FFCP PHASE1:Hg19::chr13:98795361..98795384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10160 | |EntrezGene=10160 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3591 | |HGNC=3591 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | |UniProt=E9PCB0,C9JME2,Q5JVI9,Q9Y4F1 | ||
|association_with_transcript=-49bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | |association_with_transcript=-49bp_to_ENST00000376581,ENST00000376584,ENST00000376586,NM_001001715,NM_005766,uc001vni.2,uc001vnj.2_5end | ||
|cluster_id=chr13:98795361..98795384,+ | |||
|description=CAGE_peak_2_at_FARP1_5end | |description=CAGE_peak_2_at_FARP1_5end | ||
|id=chr13:98795361..98795384,+ | |id=chr13:98795361..98795384,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.83e-15!180;CL:0002321!5.00e-13!248;CL:0000220!8.90e-13!246;CL:1000449!6.45e-09!16;CL:1000497!9.52e-09!18;CL:0002518!9.52e-09!18;CL:1000507!1.67e-07!12;CL:1000494!1.67e-07!12;CL:0000133!1.81e-07!59;CL:0002681!3.89e-07!13;CL:0002584!3.89e-07!13;CL:0000333!5.04e-07!41 | |ontology_enrichment_celltype=CL:0000055!5.83e-15!180;CL:0002321!5.00e-13!248;CL:0000220!8.90e-13!246;CL:1000449!6.45e-09!16;CL:1000497!9.52e-09!18;CL:0002518!9.52e-09!18;CL:1000507!1.67e-07!12;CL:1000494!1.67e-07!12;CL:0000133!1.81e-07!59;CL:0002681!3.89e-07!13;CL:0002584!3.89e-07!13;CL:0000333!5.04e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.28e-09;15!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:1000507;5.90e-08;10!CL:1000494;5.90e-08;10!CL:0002681;8.91e-08;12!CL:0002584;8.91e-08;12 | |ontology_enrichment_celltype_v019=CL:1000449;1.28e-09;15!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:1000507;5.90e-08;10!CL:1000494;5.90e-08;10!CL:0002681;8.91e-08;12!CL:0002584;8.91e-08;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.20e-12,250;CL:1000449,1.33e-09,15;CL:1000497,2.36e-09,17;CL:0002518,2.36e-09,17;CL:1000507,6.63e-08,10;CL:1000494,6.63e-08,10;CL:0002681,8.77e-08,12;CL:0002584,8.77e-08,12;CL:0000133,2.17e-07,59;CL:0000057,6.30e-07,76;CL:0000333,6.36e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.82e-23!365;UBERON:0000119!3.36e-23!312;UBERON:0000483!1.96e-22!309;UBERON:0000481!2.81e-22!347;UBERON:0000477!7.38e-17!286;UBERON:0004111!2.74e-15!241;UBERON:0000025!1.30e-14!194;UBERON:0005256!1.39e-14!143;UBERON:0000468!4.52e-14!659;UBERON:0002100!1.69e-13!216;UBERON:0000064!5.77e-13!219;UBERON:0003104!3.30e-12!238;UBERON:0009142!3.30e-12!238;UBERON:0000467!2.17e-11!625;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0000480!4.12e-11!626;UBERON:0002417!4.69e-11!61;UBERON:0000916!4.69e-11!61;UBERON:0005177!6.58e-11!107;UBERON:0000922!8.63e-11!612;UBERON:0000466!2.03e-10!126;UBERON:0004121!4.31e-10!169;UBERON:0009569!9.05e-10!113;UBERON:0000924!9.08e-10!173;UBERON:0006601!9.08e-10!173;UBERON:0002050!9.44e-10!605;UBERON:0005423!9.44e-10!605;UBERON:0000490!1.35e-09!138;UBERON:0001008!1.46e-09!45;UBERON:0000923!1.56e-09!604;UBERON:0005291!1.56e-09!604;UBERON:0006598!1.56e-09!604;UBERON:0002532!1.56e-09!604;UBERON:0003914!1.75e-09!118;UBERON:0003064!2.13e-09!37;UBERON:0006554!2.14e-09!44;UBERON:0000073!3.35e-09!94;UBERON:0001016!3.35e-09!94;UBERON:0004876!6.28e-09!20;UBERON:0006555!6.31e-09!17;UBERON:0005103!6.31e-09!17;UBERON:0000083!6.31e-09!17;UBERON:0009201!6.31e-09!17;UBERON:0004819!6.31e-09!17;UBERON:0006553!6.31e-09!17;UBERON:0003074!6.31e-09!17;UBERON:0003060!6.31e-09!17;UBERON:0004211!6.45e-09!16;UBERON:0001285!6.45e-09!16;UBERON:0007684!6.45e-09!16;UBERON:0003220!6.45e-09!16;UBERON:0004208!6.45e-09!16;UBERON:0000353!7.14e-09!17;UBERON:0000080!7.76e-09!18;UBERON:0002120!7.76e-09!18;UBERON:0004875!7.76e-09!18;UBERON:0005721!7.76e-09!18;UBERON:0005754!7.76e-09!18;UBERON:0007297!7.76e-09!18;UBERON:0000058!2.28e-08!26;UBERON:0000489!4.42e-08!32;UBERON:0003887!7.62e-08!21;UBERON:0003075!9.29e-08!86;UBERON:0007284!9.29e-08!86;UBERON:0005743!1.00e-07!86;UBERON:0001017!1.25e-07!82;UBERON:0009773!1.67e-07!12;UBERON:0001231!1.67e-07!12;UBERON:0004810!1.67e-07!12;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0002346!2.55e-07!90;UBERON:0000033!3.40e-07!123;UBERON:0001225!3.89e-07!13;UBERON:0008987!3.89e-07!13;UBERON:0002107!5.90e-07!19;UBERON:0006925!5.90e-07!19;UBERON:0008836!5.90e-07!19 | |ontology_enrichment_uberon=UBERON:0000475!1.82e-23!365;UBERON:0000119!3.36e-23!312;UBERON:0000483!1.96e-22!309;UBERON:0000481!2.81e-22!347;UBERON:0000477!7.38e-17!286;UBERON:0004111!2.74e-15!241;UBERON:0000025!1.30e-14!194;UBERON:0005256!1.39e-14!143;UBERON:0000468!4.52e-14!659;UBERON:0002100!1.69e-13!216;UBERON:0000064!5.77e-13!219;UBERON:0003104!3.30e-12!238;UBERON:0009142!3.30e-12!238;UBERON:0000467!2.17e-11!625;UBERON:0005172!2.32e-11!55;UBERON:0005173!2.32e-11!55;UBERON:0000480!4.12e-11!626;UBERON:0002417!4.69e-11!61;UBERON:0000916!4.69e-11!61;UBERON:0005177!6.58e-11!107;UBERON:0000922!8.63e-11!612;UBERON:0000466!2.03e-10!126;UBERON:0004121!4.31e-10!169;UBERON:0009569!9.05e-10!113;UBERON:0000924!9.08e-10!173;UBERON:0006601!9.08e-10!173;UBERON:0002050!9.44e-10!605;UBERON:0005423!9.44e-10!605;UBERON:0000490!1.35e-09!138;UBERON:0001008!1.46e-09!45;UBERON:0000923!1.56e-09!604;UBERON:0005291!1.56e-09!604;UBERON:0006598!1.56e-09!604;UBERON:0002532!1.56e-09!604;UBERON:0003914!1.75e-09!118;UBERON:0003064!2.13e-09!37;UBERON:0006554!2.14e-09!44;UBERON:0000073!3.35e-09!94;UBERON:0001016!3.35e-09!94;UBERON:0004876!6.28e-09!20;UBERON:0006555!6.31e-09!17;UBERON:0005103!6.31e-09!17;UBERON:0000083!6.31e-09!17;UBERON:0009201!6.31e-09!17;UBERON:0004819!6.31e-09!17;UBERON:0006553!6.31e-09!17;UBERON:0003074!6.31e-09!17;UBERON:0003060!6.31e-09!17;UBERON:0004211!6.45e-09!16;UBERON:0001285!6.45e-09!16;UBERON:0007684!6.45e-09!16;UBERON:0003220!6.45e-09!16;UBERON:0004208!6.45e-09!16;UBERON:0000353!7.14e-09!17;UBERON:0000080!7.76e-09!18;UBERON:0002120!7.76e-09!18;UBERON:0004875!7.76e-09!18;UBERON:0005721!7.76e-09!18;UBERON:0005754!7.76e-09!18;UBERON:0007297!7.76e-09!18;UBERON:0000058!2.28e-08!26;UBERON:0000489!4.42e-08!32;UBERON:0003887!7.62e-08!21;UBERON:0003075!9.29e-08!86;UBERON:0007284!9.29e-08!86;UBERON:0005743!1.00e-07!86;UBERON:0001017!1.25e-07!82;UBERON:0009773!1.67e-07!12;UBERON:0001231!1.67e-07!12;UBERON:0004810!1.67e-07!12;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0002346!2.55e-07!90;UBERON:0000033!3.40e-07!123;UBERON:0001225!3.89e-07!13;UBERON:0008987!3.89e-07!13;UBERON:0002107!5.90e-07!19;UBERON:0006925!5.90e-07!19;UBERON:0008836!5.90e-07!19 | ||
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| ||
|short_description=p2@FARP1 | |short_description=p2@FARP1 | ||
}} | }} |
Latest revision as of 07:09, 18 September 2015
Short description: | p2@FARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000376581, ENST00000376584, ENST00000376586, NM_001001715, NM_005766, uc001vni.2, uc001vnj.2_5end |
EntrezGene: | FARP1 |
HGNC: | 3591 |
UniProt: | E9PCB0C9JME2Q5JVI9Q9Y4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.20e-12 | 250 |
epithelial cell of nephron | 1.33e-09 | 15 |
kidney cell | 2.36e-09 | 17 |
kidney epithelial cell | 2.36e-09 | 17 |
kidney tubule cell | 6.63e-08 | 10 |
nephron tubule epithelial cell | 6.63e-08 | 10 |
kidney cortical cell | 8.77e-08 | 12 |
renal cortical epithelial cell | 8.77e-08 | 12 |
neurectodermal cell | 2.17e-07 | 59 |
fibroblast | 6.30e-07 | 76 |
migratory neural crest cell | 6.36e-07 | 41 |