FFCP PHASE1:Hg19::chr6:34524025..34524045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25803 | |EntrezGene=25803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17257 | |HGNC=17257 | ||
|TSSclassifier=strong | |||
|UniProt=O95238 | |UniProt=O95238 | ||
|association_with_transcript=45bp_to_ENST00000374037,uc003ojq.1,uc011dsq.1_5end | |association_with_transcript=45bp_to_ENST00000374037,uc003ojq.1,uc011dsq.1_5end | ||
|cluster_id=chr6:34524025..34524045,- | |||
|coexpression_cluster_id=C37 | |coexpression_cluster_id=C37 | ||
|description=CAGE_peak_3_at_SPDEF_5end | |description=CAGE_peak_3_at_SPDEF_5end | ||
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|ontology_enrichment_celltype=CL:0002368!2.71e-24!13;CL:0002076!1.16e-23!43;CL:0000066!4.57e-16!254;CL:0002202!6.47e-16!9;CL:0002632!6.47e-16!9;CL:0000223!2.50e-15!59;CL:0000244!1.86e-10!4;CL:0000731!1.86e-10!4;CL:0000068!2.41e-08!3;CL:0000069!2.41e-08!3;CL:0000307!2.41e-08!3;CL:0000377!2.41e-08!3;CL:0002328!2.90e-08!3;CL:0002621!5.71e-07!3 | |ontology_enrichment_celltype=CL:0002368!2.71e-24!13;CL:0002076!1.16e-23!43;CL:0000066!4.57e-16!254;CL:0002202!6.47e-16!9;CL:0002632!6.47e-16!9;CL:0000223!2.50e-15!59;CL:0000244!1.86e-10!4;CL:0000731!1.86e-10!4;CL:0000068!2.41e-08!3;CL:0000069!2.41e-08!3;CL:0000307!2.41e-08!3;CL:0000377!2.41e-08!3;CL:0002328!2.90e-08!3;CL:0002621!5.71e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.49e-32;13!CL:0000244;3.46e-18;4!CL:0000731;3.46e-18;4!CL:0002076;7.48e-18;42!CL:0002202;1.79e-17;9!CL:0002632;1.79e-17;9!CL:0000307;3.12e-14;3!CL:0002328;4.41e-14;3 | |ontology_enrichment_celltype_v019=CL:0002368;3.49e-32;13!CL:0000244;3.46e-18;4!CL:0000731;3.46e-18;4!CL:0002076;7.48e-18;42!CL:0002202;1.79e-17;9!CL:0002632;1.79e-17;9!CL:0000307;3.12e-14;3!CL:0002328;4.41e-14;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.61e-32,13;CL:0002076,2.68e-22,42;CL:0000244,3.54e-18,4;CL:0000731,3.54e-18,4;CL:0002202,1.79e-17,9;CL:0002632,1.79e-17,9;CL:0000223,4.29e-15,58;CL:0000066,1.81e-14,253;CL:0000068,3.12e-14,3;CL:0000069,3.12e-14,3;CL:0000307,3.12e-14,3;CL:0000377,3.12e-14,3;CL:0002328,4.41e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000377;3.12e-14;3!UBERON:0009847;1.03e-12;3!UBERON:0003353;1.03e-12;3!CL:0000223;4.68e-09;58 | |ontology_enrichment_development_v019=CL:0000377;3.12e-14;3!UBERON:0009847;1.03e-12;3!UBERON:0003353;1.03e-12;3!CL:0000223;4.68e-09;58 | ||
|ontology_enrichment_disease=DOID:5093!8.83e-10!4;DOID:1612!8.83e-10!4 | |ontology_enrichment_disease=DOID:5093!8.83e-10!4;DOID:1612!8.83e-10!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;6.80e-17;4!DOID:1612;6.80e-17;4 | |ontology_enrichment_disease_v019=DOID:5093;6.80e-17;4!DOID:1612;6.80e-17;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,6.53e-17,4;DOID:1612,6.53e-17,4 | |||
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| ||
|short_description=p3@SPDEF | |short_description=p3@SPDEF | ||
}} | }} |
Latest revision as of 09:34, 18 September 2015
Short description: | p3@SPDEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPDEF_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 45bp_to_ENST00000374037, uc003ojq.1, uc011dsq.1_5end |
EntrezGene: | SPDEF |
HGNC: | 17257 |
UniProt: | O95238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 3.61e-32 | 13 |
endo-epithelial cell | 2.68e-22 | 42 |
transitional epithelial cell | 3.54e-18 | 4 |
urothelial cell | 3.54e-18 | 4 |
epithelial cell of tracheobronchial tree | 1.79e-17 | 9 |
epithelial cell of lower respiratory tract | 1.79e-17 | 9 |
endodermal cell | 4.29e-15 | 58 |
epithelial cell | 1.81e-14 | 253 |
duct epithelial cell | 3.12e-14 | 3 |
branched duct epithelial cell | 3.12e-14 | 3 |
tracheal epithelial cell | 3.12e-14 | 3 |
tracheoblast | 3.12e-14 | 3 |
bronchial epithelial cell | 4.41e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.53e-17 | 4 |
breast cancer | 6.53e-17 | 4 |