18;UBERON:0004852!9.36e-18!18;UBERON:0001049!2.63e-17!57;UBERON:0005068!2.63e-17!57;UBERON:0006241!2.63e-17!57;UBERON:0007135!2.63e-17!57;UBERON:0002616!2.97e-14!59;UBERON:0003080!3.05e-14!42;UBERON:0002780!2.44e-13!41;UBERON:0001890!2.44e-13!41;UBERON:0006240!2.44e-13!41;UBERON:0000487!2.53e-13!22;UBERON:0000467!5.49e-13!625;UBERON:0000480!6.98e-13!626;UBERON:0003075!7.00e-13!86;UBERON:0007284!7.00e-13!86;UBERON:0000468!9.24e-13!659;UBERON:0006914!4.01e-12!25;UBERON:0000955!5.68e-12!69;UBERON:0006238!5.68e-12!69;UBERON:0002020!9.35e-12!34;UBERON:0003528!9.35e-12!34;UBERON:0002346!1.07e-11!90;UBERON:0001893!1.63e-11!34;UBERON:0001017!3.04e-11!82;UBERON:0002791!4.48e-11!33;UBERON:0005743!6.79e-11!86;UBERON:0001869!2.12e-10!32;UBERON:0003915!2.82e-10!9;UBERON:0004700!2.82e-10!9;UBERON:0001917!2.82e-10!9;UBERON:0000073!1.89e-09!94;UBERON:0001016!1.89e-09!94;UBERON:0001009!2.56e-09!113;UBERON:0000483!3.77e-09!309;UBERON:0000922!3.87e-09!612;UBERON:0002050!6.12e-09!605;UBERON:0005423!6.12e-09!605;UBERON:0000119!8.13e-09!312;UBERON:0000923!1.14e-08!604;UBERON:0005291!1.14e-08!604;UBERON:0006598!1.14e-08!604;UBERON:0002532!1.14e-08!604;UBERON:0000062!2.58e-08!511;UBERON:0004872!3.96e-08!84;UBERON:0000055!4.28e-08!69;UBERON:0002619!6.97e-08!22;UBERON:0002420!7.13e-08!9;UBERON:0007245!7.13e-08!9;UBERON:0010009!7.13e-08!9;UBERON:0010011!7.13e-08!9;UBERON:0000454!7.13e-08!9;UBERON:0002308!7.27e-08!9;UBERON:0000125!7.27e-08!9;UBERON:0004535!7.73e-08!110;UBERON:0003056!8.46e-08!61;UBERON:0002298!1.07e-07!8;UBERON:0000153!1.11e-07!129;UBERON:0007811!1.11e-07!129;UBERON:0002465!4.03e-07!10;UBERON:0003103!6.73e-07!69;UBERON:0001950!7.22e-07!20;UBERON:0000064!7.36e-07!219;UBERON:0000033!9.36e-07!123;UBERON:0007100!9.42e-07!27 | ||
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| ||
|short_description=p2@SHE | |short_description=p2@SHE | ||
}} | }} |
Latest revision as of 09:27, 17 September 2015
Short description: | p2@SHE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHE_5end |
Coexpression cluster: | NA |
Association with transcript: | 321bp_to_uc001ffc.2_5end |
EntrezGene: | SHE |
HGNC: | 27004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.54e-35 | 36 |
endothelial cell of vascular tree | 3.41e-28 | 24 |
meso-epithelial cell | 4.92e-26 | 45 |
blood vessel endothelial cell | 2.69e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.69e-18 | 18 |
lining cell | 2.93e-18 | 58 |
barrier cell | 2.93e-18 | 58 |
endothelial cell of artery | 2.92e-13 | 9 |
lymphangioblast | 5.31e-12 | 6 |
endothelial cell of lymphatic vessel | 5.31e-12 | 6 |
vascular lymphangioblast | 5.31e-12 | 6 |
aortic endothelial cell | 2.77e-08 | 6 |
vein endothelial cell | 9.41e-08 | 6 |
endothelial cell of umbilical vein | 5.43e-07 | 3 |