FFCP PHASE1:Hg19::chr17:9548845..9548884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124739 | |EntrezGene=124739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20072 | |HGNC=20072 | ||
|TSSclassifier=strong | |||
|UniProt=Q70EL4 | |UniProt=Q70EL4 | ||
|association_with_transcript=-65bp_to_ENST00000285199,NM_153210,uc010cod.2,uc010vva.1_5end | |association_with_transcript=-65bp_to_ENST00000285199,NM_153210,uc010cod.2,uc010vva.1_5end | ||
|cluster_id=chr17:9548845..9548884,+ | |||
|description=CAGE_peak_1_at_USP43_5end | |description=CAGE_peak_1_at_USP43_5end | ||
|id=chr17:9548845..9548884,+ | |id=chr17:9548845..9548884,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.04e-40!254;CL:0002076!5.63e-17!43;CL:0000223!1.76e-15!59;CL:0002368!1.02e-09!13;CL:0000082!4.32e-07!19;CL:0000039!9.23e-07!7;CL:0000586!9.23e-07!7 | |ontology_enrichment_celltype=CL:0000066!1.04e-40!254;CL:0002076!5.63e-17!43;CL:0000223!1.76e-15!59;CL:0002368!1.02e-09!13;CL:0000082!4.32e-07!19;CL:0000039!9.23e-07!7;CL:0000586!9.23e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.96e-17;42!CL:0002368;3.88e-13;13!CL:0000039;9.47e-09;7!CL:0000586;9.47e-09;7!CL:0002202;1.56e-08;9!CL:0002632;1.56e-08;9!CL:0002251;2.44e-08;20!CL:1000507;5.21e-07;10!CL:1000494;5.21e-07;10 | |ontology_enrichment_celltype_v019=CL:0002076;2.96e-17;42!CL:0002368;3.88e-13;13!CL:0000039;9.47e-09;7!CL:0000586;9.47e-09;7!CL:0002202;1.56e-08;9!CL:0002632;1.56e-08;9!CL:0002251;2.44e-08;20!CL:1000507;5.21e-07;10!CL:1000494;5.21e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-36,253;CL:0002076,2.85e-22,42;CL:0000223,1.86e-19,58;CL:0002368,3.85e-13,13;CL:0000039,8.92e-09,7;CL:0000586,8.92e-09,7;CL:0002202,1.69e-08,9;CL:0002632,1.69e-08,9;CL:0002251,2.02e-08,20;CL:1000507,4.62e-07,10;CL:1000494,4.62e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000223;7.10e-11;58!UBERON:0008947;2.51e-09;29!UBERON:0006595;4.67e-08;86 | |ontology_enrichment_development_v019=CL:0000223;7.10e-11;58!UBERON:0008947;2.51e-09;29!UBERON:0006595;4.67e-08;86 | ||
|ontology_enrichment_disease=DOID:305!4.79e-28!106;DOID:0050687!1.44e-19!143;DOID:1749!1.43e-10!14;DOID:299!1.23e-07!25;DOID:162!2.42e-07!235 | |ontology_enrichment_disease=DOID:305!4.79e-28!106;DOID:0050687!1.44e-19!143;DOID:1749!1.43e-10!14;DOID:299!1.23e-07!25;DOID:162!2.42e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.33e-14;14!DOID:299;2.26e-08;25!DOID:305;4.35e-08;106 | |ontology_enrichment_disease_v019=DOID:1749;5.33e-14;14!DOID:299;2.26e-08;25!DOID:305;4.35e-08;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.24e-23,106;DOID:0050687,2.23e-17,143;DOID:1749,4.79e-14,14;DOID:299,1.81e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.20e-26!169;UBERON:0000925!1.20e-26!169;UBERON:0006595!1.20e-26!169;UBERON:0001007!4.75e-21!155;UBERON:0001555!4.75e-21!155;UBERON:0007026!4.75e-21!155;UBERON:0000064!1.76e-19!219;UBERON:0004921!3.20e-18!129;UBERON:0004185!3.20e-18!129;UBERON:0001004!1.56e-17!72;UBERON:0000062!3.68e-17!511;UBERON:0000077!4.34e-16!130;UBERON:0000065!1.10e-15!53;UBERON:0000481!1.89e-14!347;UBERON:0008947!4.43e-14!38;UBERON:0003258!4.43e-14!38;UBERON:0005911!7.47e-14!82;UBERON:0000466!1.78e-12!126;UBERON:0001041!2.93e-12!98;UBERON:0005177!6.28e-12!107;UBERON:0000464!7.68e-12!104;UBERON:0000072!1.06e-11!46;UBERON:0001008!4.65e-11!45;UBERON:0006554!8.24e-11!44;UBERON:0000063!1.77e-10!97;UBERON:0005153!2.01e-10!37;UBERON:0000922!4.03e-10!612;UBERON:0001048!4.77e-10!168;UBERON:0009569!2.52e-09!113;UBERON:0000468!3.08e-09!659;UBERON:0005178!4.33e-09!34;UBERON:0002224!4.33e-09!34;UBERON:0005181!1.40e-08!35;UBERON:0000467!1.56e-08!625;UBERON:0000480!2.02e-08!626;UBERON:0005157!2.27e-08!51;UBERON:0002048!2.68e-08!22;UBERON:0000117!2.68e-08!22;UBERON:0000171!2.68e-08!22;UBERON:0000170!2.68e-08!22;UBERON:0005597!2.68e-08!22;UBERON:0000118!2.68e-08!22;UBERON:0002050!3.60e-08!605;UBERON:0005423!3.60e-08!605;UBERON:0000923!5.68e-08!604;UBERON:0005291!5.68e-08!604;UBERON:0006598!5.68e-08!604;UBERON:0002532!5.68e-08!604;UBERON:0000475!7.91e-08!365;UBERON:0000058!1.05e-07!26;UBERON:0002113!1.21e-07!27;UBERON:0003918!1.21e-07!27;UBERON:0005095!1.21e-07!27;UBERON:0007687!1.21e-07!27;UBERON:0004802!4.32e-07!19;UBERON:0000115!4.32e-07!19;UBERON:0004807!6.83e-07!28;UBERON:0000153!9.12e-07!129;UBERON:0007811!9.12e-07!129 | |ontology_enrichment_uberon=UBERON:0004119!1.20e-26!169;UBERON:0000925!1.20e-26!169;UBERON:0006595!1.20e-26!169;UBERON:0001007!4.75e-21!155;UBERON:0001555!4.75e-21!155;UBERON:0007026!4.75e-21!155;UBERON:0000064!1.76e-19!219;UBERON:0004921!3.20e-18!129;UBERON:0004185!3.20e-18!129;UBERON:0001004!1.56e-17!72;UBERON:0000062!3.68e-17!511;UBERON:0000077!4.34e-16!130;UBERON:0000065!1.10e-15!53;UBERON:0000481!1.89e-14!347;UBERON:0008947!4.43e-14!38;UBERON:0003258!4.43e-14!38;UBERON:0005911!7.47e-14!82;UBERON:0000466!1.78e-12!126;UBERON:0001041!2.93e-12!98;UBERON:0005177!6.28e-12!107;UBERON:0000464!7.68e-12!104;UBERON:0000072!1.06e-11!46;UBERON:0001008!4.65e-11!45;UBERON:0006554!8.24e-11!44;UBERON:0000063!1.77e-10!97;UBERON:0005153!2.01e-10!37;UBERON:0000922!4.03e-10!612;UBERON:0001048!4.77e-10!168;UBERON:0009569!2.52e-09!113;UBERON:0000468!3.08e-09!659;UBERON:0005178!4.33e-09!34;UBERON:0002224!4.33e-09!34;UBERON:0005181!1.40e-08!35;UBERON:0000467!1.56e-08!625;UBERON:0000480!2.02e-08!626;UBERON:0005157!2.27e-08!51;UBERON:0002048!2.68e-08!22;UBERON:0000117!2.68e-08!22;UBERON:0000171!2.68e-08!22;UBERON:0000170!2.68e-08!22;UBERON:0005597!2.68e-08!22;UBERON:0000118!2.68e-08!22;UBERON:0002050!3.60e-08!605;UBERON:0005423!3.60e-08!605;UBERON:0000923!5.68e-08!604;UBERON:0005291!5.68e-08!604;UBERON:0006598!5.68e-08!604;UBERON:0002532!5.68e-08!604;UBERON:0000475!7.91e-08!365;UBERON:0000058!1.05e-07!26;UBERON:0002113!1.21e-07!27;UBERON:0003918!1.21e-07!27;UBERON:0005095!1.21e-07!27;UBERON:0007687!1.21e-07!27;UBERON:0004802!4.32e-07!19;UBERON:0000115!4.32e-07!19;UBERON:0004807!6.83e-07!28;UBERON:0000153!9.12e-07!129;UBERON:0007811!9.12e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;7.77e-13;44!UBERON:0000072;7.55e-10;37!UBERON:0001004;3.33e-09;65!UBERON:0006554;3.79e-09;30!UBERON:0001008;3.79e-09;30!UBERON:0005911;7.12e-08;36!UBERON:0001737;8.13e-08;9!UBERON:0001557;8.13e-08;9!UBERON:0004807;9.03e-08;22!UBERON:0005178;1.13e-07;34!UBERON:0002224;1.13e-07;34!UBERON:0004211;5.21e-07;10!UBERON:0009773;5.21e-07;10!UBERON:0001231;5.21e-07;10!UBERON:0004810;5.21e-07;10!UBERON:0002048;5.78e-07;22!UBERON:0000117;5.78e-07;22!UBERON:0000171;5.78e-07;22!UBERON:0000170;5.78e-07;22!UBERON:0005181;8.92e-07;35 | |ontology_enrichment_uberon_v019=UBERON:0000065;7.77e-13;44!UBERON:0000072;7.55e-10;37!UBERON:0001004;3.33e-09;65!UBERON:0006554;3.79e-09;30!UBERON:0001008;3.79e-09;30!UBERON:0005911;7.12e-08;36!UBERON:0001737;8.13e-08;9!UBERON:0001557;8.13e-08;9!UBERON:0004807;9.03e-08;22!UBERON:0005178;1.13e-07;34!UBERON:0002224;1.13e-07;34!UBERON:0004211;5.21e-07;10!UBERON:0009773;5.21e-07;10!UBERON:0001231;5.21e-07;10!UBERON:0004810;5.21e-07;10!UBERON:0002048;5.78e-07;22!UBERON:0000117;5.78e-07;22!UBERON:0000171;5.78e-07;22!UBERON:0000170;5.78e-07;22!UBERON:0005181;8.92e-07;35 | ||
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| ||
|short_description=p1@USP43 | |short_description=p1@USP43 | ||
}} | }} |
Latest revision as of 16:59, 18 September 2015
Short description: | p1@USP43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP43_5end |
Coexpression cluster: | NA |
Association with transcript: | -65bp_to_ENST00000285199, NM_153210, uc010cod.2, uc010vva.1_5end |
EntrezGene: | USP43 |
HGNC: | 20072 |
UniProt: | Q70EL4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-36 | 253 |
endo-epithelial cell | 2.85e-22 | 42 |
endodermal cell | 1.86e-19 | 58 |
respiratory epithelial cell | 3.85e-13 | 13 |
germ line cell | 8.92e-09 | 7 |
germ cell | 8.92e-09 | 7 |
epithelial cell of tracheobronchial tree | 1.69e-08 | 9 |
epithelial cell of lower respiratory tract | 1.69e-08 | 9 |
epithelial cell of alimentary canal | 2.02e-08 | 20 |
kidney tubule cell | 4.62e-07 | 10 |
nephron tubule epithelial cell | 4.62e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.24e-23 | 106 |
cell type cancer | 2.23e-17 | 143 |
squamous cell carcinoma | 4.79e-14 | 14 |
adenocarcinoma | 1.81e-08 | 25 |